Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-4077-01B-01R-1436-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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Genes

436 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-4077-01B-01R-1436-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1
ABHD17C abhydrolase domain containing 17C
ACAD9 acyl-CoA dehydrogenase family, member 9
ACSL5 acyl-CoA synthetase long-chain family member 5
ACY3 aminoacylase 3
ADAM28 ADAM metallopeptidase domain 28
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional)
ADD2 adducin 2 (beta)
ADGRE1 adhesion G protein-coupled receptor E1
ADGRE5 adhesion G protein-coupled receptor E5
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
ALOX5 arachidonate 5-lipoxygenase
ALOX5AP arachidonate 5-lipoxygenase-activating protein
ALPK1 alpha-kinase 1
AMDHD1 amidohydrolase domain containing 1
ANKDD1A ankyrin repeat and death domain containing 1A
ANXA7 annexin A7
AP2M1 adaptor-related protein complex 2, mu 1 subunit
APOBEC3C apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
APOL4 apolipoprotein L, 4
ARAP3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
ARPIN actin-related protein 2/3 complex inhibitor
ARSD arylsulfatase D
ASF1B anti-silencing function 1B histone chaperone
ASTE1 asteroid homolog 1 (Drosophila)
ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
ATP8B3 ATPase, aminophospholipid transporter, class I, type 8B, member 3
B2M beta-2-microglobulin
B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1
BEGAIN brain-enriched guanylate kinase-associated
BHMT betaine--homocysteine S-methyltransferase
BMI1 BMI1 proto-oncogene, polycomb ring finger
BTC betacellulin
BTN3A2 butyrophilin, subfamily 3, member A2
C15ORF39 chromosome 15 open reading frame 39
C1QTNF2 C1q and tumor necrosis factor related protein 2
C22ORF24 chromosome 22 open reading frame 24
C3ORF17 chromosome 3 open reading frame 17
C3ORF70 chromosome 3 open reading frame 70
C4ORF51 chromosome 4 open reading frame 51
C6ORF223 chromosome 6 open reading frame 223
C9ORF3 chromosome 9 open reading frame 3
C9ORF89 chromosome 9 open reading frame 89
CAMK4 calcium/calmodulin-dependent protein kinase IV
CAPG capping protein (actin filament), gelsolin-like
CASP6 caspase 6, apoptosis-related cysteine peptidase
CASP7 caspase 7, apoptosis-related cysteine peptidase
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3
CBX2 chromobox homolog 2
CCDC50 coiled-coil domain containing 50
CCNF cyclin F
CCNYL1 cyclin Y-like 1
CCR3 chemokine (C-C motif) receptor 3
CD101 CD101 molecule
CD1A CD1a molecule
CD47 CD47 molecule
CDCA4 cell division cycle associated 4
CDK16 cyclin-dependent kinase 16
CDK2 cyclin-dependent kinase 2
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CEMIP cell migration inducing protein, hyaluronan binding
CENPW centromere protein W
CFB complement factor B
CFI complement factor I
CHP2 calcineurin-like EF-hand protein 2
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CHRNB4 cholinergic receptor, nicotinic, beta 4 (neuronal)
CIB2 calcium and integrin binding family member 2
CLC Charcot-Leyden crystal galectin
COMMD2 COMM domain containing 2
COMT catechol-O-methyltransferase
COPG1 coatomer protein complex, subunit gamma 1
CORO2B coronin, actin binding protein, 2B
CP ceruloplasmin (ferroxidase)
CPEB1 cytoplasmic polyadenylation element binding protein 1
CREG2 cellular repressor of E1A-stimulated genes 2
CSF2RA colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
CSN1S1 casein alpha s1
CTSH cathepsin H
CX3CL1 chemokine (C-X3-C motif) ligand 1
CX3CR1 chemokine (C-X3-C motif) receptor 1
