H3K27me3_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells Gene Set

Dataset Roadmap Epigenomics Histone Modification Site Profiles
Category genomics
Type histone modification site profile
Description histone modification site profile identified as [histone modification]-[cell or tissue sampled] (Roadmap Epigenomics)
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Genes

350 genes with high histone modification abundance in the H3K27me3_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells histone modification site profile from the Roadmap Epigenomics Histone Modification Site Profiles dataset.

Symbol Name
A1BG-AS1 A1BG antisense RNA 1
ABI3 ABI family, member 3
ACOT12 acyl-CoA thioesterase 12
ADAM8 ADAM metallopeptidase domain 8
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional)
ADGRD1 adhesion G protein-coupled receptor D1
AHSP alpha hemoglobin stabilizing protein
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3
AKR1B15 aldo-keto reductase family 1, member B15
ALOX15 arachidonate 15-lipoxygenase
ANO9 anoctamin 9
APLNR apelin receptor
APOE apolipoprotein E
APOO apolipoprotein O
AQP5 aquaporin 5
ARMCX5 armadillo repeat containing, X-linked 5
ARMCX5-GPRASP2 ARMCX5-GPRASP2 readthrough
ART1 ADP-ribosyltransferase 1
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome
ASB11 ankyrin repeat and SOCS box containing 11, E3 ubiquitin protein ligase
ASIC4 acid sensing (proton gated) ion channel family member 4
ASPDH aspartate dehydrogenase domain containing
AVP arginine vasopressin
BCL2L10 BCL2-like 10 (apoptosis facilitator)
BIK BCL2-interacting killer (apoptosis-inducing)
BSND barttin CLCNK-type chloride channel accessory beta subunit
C15ORF27 chromosome 15 open reading frame 27
C16ORF82 chromosome 16 open reading frame 82
C18ORF42 chromosome 18 open reading frame 42
C1ORF194 chromosome 1 open reading frame 194
C1QA complement component 1, q subcomponent, A chain
C2ORF66 chromosome 2 open reading frame 66
C2ORF71 chromosome 2 open reading frame 71
C4ORF19 chromosome 4 open reading frame 19
C5ORF58 chromosome 5 open reading frame 58
C9ORF152 chromosome 9 open reading frame 152
C9ORF66 chromosome 9 open reading frame 66
CACNA1E calcium channel, voltage-dependent, R type, alpha 1E subunit
CADPS Ca++-dependent secretion activator
CBLN1 cerebellin 1 precursor
CBLN4 cerebellin 4 precursor
CCDC178 coiled-coil domain containing 178
CCKAR cholecystokinin A receptor
CCNI2 cyclin I family, member 2
CD3G CD3g molecule, gamma (CD3-TCR complex)
CDCP1 CUB domain containing protein 1
CDH16 cadherin 16, KSP-cadherin
CES5A carboxylesterase 5A
CGN cingulin
CGREF1 cell growth regulator with EF-hand domain 1
CHDH choline dehydrogenase
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CLCA4 chloride channel accessory 4
CLDN18 claudin 18
CLEC1A C-type lectin domain family 1, member A
CLEC4GP1 C-type lectin domain family 4, member G pseudogene 1
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
CNTD2 cyclin N-terminal domain containing 2
CNTN4 contactin 4
CNTNAP4 contactin associated protein-like 4
CNTNAP5 contactin associated protein-like 5
COX6B2 cytochrome c oxidase subunit VIb polypeptide 2 (testis)
CRIP3 cysteine-rich protein 3
CSMD1 CUB and Sushi multiple domains 1
CTNNA3 catenin (cadherin-associated protein), alpha 3
CTNND2 catenin (cadherin-associated protein), delta 2
CXCR4 chemokine (C-X-C motif) receptor 4
CYFIP2 cytoplasmic FMR1 interacting protein 2
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1
DAO D-amino-acid oxidase
DCANP1 dendritic cell-associated nuclear protein
DEFB121 defensin, beta 121
DEFB129 defensin, beta 129
DIO3 deiodinase, iodothyronine, type III
DIRAS2 DIRAS family, GTP-binding RAS-like 2
DLGAP1 discs, large (Drosophila) homolog-associated protein 1
DLX4 distal-less homeobox 4
DNAH11 dynein, axonemal, heavy chain 11
DNAH12 dynein, axonemal, heavy chain 12
DNAH8 dynein, axonemal, heavy chain 8
DNAJB3 DnaJ (Hsp40) homolog, subfamily B, member 3
DOK6 docking protein 6
DPEP1 dipeptidase 1 (renal)
DPF1 D4, zinc and double PHD fingers family 1
DPYSL2 dihydropyrimidinase-like 2
DRD4 dopamine receptor D4
DSC2 desmocollin 2
DSG2 desmoglein 2
EDN3 endothelin 3
ELMO1 engulfment and cell motility 1
EPB41L3 erythrocyte membrane protein band 4.1-like 3
EPHA7 EPH receptor A7
ESYT3 extended synaptotagmin-like protein 3
EVI5 ecotropic viral integration site 5
EXPH5 exophilin 5
F2RL1 coagulation factor II (thrombin) receptor-like 1
FABP1 fatty acid binding protein 1, liver
FABP9 fatty acid binding protein 9, testis
FAM134B family with sequence similarity 134, member B
FAM135B family with sequence similarity 135, member B
FAM160A1 family with sequence similarity 160, member A1
FAM169A family with sequence similarity 169, member A
FAM172BP family with sequence similarity 172, member B pseudogene
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FERD3L Fer3-like bHLH transcription factor
FGF11 fibroblast growth factor 11
FGF12 fibroblast growth factor 12
FGF14-IT1 FGF14 intronic transcript 1
FGFBP1 fibroblast growth factor binding protein 1
FLJ22184
FLT4 fms-related tyrosine kinase 4
FOXR2 forkhead box R2
FRMD4B FERM domain containing 4B
FSTL4 follistatin-like 4
FUT9 fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
FXYD7 FXYD domain containing ion transport regulator 7
GAB3 GRB2-associated binding protein 3
GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2
GAD1 glutamate decarboxylase 1 (brain, 67kDa)
GDPD5 glycerophosphodiester phosphodiesterase domain containing 5
GH2 growth hormone 2
GIPC2 GIPC PDZ domain containing family, member 2
GKAP1 G kinase anchoring protein 1
GLB1L3 galactosidase, beta 1-like 3
GPM6A glycoprotein M6A
GPR139 G protein-coupled receptor 139
GRB7 growth factor receptor-bound protein 7
GRIK1-AS1 GRIK1 antisense RNA 1
GRIN3B glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
GRM3 glutamate receptor, metabotropic 3
GRM6 glutamate receptor, metabotropic 6
GSTM3 glutathione S-transferase mu 3 (brain)
GVINP1 GTPase, very large interferon inducible pseudogene 1
H1FNT H1 histone family, member N, testis-specific
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1
HCRTR1 hypocretin (orexin) receptor 1
HEPHL1 hephaestin-like 1
HES7 hes family bHLH transcription factor 7
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1
HNF4A hepatocyte nuclear factor 4, alpha
HRASLS HRAS-like suppressor
HS3ST4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
ICOSLG inducible T-cell co-stimulator ligand
IFITM5 interferon induced transmembrane protein 5
IFNW1 interferon, omega 1
IL17RB interleukin 17 receptor B
IL1R2 interleukin 1 receptor, type II
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa
ISM2 isthmin 2
IZUMO1R IZUMO1 receptor, JUNO
JAG2 jagged 2
JPH1 junctophilin 1
KANK3 KN motif and ankyrin repeat domains 3
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1
KCNJ3 potassium channel, inwardly rectifying subfamily J, member 3
KCNMB3 potassium channel subfamily M regulatory beta subunit 3
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KIAA1324 KIAA1324
KIAA2022 KIAA2022
KIF17 kinesin family member 17
KIF26A kinesin family member 26A
KIRREL2 kin of IRRE like 2 (Drosophila)
KRT25 keratin 25, type I
KRTAP10-10 keratin associated protein 10-10
KRTAP12-3 keratin associated protein 12-3
LAMA1 laminin, alpha 1
LINC00261 long intergenic non-protein coding RNA 261
LINC00514 long intergenic non-protein coding RNA 514
LINC00851 long intergenic non-protein coding RNA 851
LMOD2 leiomodin 2 (cardiac)
LOC100271832 uncharacterized LOC100271832
LOC100506274 uncharacterized LOC100506274
LOC221122 uncharacterized LOC221122
LOC440896 uncharacterized LOC440896
LOC646268 hCG1654703
LOC653486
LPPR1 lipid phosphate phosphatase-related protein type 1
LRFN5 leucine rich repeat and fibronectin type III domain containing 5
LRP1B low density lipoprotein receptor-related protein 1B
LRRC25 leucine rich repeat containing 25
MC3R melanocortin 3 receptor
MFSD2B major facilitator superfamily domain containing 2B
MGAT4A mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
MIP major intrinsic protein of lens fiber
MIR1264 microRNA 1264
MIR129-2 microRNA 129-2
MIR147B microRNA 147b
MIR190B microRNA 190b
MIR29B2 microRNA 29b-2
MIR29C microRNA 29c
MIR3150A microRNA 3150a
MIR3150B microRNA 3150b
MIR320B1 microRNA 320b-1
MIR34C microRNA 34c
MIR4443 microRNA 4443
MIR4783 microRNA 4783
MIR4798 microRNA 4798
MIR9-1 microRNA 9-1
MIXL1 Mix paired-like homeobox
MMP24 matrix metallopeptidase 24 (membrane-inserted)
MMP28 matrix metallopeptidase 28
MRGPRD MAS-related GPR, member D
MRGPRX1 MAS-related GPR, member X1
MSC musculin
MT3 metallothionein 3
MYO7A myosin VIIA
MYRF myelin regulatory factor
NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2
NANOG Nanog homeobox
NELL1 NEL-like 1 (chicken)
NES nestin
NKAIN1 Na+/K+ transporting ATPase interacting 1
NKAIN4 Na+/K+ transporting ATPase interacting 4
NKAPP1 NFKB activating protein pseudogene 1
NLGN4X neuroligin 4, X-linked
NLRP6 NLR family, pyrin domain containing 6
NMRK2 nicotinamide riboside kinase 2
NODAL nodal growth differentiation factor
NOVA1 neuro-oncological ventral antigen 1
NPFFR1 neuropeptide FF receptor 1
NPW neuropeptide W
NPY2R neuropeptide Y receptor Y2
NR0B1 nuclear receptor subfamily 0, group B, member 1
NRARP NOTCH-regulated ankyrin repeat protein
NRG3 neuregulin 3
NRROS negative regulator of reactive oxygen species
NUP210 nucleoporin 210kDa
NXPE4 neurexophilin and PC-esterase domain family, member 4
OCLN occludin
OGDHL oxoglutarate dehydrogenase-like
OPRK1 opioid receptor, kappa 1
OR2A14 olfactory receptor, family 2, subfamily A, member 14
OR2W5 olfactory receptor, family 2, subfamily W, member 5 (gene/pseudogene)
OR52A1 olfactory receptor, family 52, subfamily A, member 1
OR5E1P olfactory receptor, family 5, subfamily E, member 1 pseudogene
OR7A17 olfactory receptor, family 7, subfamily A, member 17
OXGR1 oxoglutarate (alpha-ketoglutarate) receptor 1
PALM3 paralemmin 3
PARM1 prostate androgen-regulated mucin-like protein 1
PAX6 paired box 6
PCDH17 protocadherin 17
PCDHAC1 protocadherin alpha subfamily C, 1
PCDHAC2 protocadherin alpha subfamily C, 2
PCP4 Purkinje cell protein 4
PCYT1B phosphate cytidylyltransferase 1, choline, beta
PDGFRL platelet-derived growth factor receptor-like
PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein
PKP2 plakophilin 2
PLA2G2F phospholipase A2, group IIF
PLA2G3 phospholipase A2, group III
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific)
PNMA2 paraneoplastic Ma antigen 2
PNMT phenylethanolamine N-methyltransferase
PNOC prepronociceptin
PODN podocan
PODXL podocalyxin-like
PPAP2C phosphatidic acid phosphatase type 2C
PPM1N protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
PPP1R32 protein phosphatase 1, regulatory subunit 32
PROX1 prospero homeobox 1
PRR35 proline rich 35
PRSS3 protease, serine, 3
PRTG protogenin
PRTN3 proteinase 3
PTPRD protein tyrosine phosphatase, receptor type, D
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2
RAB40A RAB40A, member RAS oncogene family
RALYL RALY RNA binding protein-like
RBM11 RNA binding motif protein 11
RBM46 RNA binding motif protein 46
REM1 RAS (RAD and GEM)-like GTP-binding 1
RGMA repulsive guidance molecule family member a
RGS11 regulator of G-protein signaling 11
RHBDL3 rhomboid, veinlet-like 3 (Drosophila)
RNF220 ring finger protein 220
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila)
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila)
RPRM reprimo, TP53 dependent G2 arrest mediator candidate
RYR1 ryanodine receptor 1 (skeletal)
S100A9 S100 calcium binding protein A9
SALL1 spalt-like transcription factor 1
SALL3 spalt-like transcription factor 3
SAMD12 sterile alpha motif domain containing 12
SAMD5 sterile alpha motif domain containing 5
SCGB1C1 secretoglobin, family 1C, member 1
SEPT4 septin 4
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
SFRP5 secreted frizzled-related protein 5
SH3GL3 SH3-domain GRB2-like 3
SHC2 SHC (Src homology 2 domain containing) transforming protein 2
SIGLEC10 sialic acid binding Ig-like lectin 10
SLAIN1 SLAIN motif family, member 1
SLC16A12 solute carrier family 16, member 12
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC23A2 solute carrier family 23 (ascorbic acid transporter), member 2
SLC25A18 solute carrier family 25 (glutamate carrier), member 18
SLC26A9 solute carrier family 26 (anion exchanger), member 9
SLC27A6 solute carrier family 27 (fatty acid transporter), member 6
SLC34A1 solute carrier family 34 (type II sodium/phosphate cotransporter), member 1
SLC38A1 solute carrier family 38, member 1
SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1
SLC52A1 solute carrier family 52 (riboflavin transporter), member 1
SLC9A3 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3
SLCO1C1 solute carrier organic anion transporter family, member 1C1
SLCO2A1 solute carrier organic anion transporter family, member 2A1
SLCO5A1 solute carrier organic anion transporter family, member 5A1
SMPX small muscle protein, X-linked
SORBS2 sorbin and SH3 domain containing 2
SORCS1 sortilin-related VPS10 domain containing receptor 1
SORCS3 sortilin-related VPS10 domain containing receptor 3
SOX3 SRY (sex determining region Y)-box 3
SP8 Sp8 transcription factor
SPOCK3 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
SPTBN4 spectrin, beta, non-erythrocytic 4
SRSF12 serine/arginine-rich splicing factor 12
STAC2 SH3 and cysteine rich domain 2
STK33 serine/threonine kinase 33
STMN3 stathmin-like 3
SV2C synaptic vesicle glycoprotein 2C
SYT10 synaptotagmin X
SYT6 synaptotagmin VI
T T, brachyury homolog (mouse)
TAC3 tachykinin 3
TACR3 tachykinin receptor 3
TAS2R39 taste receptor, type 2, member 39
TAS2R40 taste receptor, type 2, member 40
TAT tyrosine aminotransferase
THSD7B thrombospondin, type I, domain containing 7B
TLL2 tolloid-like 2
TMEM211 transmembrane protein 211
TMEM213 transmembrane protein 213
TMEM235 transmembrane protein 235
TMEM246 transmembrane protein 246
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TNN tenascin N
TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1
TRIM17 tripartite motif containing 17
TRPA1 transient receptor potential cation channel, subfamily A, member 1
TTR transthyretin
UGT1A5 UDP glucuronosyltransferase 1 family, polypeptide A5
USP43 ubiquitin specific peptidase 43
VENTX VENT homeobox
WDR72 WD repeat domain 72
ZFYVE28 zinc finger, FYVE domain containing 28
ZNF215 zinc finger protein 215
ZNF295-AS1 ZNF295 antisense RNA 1
ZNF75D zinc finger protein 75D