Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-6870-01A-11R-1873-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
Similar Terms
Downloads & Tools

Genes

411 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-6870-01A-11R-1873-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AAED1 AhpC/TSA antioxidant enzyme domain containing 1
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ABT1 activator of basal transcription 1
ACKR3 atypical chemokine receptor 3
ACTB actin, beta
ADAM6 ADAM metallopeptidase domain 6 (pseudogene)
ADCK2 aarF domain containing kinase 2
ADK adenosine kinase
AGFG1 ArfGAP with FG repeats 1
AJUBA ajuba LIM protein
AKR1B15 aldo-keto reductase family 1, member B15
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
ANKRD49 ankyrin repeat domain 49
AP5Z1 adaptor-related protein complex 5, zeta 1 subunit
APH1A APH1A gamma secretase subunit
ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
ARF1 ADP-ribosylation factor 1
ARF6 ADP-ribosylation factor 6
ARL4D ADP-ribosylation factor-like 4D
ARL8A ADP-ribosylation factor-like 8A
ARRDC1 arrestin domain containing 1
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
ATF6B activating transcription factor 6 beta
ATG4B autophagy related 4B, cysteine peptidase
ATG9A autophagy related 9A
ATL1 atlastin GTPase 1
AUP1 ancient ubiquitous protein 1
B3GALTL beta 1,3-galactosyltransferase-like
B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
BASP1 brain abundant, membrane attached signal protein 1
BCAP31 B-cell receptor-associated protein 31
BLOC1S2 biogenesis of lysosomal organelles complex-1, subunit 2
BRF2 BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit
BTNL3 butyrophilin-like 3
C11ORF95 chromosome 11 open reading frame 95
C14ORF166 chromosome 14 open reading frame 166
C1ORF106 chromosome 1 open reading frame 106
C1ORF21 chromosome 1 open reading frame 21
C1ORF43 chromosome 1 open reading frame 43
C7ORF31 chromosome 7 open reading frame 31
C9ORF69 chromosome 9 open reading frame 69
CAPN1 calpain 1, (mu/I) large subunit
CAPN10 calpain 10
CASP12 caspase 12 (gene/pseudogene)
CAV2 caveolin 2
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CCDC105 coiled-coil domain containing 105
CCDC115 coiled-coil domain containing 115
CCNDBP1 cyclin D-type binding-protein 1
CD276 CD276 molecule
CD47 CD47 molecule
CD79A CD79a molecule, immunoglobulin-associated alpha
CDCP2 CUB domain containing protein 2
CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase
CDK9 cyclin-dependent kinase 9
CDRT15P1 CMT1A duplicated region transcript 15 pseudogene 1
CEBPD CCAAT/enhancer binding protein (C/EBP), delta
CELA2A chymotrypsin-like elastase family, member 2A
CELA2B chymotrypsin-like elastase family, member 2B
CELA3A chymotrypsin-like elastase family, member 3A
CELA3B chymotrypsin-like elastase family, member 3B
CERS2 ceramide synthase 2
CERS3 ceramide synthase 3
CLEC4M C-type lectin domain family 4, member M
CLN5 ceroid-lipofuscinosis, neuronal 5
CLPS colipase, pancreatic
CNGB1 cyclic nucleotide gated channel beta 1
CNKSR1 connector enhancer of kinase suppressor of Ras 1
CNOT2 CCR4-NOT transcription complex, subunit 2
COL17A1 collagen, type XVII, alpha 1
COPS8 COP9 signalosome subunit 8
CORO1B coronin, actin binding protein, 1B
CORO7 coronin 7
CPA1 carboxypeptidase A1 (pancreatic)
CPB1 carboxypeptidase B1 (tissue)
CPNE5 copine V
CRTC2 CREB regulated transcription coactivator 2
CTDSP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
CTRB2 chymotrypsinogen B2
CTRC chymotrypsin C (caldecrin)
CXCL14 chemokine (C-X-C motif) ligand 14
CYBA cytochrome b-245, alpha polypeptide
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1
DCTN5 dynactin 5 (p25)
DDHD2 DDHD domain containing 2
DEDD death effector domain containing
DEGS1 delta(4)-desaturase, sphingolipid 1
DGAT1 diacylglycerol O-acyltransferase 1
DIRC2 disrupted in renal carcinoma 2
DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding)
DLEU2L deleted in lymphocytic leukemia 2-like
DNAAF2 dynein, axonemal, assembly factor 2
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNAJC4 DnaJ (Hsp40) homolog, subfamily C, member 4
DNASE1L1 deoxyribonuclease I-like 1
