Head and Neck squamous cell carcinoma_HNSC_TCGA-C9-A47Z-01A-11R-A24H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

357 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-C9-A47Z-01A-11R-A24H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD6 abhydrolase domain containing 6
ACTRT2 actin-related protein T2
ADAP2 ArfGAP with dual PH domains 2
ADGRF4 adhesion G protein-coupled receptor F4
AFG3L2 AFG3-like AAA ATPase 2
ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit
AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
AMN1 antagonist of mitotic exit network 1 homolog (S. cerevisiae)
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1
ANKRD12 ankyrin repeat domain 12
ANKRD13C ankyrin repeat domain 13C
ANKRD13D ankyrin repeat domain 13 family, member D
ANKRD30B ankyrin repeat domain 30B
ANKRD46 ankyrin repeat domain 46
APEX2 APEX nuclease (apurinic/apyrimidinic endonuclease) 2
ARHGAP5 Rho GTPase activating protein 5
ARL14 ADP-ribosylation factor-like 14
ARMT1 acidic residue methyltransferase 1
ARRDC4 arrestin domain containing 4
ASMTL-AS1 ASMTL antisense RNA 1
ATG9B autophagy related 9B
ATP7A ATPase, Cu++ transporting, alpha polypeptide
ATXN3L ataxin 3-like
ATXN7L3 ataxin 7-like 3
BCL2L2 BCL2-like 2
BEND6 BEN domain containing 6
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3
C17ORF105 chromosome 17 open reading frame 105
C6ORF120 chromosome 6 open reading frame 120
C6ORF141 chromosome 6 open reading frame 141
C7ORF33 chromosome 7 open reading frame 33
CA9 carbonic anhydrase IX
CACNG4 calcium channel, voltage-dependent, gamma subunit 4
CARD14 caspase recruitment domain family, member 14
CCNL2 cyclin L2
CD274 CD274 molecule
CD47 CD47 molecule
CDH9 cadherin 9, type 2 (T1-cadherin)
CDK17 cyclin-dependent kinase 17
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CEACAM19 carcinoembryonic antigen-related cell adhesion molecule 19
CER1 cerberus 1, DAN family BMP antagonist
CHD7 chromodomain helicase DNA binding protein 7
CHMP1B charged multivesicular body protein 1B
CLIC2 chloride intracellular channel 2
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit
CNTNAP2 contactin associated protein-like 2
COL22A1 collagen, type XXII, alpha 1
COL4A5 collagen, type IV, alpha 5
COL7A1 collagen, type VII, alpha 1
CPEB2 cytoplasmic polyadenylation element binding protein 2
CPLX1 complexin 1
CSNK1A1 casein kinase 1, alpha 1
CST8 cystatin 8 (cystatin-related epididymal specific)
CTNS cystinosin, lysosomal cystine transporter
CTSV cathepsin V
CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DEFB103B defensin, beta 103B
DKFZP586I1420 uncharacterized protein DKFZp586I1420
DLX4 distal-less homeobox 4
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNM3 dynamin 3
DPRXP4 divergent-paired related homeobox pseudogene 4
DSC1 desmocollin 1
DSC2 desmocollin 2
DSG1 desmoglein 1
DSP desmoplakin
DST dystonin
DUSP14 dual specificity phosphatase 14
DYNLT3 dynein, light chain, Tctex-type 3
ELAVL2 ELAV like neuron-specific RNA binding protein 2
EME2 essential meiotic structure-specific endonuclease subunit 2
EML1 echinoderm microtubule associated protein like 1
EML5 echinoderm microtubule associated protein like 5
ENDOU endonuclease, polyU-specific
ERMP1 endoplasmic reticulum metallopeptidase 1
ESRP1 epithelial splicing regulatory protein 1
ESRP2 epithelial splicing regulatory protein 2
FABP5 fatty acid binding protein 5 (psoriasis-associated)
FAM103A1 family with sequence similarity 103, member A1
FAM106A family with sequence similarity 106, member A
FAM138D family with sequence similarity 138, member D
FAM210A family with sequence similarity 210, member A
FAM223B family with sequence similarity 223, member B (non-protein coding)