CXADR coxsackie virus and adenovirus receptor
CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2
CXORF38 chromosome X open reading frame 38
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1
DBR1 debranching RNA lariats 1
DCLRE1B DNA cross-link repair 1B
DDB2 damage-specific DNA binding protein 2, 48kDa
DIRC2 disrupted in renal carcinoma 2
DIS3L DIS3 like exosome 3'-5' exoribonuclease
DMBX1 diencephalon/mesencephalon homeobox 1
DMGDH dimethylglycine dehydrogenase
DMTN dematin actin binding protein
DNM1 dynamin 1
DOLPP1 dolichyldiphosphatase 1
DTX3L deltex 3 like, E3 ubiquitin ligase
EAF2 ELL associated factor 2
EEFSEC eukaryotic elongation factor, selenocysteine-tRNA-specific
EFCAB11 EF-hand calcium binding domain 11
EFCAB5 EF-hand calcium binding domain 5
EFHD2 EF-hand domain family, member D2
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
EIF1AX eukaryotic translation initiation factor 1A, X-linked
ELAVL4 ELAV like neuron-specific RNA binding protein 4
EMP2 epithelial membrane protein 2
EPHB2 EPH receptor B2
EPHB3 EPH receptor B3
ERAP1 endoplasmic reticulum aminopeptidase 1
ERLIN1 ER lipid raft associated 1
EYA4 EYA transcriptional coactivator and phosphatase 4
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase)
FAM20A family with sequence similarity 20, member A
FANCI Fanconi anemia, complementation group I
FBXW12 F-box and WD repeat domain containing 12
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
FCHO1 FCH domain only 1
FLNA filamin A, alpha
FLOT2 flotillin 2
FMO4 flavin containing monooxygenase 4
FNTB farnesyltransferase, CAAX box, beta
FOXE3 forkhead box E3
FOXI2 forkhead box I2
FOXI3 forkhead box I3
FRRS1 ferric-chelate reductase 1
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GABRD gamma-aminobutyric acid (GABA) A receptor, delta
GABRQ gamma-aminobutyric acid (GABA) A receptor, theta
GAL3ST4 galactose-3-O-sulfotransferase 4
GATA1 GATA binding protein 1 (globin transcription factor 1)
GATA4 GATA binding protein 4
GCA grancalcin, EF-hand calcium binding protein
GEMIN8 gem (nuclear organelle) associated protein 8
GIPC2 GIPC PDZ domain containing family, member 2
GIPC3 GIPC PDZ domain containing family, member 3
GKN1 gastrokine 1
GPA33 glycoprotein A33 (transmembrane)
GPR37 G protein-coupled receptor 37 (endothelin receptor type B-like)
GPR68 G protein-coupled receptor 68
GPR85 G protein-coupled receptor 85
GPR87 G protein-coupled receptor 87
GRM7 glutamate receptor, metabotropic 7
GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa
GTPBP8 GTP-binding protein 8 (putative)
GUSBP3 glucuronidase, beta pseudogene 3
HACD2 3-hydroxyacyl-CoA dehydratase 2
HAND1 heart and neural crest derivatives expressed 1
HAPLN3 hyaluronan and proteoglycan link protein 3
HCK HCK proto-oncogene, Src family tyrosine kinase
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1
HFE hemochromatosis
HLA-A major histocompatibility complex, class I, A
HLA-B major histocompatibility complex, class I, B
HLA-C major histocompatibility complex, class I, C
HLA-DPB2 major histocompatibility complex, class II, DP beta 2 (pseudogene)
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-DRB5 major histocompatibility complex, class II, DR beta 5
HLA-F major histocompatibility complex, class I, F
HMCES 5-hydroxymethylcytosine (hmC) binding, ES cell-specific
HNF4G hepatocyte nuclear factor 4, gamma
HOXD1 homeobox D1
HOXD13 homeobox D13
HPGDS hematopoietic prostaglandin D synthase
HPS3 Hermansky-Pudlak syndrome 3
HPS6 Hermansky-Pudlak syndrome 6
HRH2 histamine receptor H2
HTR3C 5-hydroxytryptamine (serotonin) receptor 3C, ionotropic
HTR6 5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled
HYKK hydroxylysine kinase
IDO1 indoleamine 2,3-dioxygenase 1
IFITM2 interferon induced transmembrane protein 2
IFNA8 interferon, alpha 8
IGSF1 immunoglobulin superfamily, member 1
IL10RB interleukin 10 receptor, beta
IL15RA interleukin 15 receptor, alpha
IL22RA2 interleukin 22 receptor, alpha 2
IL32 interleukin 32
ILDR1 immunoglobulin-like domain containing receptor 1
ILDR2 immunoglobulin-like domain containing receptor 2
INPP1 inositol polyphosphate-1-phosphatase
INTS7 integrator complex subunit 7
IQSEC2 IQ motif and Sec7 domain 2
ISY1 ISY1 splicing factor homolog (S. cerevisiae)
ITGB6 integrin, beta 6
ITPRIPL1 inositol 1,4,5-trisphosphate receptor interacting protein-like 1
JDP2 Jun dimerization protein 2
KBTBD12 kelch repeat and BTB (POZ) domain containing 12
KCNA10 potassium channel, voltage gated shaker related subfamily A, member 10
KCNK17 potassium channel, two pore domain subfamily K, member 17
KCNS1 potassium voltage-gated channel, modifier subfamily S, member 1
KDM6A lysine (K)-specific demethylase 6A
KIAA1524 KIAA1524
KIF1A kinesin family member 1A
KIF20A kinesin family member 20A
KIF23 kinesin family member 23
KLF14 Kruppel-like factor 14
KLHL35 kelch-like family member 35
KPNA1 karyopherin alpha 1 (importin alpha 5)
LCP1 lymphocyte cytosolic protein 1 (L-plastin)
LHFPL4 lipoma HMGIC fusion partner-like 4
LHX2 LIM homeobox 2
LIN52 lin-52 DREAM MuvB core complex component
LINC00242 long intergenic non-protein coding RNA 242
LINC00574 long intergenic non-protein coding RNA 574
LINC01565 long intergenic non-protein coding RNA 1565
LITAF lipopolysaccharide-induced TNF factor
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LOC100126784 uncharacterized LOC100126784
LOC641367 cyclin Y-like 1 pseudogene
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOX lysyl oxidase
LRCH2 leucine-rich repeats and calponin homology (CH) domain containing 2
LRG1 leucine-rich alpha-2-glycoprotein 1
LRRC16A leucine rich repeat containing 16A
LRRC28 leucine rich repeat containing 28
LRRC37A3 leucine rich repeat containing 37, member A3
LRRN2 leucine rich repeat neuronal 2
LSR lipolysis stimulated lipoprotein receptor
LY75 lymphocyte antigen 75
LYN LYN proto-oncogene, Src family tyrosine kinase
LYPD1 LY6/PLAUR domain containing 1
MAGEA1 melanoma antigen family A1
MAP2K1 mitogen-activated protein kinase kinase 1
MBD4 methyl-CpG binding domain protein 4
MCM2 minichromosome maintenance complex component 2
MCM5 minichromosome maintenance complex component 5
MDK midkine (neurite growth-promoting factor 2)
MED14 mediator complex subunit 14
MEIOB meiosis specific with OB domains
MESDC2 mesoderm development candidate 2
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
MFSD4 major facilitator superfamily domain containing 4
MICB MHC class I polypeptide-related sequence B
MORF4 mortality factor 4 (pseudogene)
MORF4L1 mortality factor 4 like 1
MR1 major histocompatibility complex, class I-related
MSL3 male-specific lethal 3 homolog (Drosophila)
MSN moesin
MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase
MTHFS 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
MUC1 mucin 1, cell surface associated
MYRF myelin regulatory factor
NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit
NAGA N-acetylgalactosaminidase, alpha-
NCAM2 neural cell adhesion molecule 2
NCEH1 neutral cholesterol ester hydrolase 1
NDUFB4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa
NEUROG1 neurogenin 1
NMB neuromedin B
NOTO notochord homeobox
NPTN neuroplastin
NRM nurim (nuclear envelope membrane protein)
NUBP1 nucleotide binding protein 1