DNM1P35 dynamin 1 pseudogene 35
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1
DOLK dolichol kinase
DPYSL4 dihydropyrimidinase-like 4
DQX1 DEAQ box RNA-dependent ATPase 1
DSPP dentin sialophosphoprotein
DUSP9 dual specificity phosphatase 9
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1
EFNA1 ephrin-A1
EI24 etoposide induced 2.4
ELL elongation factor RNA polymerase II
EML3 echinoderm microtubule associated protein like 3
ENAH enabled homolog (Drosophila)
ERLIN2 ER lipid raft associated 2
EXOC3L2 exocyst complex component 3-like 2
EXOC4 exocyst complex component 4
F2RL3 coagulation factor II (thrombin) receptor-like 3
FADS3 fatty acid desaturase 3
FAM134A family with sequence similarity 134, member A
FAM183B acyloxyacyl hydrolase (neutrophil)
FAM213A family with sequence similarity 213, member A
FAM46C family with sequence similarity 46, member C
FAM89A family with sequence similarity 89, member A
FCRL5 Fc receptor-like 5
FCRLB Fc receptor-like B
FKBP11 FK506 binding protein 11, 19 kDa
FLJ42627 uncharacterized LOC645644
FLOT1 flotillin 1
FOXF2 forkhead box F2
FPGS folylpolyglutamate synthase
FRMD6 FERM domain containing 6
FSCN1 fascin actin-bundling protein 1
FSTL3 follistatin-like 3 (secreted glycoprotein)
FURIN furin (paired basic amino acid cleaving enzyme)
FUS FUS RNA binding protein
GABRG2 gamma-aminobutyric acid (GABA) A receptor, gamma 2
GANC glucosidase, alpha; neutral C
GATA1 GATA binding protein 1 (globin transcription factor 1)
GDPD2 glycerophosphodiester phosphodiesterase domain containing 2
GIF gastric intrinsic factor (vitamin B synthesis)
GJB2 gap junction protein, beta 2, 26kDa
GJB6 gap junction protein, beta 6, 30kDa
GKN1 gastrokine 1
GLMP glycosylated lysosomal membrane protein
GMIP GEM interacting protein
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3
GNG4 guanine nucleotide binding protein (G protein), gamma 4
GPR68 G protein-coupled receptor 68
GPR85 G protein-coupled receptor 85
GPR87 G protein-coupled receptor 87
GSTM1 glutathione S-transferase mu 1
GSTM2 glutathione S-transferase mu 2 (muscle)
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene)
GYLTL1B glycosyltransferase-like 1B
HDLBP high density lipoprotein binding protein
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
HGSNAT heparan-alpha-glucosaminide N-acetyltransferase
HIATL2 hippocampus abundant transcript-like 2
HIGD2B HIG1 hypoxia inducible domain family, member 2B
HLA-C major histocompatibility complex, class I, C
HPS6 Hermansky-Pudlak syndrome 6
HSD17B8 hydroxysteroid (17-beta) dehydrogenase 8
HYOU1 hypoxia up-regulated 1
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IFI16 interferon, gamma-inducible protein 16
IGSF8 immunoglobulin superfamily, member 8
IL5RA interleukin 5 receptor, alpha
IMPDH1 IMP (inosine 5'-monophosphate) dehydrogenase 1
ING5 inhibitor of growth family, member 5
INPP5E inositol polyphosphate-5-phosphatase, 72 kDa
IRF4 interferon regulatory factor 4
IRX2 iroquois homeobox 2
IRX4 iroquois homeobox 4
JUNB jun B proto-oncogene
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3
KIAA0125 KIAA0125
KIAA1598
KIAA1614 KIAA1614
KIFC3 kinesin family member C3
KLF13 Kruppel-like factor 13
KLHDC2 kelch domain containing 2
KRBA1 KRAB-A domain containing 1
KTN1 kinectin 1 (kinesin receptor)
KTN1-AS1 KTN1 antisense RNA 1
LAMA5 laminin, alpha 5
LCE5A late cornified envelope 5A
LETM2 leucine zipper-EF-hand containing transmembrane protein 2
LGALS9B lectin, galactoside-binding, soluble, 9B
LIPF lipase, gastric
LOC100129550 uncharacterized LOC100129550
LOC154761 family with sequence similarity 115, member C pseudogene
LOC284009 uncharacterized LOC284009
LOC400794 uncharacterized LOC400794
LPCAT2 lysophosphatidylcholine acyltransferase 2
LPPR1 lipid phosphate phosphatase-related protein type 1
LRFN4 leucine rich repeat and fibronectin type III domain containing 4
LRR1 leucine rich repeat protein 1
LRRC3 leucine rich repeat containing 3
LRRC74A leucine rich repeat containing 74A
LSM1 LSM1, U6 small nuclear RNA associated
LTB4R2 leukotriene B4 receptor 2
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MC4R melanocortin 4 receptor
MCCD1 mitochondrial coiled-coil domain 1