FAM57A family with sequence similarity 57, member A
FAM83B family with sequence similarity 83, member B
FAM83G family with sequence similarity 83, member G
FEM1B fem-1 homolog b (C. elegans)
FGF13 fibroblast growth factor 13
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1
FOXN1 forkhead box N1
FREM1 FRAS1 related extracellular matrix 1
FTX FTX transcript, XIST regulator (non-protein coding)
GDNF glial cell derived neurotrophic factor
GDPD2 glycerophosphodiester phosphodiesterase domain containing 2
GJA1 gap junction protein, alpha 1, 43kDa
GJB6 gap junction protein, beta 6, 30kDa
GLO1 glyoxalase I
GLRA1 glycine receptor, alpha 1
GNB5 guanine nucleotide binding protein (G protein), beta 5
GOLGA6L10 golgin A6 family-like 10
GOLGA7B golgin A7 family, member B
GRIK2 glutamate receptor, ionotropic, kainate 2
GRIPAP1 GRIP1 associated protein 1
GSDMC gasdermin C
GTPBP2 GTP binding protein 2
HCCS holocytochrome c synthase
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1
HEPHL1 hephaestin-like 1
HES5 hes family bHLH transcription factor 5
HIST1H3E histone cluster 1, H3e
HOOK1 hook microtubule-tethering protein 1
HOXC13 homeobox C13
HSPA12A heat shock 70kDa protein 12A
HYAL4 hyaluronoglucosaminidase 4
HYALP1 hyaluronoglucosaminidase pseudogene 1
IDS iduronate 2-sulfatase
IFNA4 interferon, alpha 4
IFNA8 interferon, alpha 8
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2
IL1F10 interleukin 1 family, member 10 (theta)
IL33 interleukin 33
IL36G interleukin 36, gamma
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2
INE1 inactivation escape 1 (non-protein coding)
INTS4P1 integrator complex subunit 4 pseudogene 1
ITGAV integrin, alpha V
JAK2 Janus kinase 2
JUP junction plakoglobin
KCNK10 potassium channel, two pore domain subfamily K, member 10
KDM1B lysine (K)-specific demethylase 1B
KDM2A lysine (K)-specific demethylase 2A
KDM4C lysine (K)-specific demethylase 4C
KDM5C lysine (K)-specific demethylase 5C
KDM6A lysine (K)-specific demethylase 6A
KIAA1033 KIAA1033
KIAA2026 KIAA2026
KIF17 kinesin family member 17
KIFC2 kinesin family member C2
KLF8 Kruppel-like factor 8
KRT1 keratin 1, type II
KRT10 keratin 10, type I
KRT2 keratin 2, type II
KRT37 keratin 37, type I
KRT6A keratin 6A, type II
KRT6B keratin 6B, type II
KRT6C keratin 6C, type II
KRT75 keratin 75, type II
LAMP2 lysosomal-associated membrane protein 2
LCE1E late cornified envelope 1E
LCE3D late cornified envelope 3D
LCE3E late cornified envelope 3E
LELP1 late cornified envelope-like proline-rich 1
LINC00482 long intergenic non-protein coding RNA 482
LINC01555 long intergenic non-protein coding RNA 1555
LINC01559 long intergenic non-protein coding RNA 1559
LOC340074 uncharacterized LOC340074
LOC650293 seven transmembrane helix receptor
LOC729609 uncharacterized LOC729609
LOC91450 uncharacterized LOC91450
LPIN3 lipin 3
LRRC16B leucine rich repeat containing 16B
LURAP1L leucine rich adaptor protein 1-like
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAGEA3 melanoma antigen family A3
MAP2K4 mitogen-activated protein kinase kinase 4
MAPK6 mitogen-activated protein kinase 6
MAPRE2 microtubule-associated protein, RP/EB family, member 2
MED14 mediator complex subunit 14
MINK1 misshapen-like kinase 1
MIR17HG miR-17-92 cluster host gene
MMP17 matrix metallopeptidase 17 (membrane-inserted)
MORC3 MORC family CW-type zinc finger 3
MORF4L2 mortality factor 4 like 2
MOSPD1 motile sperm domain containing 1
MPI mannose phosphate isomerase
MPPE1 metallophosphoesterase 1
MS4A10 membrane-spanning 4-domains, subfamily A, member 10
MTAP methylthioadenosine phosphorylase
MTM1 myotubularin 1
MUS81 MUS81 structure-specific endonuclease subunit
MYBPC3 myosin binding protein C, cardiac
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric
MYL12B myosin, light chain 12B, regulatory
MYO1H myosin IH
MYO5A myosin VA (heavy chain 12, myoxin)
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma
NAPSA napsin A aspartic peptidase
NDEL1 nudE neurodevelopment protein 1-like 1
NDRG1 N-myc downstream regulated 1
NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding)
NELL2 NEL-like 2 (chicken)
NEU2 sialidase 2 (cytosolic sialidase)
NOD2 nucleotide-binding oligomerization domain containing 2
NPEPPS aminopeptidase puromycin sensitive
NRBP2 nuclear receptor binding protein 2
NSG1 neuron specific gene family member 1
NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
OGT O-linked N-acetylglucosamine (GlcNAc) transferase
OR10H1 olfactory receptor, family 10, subfamily H, member 1
OR10H2 olfactory receptor, family 10, subfamily H, member 2
OR10H5 olfactory receptor, family 10, subfamily H, member 5
OR14I1 olfactory receptor, family 14, subfamily I, member 1
OR2L1P olfactory receptor, family 2, subfamily L, member 1 pseudogene
OR52L1 olfactory receptor, family 52, subfamily L, member 1
OSBPL2 oxysterol binding protein-like 2
OTUD6B OTU domain containing 6B
PACS1 phosphofurin acidic cluster sorting protein 1
PAEP progestagen-associated endometrial protein
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
PAPD5 PAP associated domain containing 5
PAQR5 progestin and adipoQ receptor family member V
PAWR PRKC, apoptosis, WT1, regulator
PCDHGC5 protocadherin gamma subfamily C, 5
PCF11 PCF11 cleavage and polyadenylation factor subunit
PCGF3 polycomb group ring finger 3
PCYT1A phosphate cytidylyltransferase 1, choline, alpha
PDK3 pyruvate dehydrogenase kinase, isozyme 3
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1
PERP PERP, TP53 apoptosis effector
PGK1 phosphoglycerate kinase 1
PHEX phosphate regulating endopeptidase homolog, X-linked
PIGA phosphatidylinositol glycan anchor biosynthesis, class A
PIP5KL1 phosphatidylinositol-4-phosphate 5-kinase-like 1
PITPNM3 PITPNM family member 3
PLA2G2E phospholipase A2, group IIE
PLA2G2F phospholipase A2, group IIF
PLA2G4E phospholipase A2, group IVE
PLCD1 phospholipase C, delta 1
PLCZ1 phospholipase C, zeta 1
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein
PLSCR3 phospholipid scramblase 3
PMFBP1 polyamine modulated factor 1 binding protein 1
PPARD peroxisome proliferator-activated receptor delta
PPIF peptidylprolyl isomerase F
PPP1R21 protein phosphatase 1, regulatory subunit 21
PPP3R2 protein phosphatase 3, regulatory subunit B, beta
PPP4R1 protein phosphatase 4, regulatory subunit 1
PPT2 palmitoyl-protein thioesterase 2
PRICKLE3 prickle homolog 3 (Drosophila)
PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
PRMT3 protein arginine methyltransferase 3
PTPN12 protein tyrosine phosphatase, non-receptor type 12
PTPN2 protein tyrosine phosphatase, non-receptor type 2
PTPN20 protein tyrosine phosphatase, non-receptor type 20
PTPRD protein tyrosine phosphatase, receptor type, D
RAB12 RAB12, member RAS oncogene family
RAB30 RAB30, member RAS oncogene family
RAB40C RAB40C, member RAS oncogene family
RAB6A RAB6A, member RAS oncogene family
RAB6C RAB6C, member RAS oncogene family
RAB9A RAB9A, member RAS oncogene family
RALBP1 ralA binding protein 1
RANBP6 RAN binding protein 6
RBM44 RNA binding motif protein 44
RCL1 RNA terminal phosphate cyclase-like 1
RIC1 RAB6A GEF complex partner 1
RNASE7 ribonuclease, RNase A family, 7
RNF11 ring finger protein 11
RNF222 ring finger protein 222
RNMT RNA (guanine-7-) methyltransferase
RPE ribulose-5-phosphate-3-epimerase
RPE65 retinal pigment epithelium-specific protein 65kDa
RPL36A ribosomal protein L36a
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3
RRAGA Ras-related GTP binding A
