HCC1937 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

79 genes with high or low copy number in HCC1937 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
LOC283914 2.41451
SCRIB scribbled planar cell polarity protein 2.39327
EPPK1 epiplakin 1 2.39327
NRBP2 nuclear receptor binding protein 2 2.39327
DPPA2P3 developmental pluripotency associated 2 pseudogene 3 2.39327
MIR937 microRNA 937 2.39327
PUF60 poly-U binding splicing factor 60KDa 2.39327
ZNF252P-AS1 ZNF252P antisense RNA 1 2.36889
RPL8 ribosomal protein L8 2.36889
ZNF16 zinc finger protein 16 2.36889
MFSD3 major facilitator superfamily domain containing 3 2.36889
ZNF7 zinc finger protein 7 2.36889
LOC647323 uncharacterized LOC647323 2.36889
ZNF34 zinc finger protein 34 2.36889
ARHGAP39 Rho GTPase activating protein 39 2.36889
COMMD5 COMM domain containing 5 2.36889
LRRC24 leucine rich repeat containing 24 2.36889
MIR661 microRNA 661 2.36889
ZNF252P zinc finger protein 252, pseudogene 2.36889
PPP1R16A protein phosphatase 1, regulatory subunit 16A 2.36889
RECQL4 RecQ protein-like 4 2.36889
ZNF250 zinc finger protein 250 2.36889
LRRC14 leucine rich repeat containing 14 2.36889
C8ORF82 chromosome 8 open reading frame 82 2.36889
GPT glutamic-pyruvate transaminase (alanine aminotransferase) 2.36889
ZNF251 zinc finger protein 251 2.36889
TMED10P1 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1 2.36889
ZNF517 zinc finger protein 517 2.36889
ADCK5 aarF domain containing kinase 5 2.35236
SLC39A4 solute carrier family 39 (zinc transporter), member 4 2.35236
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa 2.35236
PARP10 poly (ADP-ribose) polymerase family, member 10 2.35236
PLEC plectin 2.35236
SCRT1 scratch family zinc finger 1 2.35236
FBXL6 F-box and leucine-rich repeat protein 6 2.35236
TONSL tonsoku-like, DNA repair protein 2.35236
TMEM249 transmembrane protein 249 2.35236
SLC52A2 solute carrier family 52 (riboflavin transporter), member 2 2.35236
MIR1234 microRNA 1234 2.35236
KIFC2 kinesin family member C2 2.35236
FOXH1 forkhead box H1 2.35236
MIR939 microRNA 939 2.35236
VPS28 vacuolar protein sorting 28 homolog (S. cerevisiae) 2.35236
CYHR1 cysteine/histidine-rich 1 2.35236
SLC45A4 solute carrier family 45, member 4 2.30944
DENND3 DENN/MADD domain containing 3 2.25904
AGO2 argonaute RISC catalytic component 2 2.24845
PTK2 protein tyrosine kinase 2 2.23324
EFR3A EFR3 homolog A (S. cerevisiae) 2.21096
OC90 otoconin 90 2.21096
MIR5194 microRNA 5194 2.20053
ASAP1-IT1 ASAP1 intronic transcript 1 2.20053
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 2.19863
FAM49B family with sequence similarity 49, member B 2.19863
ADCY8 adenylate cyclase 8 (brain) 2.19301
GSDMC gasdermin C 2.18778
CCDC26 CCDC26 long non-coding RNA 2.16091
SNORA25 small nucleolar RNA, H/ACA box 25 2.15953
LOC100130700 uncharacterized LOC100130700 2.08712
LOC146481 2.08712
C8ORF33 chromosome 8 open reading frame 33 2.08021
DGAT1 diacylglycerol O-acyltransferase 1 2.07776
SPATC1 spermatogenesis and centriole associated 1 2.07776
CYC1 cytochrome c-1 2.07776
GPAA1 glycosylphosphatidylinositol anchor attachment 1 2.07776
MAF1 MAF1 homolog (S. cerevisiae) 2.07776
BOP1 block of proliferation 1 2.07776
MROH1 maestro heat-like repeat family member 1 2.07776
EXOSC4 exosome component 4 2.07776
OPLAH 5-oxoprolinase (ATP-hydrolysing) 2.07776
HSF1 heat shock transcription factor 1 2.07776
SHARPIN SHANK-associated RH domain interactor 2.07776
GRINA glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) 2.07776
KIAA1875 KIAA1875 2.07776
MIR1208 microRNA 1208 2.07136
MIR1207 microRNA 1207 2.07136
PVT1 Pvt1 oncogene (non-protein coding) 2.04585

low copy number

Symbol Name Standardized Value
ANXA2P3 annexin A2 pseudogene 3 -3.32901
GRIA3 glutamate receptor, ionotropic, AMPA 3 -3.11641