MED10 mediator complex subunit 10
MED4 mediator complex subunit 4
MESDC1 mesoderm development candidate 1
MFF mitochondrial fission factor
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MMP1 matrix metallopeptidase 1
MMP13 matrix metallopeptidase 13
MMP3 matrix metallopeptidase 3
MORC2-AS1 MORC2 antisense RNA 1
MORF4 mortality factor 4 (pseudogene)
MSL3P1 male-specific lethal 3 homolog (Drosophila) pseudogene 1
MXD4 MAX dimerization protein 4
MYBL2 v-myb avian myeloblastosis viral oncogene homolog-like 2
NAP1L6 nucleosome assembly protein 1-like 6
NCS1 neuronal calcium sensor 1
NEMF nuclear export mediator factor
NFASC neurofascin
NME4 NME/NM23 nucleoside diphosphate kinase 4
NOD1 nucleotide-binding oligomerization domain containing 1
NTPCR nucleoside-triphosphatase, cancer-related
NUTM2G NUT family member 2G
NXF1 nuclear RNA export factor 1
OR10A2 olfactory receptor, family 10, subfamily A, member 2
OR1E1 olfactory receptor, family 1, subfamily E, member 1
OR1L6 olfactory receptor, family 1, subfamily L, member 6
OR5E1P olfactory receptor, family 5, subfamily E, member 1 pseudogene
OSER1 oxidative stress responsive serine-rich 1
OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6
PCGF1 polycomb group ring finger 1
PCIF1 PDX1 C-terminal inhibiting factor 1
PDCD6 programmed cell death 6
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta
PDLIM1 PDZ and LIM domain 1
PDPN podoplanin
PGA3 pepsinogen 3, group I (pepsinogen A)
PGC progastricsin (pepsinogen C)
PICALM phosphatidylinositol binding clathrin assembly protein
PIGT phosphatidylinositol glycan anchor biosynthesis, class T
PIM2 Pim-2 proto-oncogene, serine/threonine kinase
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
PLTP phospholipid transfer protein
PLVAP plasmalemma vesicle associated protein
PLXNB3 plexin B3
PNLIP pancreatic lipase
PNLIPRP2 pancreatic lipase-related protein 2
PNOC prepronociceptin
POLE2 polymerase (DNA directed), epsilon 2, accessory subunit
POLR1D polymerase (RNA) I polypeptide D, 16kDa
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
POU2F2 POU class 2 homeobox 2
PPAPDC1B phosphatidic acid phosphatase type 2 domain containing 1B
PPP1R1C protein phosphatase 1, regulatory (inhibitor) subunit 1C
PQLC3 PQ loop repeat containing 3
PROSC proline synthetase co-transcribed homolog (bacterial)
PRSS1 protease, serine, 1 (trypsin 1)
PRSS23 protease, serine, 23
PRSS3P2 protease, serine, 3 pseudogene 2
PSEN2 presenilin 2
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
PSMG1 proteasome (prosome, macropain) assembly chaperone 1
PXDC1 PX domain containing 1
PYGL phosphorylase, glycogen, liver
R3HDM4 R3H domain containing 4
RAB1B RAB1B, member RAS oncogene family
RAB38 RAB38, member RAS oncogene family
RAP1B RAP1B, member of RAS oncogene family
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
RET ret proto-oncogene
RHBDF1 rhomboid 5 homolog 1 (Drosophila)
RIN1 Ras and Rab interactor 1
RIPK3 receptor-interacting serine-threonine kinase 3
RNF126 ring finger protein 126
RNF151 ring finger protein 151
RNF216P1 ring finger protein 216 pseudogene 1
RNPEP arginyl aminopeptidase (aminopeptidase B)
RNPEPL1 arginyl aminopeptidase (aminopeptidase B)-like 1
RPL3 ribosomal protein L3
RPL36AL ribosomal protein L36a-like
RPN2 ribophorin II
RPS29 ribosomal protein S29
RPS4X ribosomal protein S4, X-linked
RPS6KA4 ribosomal protein S6 kinase, 90kDa, polypeptide 4
RRH retinal pigment epithelium-derived rhodopsin homolog
RXRA retinoid X receptor, alpha
RXRG retinoid X receptor, gamma
S100A10 S100 calcium binding protein A10
SAA3P serum amyloid A3 pseudogene
SAV1 salvador family WW domain containing protein 1
SBNO2 strawberry notch homolog 2 (Drosophila)
SCAMP5 secretory carrier membrane protein 5
SCARNA17 small Cajal body-specific RNA 17
SCYL1 SCY1-like 1 (S. cerevisiae)
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
SEPT2 septin 2
SERINC3 serine incorporator 3
SF3B4 splicing factor 3b, subunit 4, 49kDa
SFXN3 sideroflexin 3
SGSH N-sulfoglucosamine sulfohydrolase
SIN3B SIN3 transcription regulator family member B
SLC10A3 solute carrier family 10, member 3
SLC19A3 solute carrier family 19 (thiamine transporter), member 3