RTCA RNA 3'-terminal phosphate cyclase
S100A12 S100 calcium binding protein A12
SCNN1D sodium channel, non voltage gated 1 delta subunit
SDR9C7 short chain dehydrogenase/reductase family 9C, member 7
SEH1L SEH1-like (S. cerevisiae)
SERBP1 SERPINE1 mRNA binding protein 1
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SH3D21 SH3 domain containing 21
SHROOM2 shroom family member 2
SLC22A13 solute carrier family 22 (organic anion/urate transporter), member 13
SLC22A23 solute carrier family 22, member 23
SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2
SLC38A2 solute carrier family 38, member 2
SLC44A5 solute carrier family 44, member 5
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7
SLC5A10 solute carrier family 5 (sodium/sugar cotransporter), member 10
SLC6A11 solute carrier family 6 (neurotransmitter transporter), member 11
SLMO1 slowmo homolog 1 (Drosophila)
SNORA27 small nucleolar RNA, H/ACA box 27
SNORA52 small nucleolar RNA, H/ACA box 52
SNX16 sorting nexin 16
SOCS6 suppressor of cytokine signaling 6
SPANXN5 SPANX family, member N5
SPIN4 spindlin family, member 4
SPIRE1 spire-type actin nucleation factor 1
SPOPL speckle-type POZ protein-like
SPPL3 signal peptide peptidase like 3
SRCIN1 SRC kinase signaling inhibitor 1
SWAP70 SWAP switching B-cell complex 70kDa subunit
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2
TAB3 TGF-beta activated kinase 1/MAP3K7 binding protein 3
TBC1D21 TBC1 domain family, member 21
TBC1D26 TBC1 domain family, member 26
TBC1D28 TBC1 domain family, member 28
TBC1D3 TBC1 domain family, member 3
TBC1D32 TBC1 domain family, member 32
TBC1D3B TBC1 domain family, member 3B
TBC1D3C TBC1 domain family, member 3C
TBC1D3H TBC1 domain family, member 3H
TCP11L1 t-complex 11, testis-specific-like 1
TFE3 transcription factor binding to IGHM enhancer 3
THEM5 thioesterase superfamily member 5
TLDC1 TBC/LysM-associated domain containing 1
TM4SF19 transmembrane 4 L six family member 19
TM4SF4 transmembrane 4 L six family member 4
TMEM261 transmembrane protein 261
TMEM64 transmembrane protein 64
TMEM65 transmembrane protein 65
TMEM89 transmembrane protein 89
TMEM95 transmembrane protein 95
TMPRSS15 transmembrane protease, serine 15
TPRG1L tumor protein p63 regulated 1-like
TRAPPC2 trafficking protein particle complex 2
TRIML1 tripartite motif family-like 1
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TRPV3 transient receptor potential cation channel, subfamily V, member 3
TSSK4 testis-specific serine kinase 4
TUBB6 tubulin, beta 6 class V
TXLNG taxilin gamma
UBE2E2 ubiquitin-conjugating enzyme E2E 2
UBQLN2 ubiquilin 2
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
ULK1 unc-51 like autophagy activating kinase 1
ULK2 unc-51 like autophagy activating kinase 2
USP2 ubiquitin specific peptidase 2
USP43 ubiquitin specific peptidase 43
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VIPR1 vasoactive intestinal peptide receptor 1
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae)
VSIG8 V-set and immunoglobulin domain containing 8
WDR44 WD repeat domain 44
WSB1 WD repeat and SOCS box containing 1
WWP1 WW domain containing E3 ubiquitin protein ligase 1
XG Xg blood group
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase
XKRX XK, Kell blood group complex subunit-related, X-linked
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
ZBED6CL ZBED6 C-terminal like
ZC3H12C zinc finger CCCH-type containing 12C
ZDHHC21 zinc finger, DHHC-type containing 21
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZNF212 zinc finger protein 212
ZNF664 zinc finger protein 664
ZNF770 zinc finger protein 770
ZNF841 zinc finger protein 841

low expression

Symbol Name
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5