OR1F1 olfactory receptor, family 1, subfamily F, member 1
OR2B3 olfactory receptor, family 2, subfamily B, member 3
OSBPL11 oxysterol binding protein-like 11
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6
P3H2 prolyl 3-hydroxylase 2
PAGE4 P antigen family, member 4 (prostate associated)
PAQR4 progestin and adipoQ receptor family member IV
PARP4 poly (ADP-ribose) polymerase family, member 4
PARP9 poly (ADP-ribose) polymerase family, member 9
PAX7 paired box 7
PDE4A phosphodiesterase 4A, cAMP-specific
PDIA5 protein disulfide isomerase family A, member 5
PDX1 pancreatic and duodenal homeobox 1
PGM2L1 phosphoglucomutase 2-like 1
PHEX phosphate regulating endopeptidase homolog, X-linked
PHF19 PHD finger protein 19
PIGH phosphatidylinositol glycan anchor biosynthesis, class H
PIGZ phosphatidylinositol glycan anchor biosynthesis, class Z
PKM pyruvate kinase, muscle
PLA2G2C phospholipase A2, group IIC
PLAU plasminogen activator, urokinase
PLCE1 phospholipase C, epsilon 1
PLEKHA6 pleckstrin homology domain containing, family A member 6
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
PLS1 plastin 1
PLSCR1 phospholipid scramblase 1
PLSCR4 phospholipid scramblase 4
PLXNB3 plexin B3
PNCK pregnancy up-regulated nonubiquitous CaM kinase
POLD3 polymerase (DNA-directed), delta 3, accessory subunit
POM121L2 POM121 transmembrane nucleoporin-like 2
POU2F3 POU class 2 homeobox 3
POU4F2 POU class 4 homeobox 2
PRC1 protein regulator of cytokinesis 1
PROM2 prominin 2
PROX2 prospero homeobox 2
PRR26 proline rich 26
PRSS21 protease, serine, 21 (testisin)
PRTFDC1 phosphoribosyl transferase domain containing 1
PSKH2 protein serine kinase H2
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
PSTPIP2 proline-serine-threonine phosphatase interacting protein 2
PTAFR platelet-activating factor receptor
PTPN3 protein tyrosine phosphatase, non-receptor type 3
PTPN9 protein tyrosine phosphatase, non-receptor type 9
PVRL3 poliovirus receptor-related 3
QRFPR pyroglutamylated RFamide peptide receptor
RAB27A RAB27A, member RAS oncogene family
RABL3 RAB, member of RAS oncogene family-like 3
RAD51B RAD51 paralog B
RAX retina and anterior neural fold homeobox
RBBP7 retinoblastoma binding protein 7
RBP1 retinol binding protein 1, cellular
RDH10 retinol dehydrogenase 10 (all-trans)
REC8 REC8 meiotic recombination protein
RETNLB resistin like beta
RHBDF2 rhomboid 5 homolog 2 (Drosophila)
RHOC ras homolog family member C
RIN3 Ras and Rab interactor 3
RIPK3 receptor-interacting serine-threonine kinase 3
RMI2 RecQ mediated genome instability 2
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
RNASE3 ribonuclease, RNase A family, 3
RNF13 ring finger protein 13
RPA1 replication protein A1, 70kDa
RPA2 replication protein A2, 32kDa
RPL39L ribosomal protein L39-like
RPN1 ribophorin I
RPP25 ribonuclease P/MRP 25kDa subunit
RSRC1 arginine/serine-rich coiled-coil 1
RTN4RL2 reticulon 4 receptor-like 2
RYK receptor-like tyrosine kinase
S100B S100 calcium binding protein B
SBSPON somatomedin B and thrombospondin, type 1 domain containing
SCPEP1 serine carboxypeptidase 1
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
SELT selenoprotein T
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
SERHL serine hydrolase-like (pseudogene)
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SESTD1 SEC14 and spectrin domains 1
SH2D4B SH2 domain containing 4B
SHE Src homology 2 domain containing E
SHISA5 shisa family member 5
SHROOM2 shroom family member 2
SIDT1 SID1 transmembrane family, member 1
SIGLEC5 sialic acid binding Ig-like lectin 5
SIGLECL1 SIGLEC family like 1
SKA1 spindle and kinetochore associated complex subunit 1