SLC22A23 solute carrier family 22, member 23
SLC2A7 solute carrier family 2 (facilitated glucose transporter), member 7
SLC35D2 solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2
SLC35E3 solute carrier family 35, member E3
SLC39A1 solute carrier family 39 (zinc transporter), member 1
SLC50A1 solute carrier family 50 (sugar efflux transporter), member 1
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2
SND1 staphylococcal nuclease and tudor domain containing 1
SNORA14B small nucleolar RNA, H/ACA box 14B
SNX17 sorting nexin 17
SOS2 son of sevenless homolog 2 (Drosophila)
SOX1 SRY (sex determining region Y)-box 1
SP140L SP140 nuclear body protein-like
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SPDYE4 speedy/RINGO cell cycle regulator family member E4
SPON2 spondin 2, extracellular matrix protein
SPRYD7 SPRY domain containing 7
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SRPR signal recognition particle receptor (docking protein)
SSR4 signal sequence receptor, delta
ST7-OT3 ST7 overlapping transcript 3
STAMBP STAM binding protein
STK25 serine/threonine kinase 25
STOM stomatin
SURF4 surfeit 4
SYCN syncollin
SYDE1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
SYS1 Sys1 golgi trafficking protein
SYVN1 synovial apoptosis inhibitor 1, synoviolin
TAGLN2 transgelin 2
TAS2R42 taste receptor, type 2, member 42
TBC1D2 TBC1 domain family, member 2
TBXA2R thromboxane A2 receptor
TCAF2 TRPM8 channel-associated factor 2
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3
TDRD5 tudor domain containing 5
TEAD3 TEA domain family member 3
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
TGM2 transglutaminase 2
THAP4 THAP domain containing 4
THEM4 thioesterase superfamily member 4
THSD1 thrombospondin, type I, domain containing 1
THSD1P1 thrombospondin, type I, domain containing 1 pseudogene 1
TKFC triokinase/FMN cyclase
TLR9 toll-like receptor 9
TMBIM1 transmembrane BAX inhibitor motif containing 1
TMC6 transmembrane channel-like 6
TMCO1 transmembrane and coiled-coil domains 1
TMEM133 transmembrane protein 133
TMEM14C transmembrane protein 14C
TMEM179B transmembrane protein 179B
TMEM18 transmembrane protein 18
TMEM19 transmembrane protein 19
TMEM214 transmembrane protein 214
TMEM87A transmembrane protein 87A
TNFRSF17 tumor necrosis factor receptor superfamily, member 17
TNK1 tyrosine kinase, non-receptor, 1
TOR2A torsin family 2, member A
TP53I13 tumor protein p53 inducible protein 13
TPSAB1 tryptase alpha/beta 1
TPT1 tumor protein, translationally-controlled 1
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2
TRADD TNFRSF1A-associated via death domain
TREM1 triggering receptor expressed on myeloid cells 1
TRIM6 tripartite motif containing 6
TSSK1B testis-specific serine kinase 1B
TTC38 tetratricopeptide repeat domain 38
TTLL8 tubulin tyrosine ligase-like family member 8
TXNDC11 thioredoxin domain containing 11
UBC ubiquitin C
UBE2C ubiquitin-conjugating enzyme E2C
UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1
UNC45A unc-45 homolog A (C. elegans)
USP40 ubiquitin specific peptidase 40
USP43 ubiquitin specific peptidase 43
VANGL2 VANGL planar cell polarity protein 2
VCPKMT valosin containing protein lysine (K) methyltransferase
VEGFC vascular endothelial growth factor C
VIMP VCP-interacting membrane selenoprotein
WDFY2 WD repeat and FYVE domain containing 2
WDR91 WD repeat domain 91
WHSC1L1 Wolf-Hirschhorn syndrome candidate 1-like 1
WIPI2 WD repeat domain, phosphoinositide interacting 2
XBP1 X-box binding protein 1
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
ZC3HAV1 zinc finger CCCH-type, antiviral 1
ZFC3H1 zinc finger, C3H1-type containing
ZNF254 zinc finger protein 254
ZNF282 zinc finger protein 282
ZNF319 zinc finger protein 319
ZNF425 zinc finger protein 425
ZNF655 zinc finger protein 655
ZNF703 zinc finger protein 703
ZNF708 zinc finger protein 708
ZNF746 zinc finger protein 746
ZNF777 zinc finger protein 777
ZSWIM1 zinc finger, SWIM-type containing 1
ZSWIM3 zinc finger, SWIM-type containing 3

low expression

Symbol Name
MTIF2 mitochondrial translational initiation factor 2
NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae)