Gastritis, Atrophic Gene Set

Dataset HuGE Navigator Gene-Phenotype Associations
Category disease or phenotype associations
Type phenotype
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Genes

86 genes associated with the Gastritis, Atrophic phenotype by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.

Symbol Name
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
ACE angiotensin I converting enzyme
AICDA activation-induced cytidine deaminase
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
CAT catalase
CCL2 chemokine (C-C motif) ligand 2
CD3EAP CD3e molecule, epsilon associated protein
CDX2 caudal type homeobox 2
CMA1 chymase 1, mast cell
CXCL8 chemokine (C-X-C motif) ligand 8
CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1
DNMT1 DNA (cytosine-5-)-methyltransferase 1
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
ERCC1 excision repair cross-complementation group 1
ERCC2 excision repair cross-complementation group 2
ERCC4 excision repair cross-complementation group 4
ERCC6 excision repair cross-complementation group 6
FAS Fas cell surface death receptor
FASLG Fas ligand (TNF superfamily, member 6)
FUT2 fucosyltransferase 2 (secretor status included)
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)
GAB1 GRB2-associated binding protein 1
GSTM1 glutathione S-transferase mu 1
GSTP1 glutathione S-transferase pi 1
GSTT1 glutathione S-transferase theta 1
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HRH2 histamine receptor H2
HSPA1B heat shock 70kDa protein 1B
HSPA1L heat shock 70kDa protein 1-like
HSPA2 heat shock 70kDa protein 2
ICAM1 intercellular adhesion molecule 1
IFNG interferon, gamma
IL10 interleukin 10
IL13 interleukin 13
IL17A interleukin 17A
IL17F interleukin 17F
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL1RN interleukin 1 receptor antagonist
IL2 interleukin 2
IL4 interleukin 4
IL6 interleukin 6
LOC284454 uncharacterized LOC284454
LTA lymphotoxin alpha
MBL2 mannose-binding lectin (protein C) 2, soluble
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR100HG mir-100-let-7a-2 cluster host gene
MIR146A microRNA 146a
MIR196A2 microRNA 196a-2
MIR27A microRNA 27a
MIR492 microRNA 492
MIR608 microRNA 608
MIR98 microRNA 98
MIRLET7A1 microRNA let-7a-1
MIRLET7F1 microRNA let-7f-1
MLH1 mutL homolog 1
MPO myeloperoxidase
MSH2 mutS homolog 2
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MUC1 mucin 1, cell surface associated
MUC2 mucin 2, oligomeric mucus/gel-forming
MUC5B mucin 5B, oligomeric mucus/gel-forming
MUC6 mucin 6, oligomeric mucus/gel-forming
NOD1 nucleotide-binding oligomerization domain containing 1
NOS2 nitric oxide synthase 2, inducible
ODC1 ornithine decarboxylase 1
OGG1 8-oxoguanine DNA glycosylase
PARP1 poly (ADP-ribose) polymerase 1
PGC progastricsin (pepsinogen C)
PLAU plasminogen activator, urokinase
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PRKCH protein kinase C, eta
PSCA prostate stem cell antigen
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTPN11 protein tyrosine phosphatase, non-receptor type 11
RUNX3 runt-related transcription factor 3
TFF2 trefoil factor 2
TFF3 trefoil factor 3 (intestinal)
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TNF tumor necrosis factor
TP53 tumor protein p53
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1