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7
SLC35A5 solute carrier family 35, member A5
SLC41A2 solute carrier family 41 (magnesium transporter), member 2
SLC51A solute carrier family 51, alpha subunit
SLC8A2 solute carrier family 8 (sodium/calcium exchanger), member 2
SMC1A structural maintenance of chromosomes 1A
SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B
SNN stannin
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA15 small nucleolar RNA, H/ACA box 15
SNUPN snurportin 1
SNX4 sorting nexin 4
SNX7 sorting nexin 7
SOHLH1 spermatogenesis and oogenesis specific basic helix-loop-helix 1
SOX30 SRY (sex determining region Y)-box 30
SPDYE4 speedy/RINGO cell cycle regulator family member E4
SPESP1 sperm equatorial segment protein 1
SPOCD1 SPOC domain containing 1
STAG1 stromal antigen 1
STAG3 stromal antigen 3
STOM stomatin
STOML1 stomatin (EPB72)-like 1
STS steroid sulfatase (microsomal), isozyme S
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
SULT1A3 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3
SUMO3 small ubiquitin-like modifier 3
SUSD1 sushi domain containing 1
SUSD3 sushi domain containing 3
SUSD6 sushi domain containing 6
SYAP1 synapse associated protein 1
SYNGR3 synaptogyrin 3
TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa
TBPL2 TATA box binding protein like 2
TCEANC transcription elongation factor A (SII) N-terminal and central domain containing
TCF19 transcription factor 19
TCN2 transcobalamin II
TDRD10 tudor domain containing 10
TDRD7 tudor domain containing 7
TEAD2 TEA domain family member 2
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
THOC6 THO complex 6
TICAM2 toll-like receptor adaptor molecule 2
TK1 thymidine kinase 1, soluble
TLR3 toll-like receptor 3
TMEM106C transmembrane protein 106C
TMEM144 transmembrane protein 144
TMEM173 transmembrane protein 173
TMEM187 transmembrane protein 187
TMEM37 transmembrane protein 37
TMEM39A transmembrane protein 39A
TMEM92 transmembrane protein 92
TMPRSS3 transmembrane protease, serine 3
TNFRSF9 tumor necrosis factor receptor superfamily, member 9
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNIP3 TNFAIP3 interacting protein 3
TOPBP1 topoisomerase (DNA) II binding protein 1
TOR4A torsin family 4, member A
TRIM10 tripartite motif containing 10
TRIM15 tripartite motif containing 15
TRIM17 tripartite motif containing 17
TRIM59 tripartite motif containing 59
TRIM6 tripartite motif containing 6
TRIM6-TRIM34 TRIM6-TRIM34 readthrough
TSPAN15 tetraspanin 15
TXNRD3NB thioredoxin reductase 3 neighbor
UBA1 ubiquitin-like modifier activating enzyme 1
UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative)
UBTFL1 upstream binding transcription factor, RNA polymerase I-like 1
ULK4P2 ULK4 pseudogene 2
UMPS uridine monophosphate synthetase
USP44 ubiquitin specific peptidase 44
USP9X ubiquitin specific peptidase 9, X-linked
VASP vasodilator-stimulated phosphoprotein
VSTM5 V-set and transmembrane domain containing 5
VWA2 von Willebrand factor A domain containing 2
WBSCR28 Williams-Beuren syndrome chromosome region 28
XKR5 XK, Kell blood group complex subunit-related family, member 5
YBX2 Y box binding protein 2
ZFAND6 zinc finger, AN1-type domain 6
ZFPM2 zinc finger protein, FOG family member 2
ZFR2 zinc finger RNA binding protein 2
ZNF385B zinc finger protein 385B
ZNF467 zinc finger protein 467
ZNF484 zinc finger protein 484
ZPBP zona pellucida binding protein
ZSWIM5 zinc finger, SWIM-type containing 5
ZWILCH zwilch kinetochore protein

low expression

Symbol Name
BRD7 bromodomain containing 7
CSNK1D casein kinase 1, delta
FOXK2 forkhead box K2