Cerebral nuclei Gene Set

Dataset Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles
Category transcriptomics
Type tissue
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Genes

303 genes with high or low expression in Cerebral nuclei relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 2.02292
GPR155 G protein-coupled receptor 155 1.97178
RASGRP2 RAS guanyl releasing protein 2 (calcium and DAG-regulated) 1.94834
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 1.92884
SYNDIG1L synapse differentiation inducing 1-like 1.89174
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 1.87749
SLC41A1 solute carrier family 41 (magnesium transporter), member 1 1.8115
ACVRL1 activin A receptor type II-like 1 1.79263
ZSWIM6 zinc finger, SWIM-type containing 6 1.7803
ACVR1C activin A receptor, type IC 1.77658
STK26 serine/threonine protein kinase 26 1.76934
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 1.76727
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 1.75739
SMAD4 SMAD family member 4 1.737
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 1.7274
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 1.7258
RARB retinoic acid receptor, beta 1.71822
KCNK2 potassium channel, two pore domain subfamily K, member 2 1.70822
RASD2 RASD family, member 2 1.70527
PARD3 par-3 family cell polarity regulator 1.6895
KCNA4 potassium channel, voltage gated shaker related subfamily A, member 4 1.67236
ARG2 arginase 2 1.66366
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) 1.63287
RXRG retinoid X receptor, gamma 1.61862
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 1.616
BCR breakpoint cluster region 1.60468
GNB5 guanine nucleotide binding protein (G protein), beta 5 1.58936
GPRIN3 GPRIN family member 3 1.58779
KAZN kazrin, periplakin interacting protein 1.58584
CHMP1B charged multivesicular body protein 1B 1.58287
STRN striatin, calmodulin binding protein 1.5796
ADORA2A adenosine A2a receptor 1.57652
SERPINA9 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9 1.57571
TACR1 tachykinin receptor 1 1.56549
SH3RF2 SH3 domain containing ring finger 2 1.55836
RIC8B RIC8 guanine nucleotide exchange factor B 1.55497
GPR6 G protein-coupled receptor 6 1.5498
PRKAR2B protein kinase, cAMP-dependent, regulatory, type II, beta 1.54268
IVNS1ABP influenza virus NS1A binding protein 1.53979
SUN2 Sad1 and UNC84 domain containing 2 1.53431
RGS20 regulator of G-protein signaling 20 1.53206
KIAA1462 KIAA1462 1.52391
PDE10A phosphodiesterase 10A 1.52357
ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 1.52314
SH2D5 SH2 domain containing 5 1.52231
GNAL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type 1.52221
DRD2 dopamine receptor D2 1.52145
BCL11B B-cell CLL/lymphoma 11B (zinc finger protein) 1.51815
SRM spermidine synthase 1.51476
CD4 CD4 molecule 1.51075
PDE7B phosphodiesterase 7B 1.5093
CYLD cylindromatosis (turban tumor syndrome) 1.48643
DRD1 dopamine receptor D1 1.48577
INF2 inverted formin, FH2 and WH2 domain containing 1.48389
KCNJ2 potassium channel, inwardly rectifying subfamily J, member 2 1.47633
SOX8 SRY (sex determining region Y)-box 8 1.47437
CBR3 carbonyl reductase 3 1.45921
GPR88 G protein-coupled receptor 88 1.45454
LRRK2 leucine-rich repeat kinase 2 1.45103
RGS9 regulator of G-protein signaling 9 1.43276
ACY1 aminoacylase 1 1.42662
CHRM4 cholinergic receptor, muscarinic 4 1.42098
GSG1L GSG1-like 1.42036
TPST1 tyrosylprotein sulfotransferase 1 1.418
ELMOD1 ELMO/CED-12 domain containing 1 1.41436
SPEG SPEG complex locus 1.40843
SHB Src homology 2 domain containing adaptor protein B 1.40753
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 1.39734
TOMM70A translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) 1.39483
PTPN5 protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) 1.39105
OSBPL8 oxysterol binding protein-like 8 1.38739
RGS2 regulator of G-protein signaling 2 1.38484
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 1.38479
CPNE5 copine V 1.38389
GNG7 guanine nucleotide binding protein (G protein), gamma 7 1.38063
SPOCK3 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 1.37944
DLX6 distal-less homeobox 6 1.37857
DGKB diacylglycerol kinase, beta 90kDa 1.37544
VRK1 vaccinia related kinase 1 1.37535
ADCY5 adenylate cyclase 5 1.37318
MME membrane metallo-endopeptidase 1.36957
CDHR3 cadherin-related family member 3 1.36503
KDM3A lysine (K)-specific demethylase 3A 1.36406
AKAP1 A kinase (PRKA) anchor protein 1 1.36321
DACH1 dachshund family transcription factor 1 1.35564
TMEM88 transmembrane protein 88 1.35511
TESC tescalcin 1.35404
MCHR1 melanin-concentrating hormone receptor 1 1.35334
COCH cochlin 1.34858
CLIP4 CAP-GLY domain containing linker protein family, member 4 1.33975
ACTN1 actinin, alpha 1 1.33915
GRIPAP1 GRIP1 associated protein 1 1.33305
MYT1L myelin transcription factor 1-like 1.32674
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 1.32453
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 1.31133
LZTS3 leucine zipper, putative tumor suppressor family member 3 1.30222
ATP5J2-PTCD1 ATP5J2-PTCD1 readthrough 1.29721
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 1.29652
PPP1R9A protein phosphatase 1, regulatory subunit 9A 1.28282
KIAA1324 KIAA1324 1.27848
LPL lipoprotein lipase 1.27531
KIAA0232 KIAA0232 1.27529
CIPC CLOCK-interacting pacemaker 1.26922
GPR83 G protein-coupled receptor 83 1.26177
POU3F4 POU class 3 homeobox 4 1.25952
PDPK1 3-phosphoinositide dependent protein kinase 1 1.25412
C3ORF70 chromosome 3 open reading frame 70 1.25295
DGKI diacylglycerol kinase, iota 1.25142
REM2 RAS (RAD and GEM)-like GTP binding 2 1.24643
RPS6KA4 ribosomal protein S6 kinase, 90kDa, polypeptide 4 1.24079
NETO1 neuropilin (NRP) and tolloid (TLL)-like 1 1.239
FAM171A1 family with sequence similarity 171, member A1 1.23856
CDK19 cyclin-dependent kinase 19 1.23312
PENK proenkephalin 1.22576
KCNIP2 Kv channel interacting protein 2 1.22449
ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 1.22405
OTOF otoferlin 1.22149
AP1S1 adaptor-related protein complex 1, sigma 1 subunit 1.22025
CA11 carbonic anhydrase XI 1.2169
CRYBG3 beta-gamma crystallin domain containing 3 1.21279
SYTL5 synaptotagmin-like 5 1.21144
MN1 meningioma (disrupted in balanced translocation) 1 1.2076
PHACTR1 phosphatase and actin regulator 1 1.19995
HTR1B 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled 1.18763
IPPK inositol 1,3,4,5,6-pentakisphosphate 2-kinase 1.18708
FRMD8 FERM domain containing 8 1.18458
GUCY1A3 guanylate cyclase 1, soluble, alpha 3 1.18117
MBNL2 muscleblind-like splicing regulator 2 1.17911
PMEPA1 prostate transmembrane protein, androgen induced 1 1.17064
ABLIM2 actin binding LIM protein family, member 2 1.16901
NUP93 nucleoporin 93kDa 1.16768
MEIS2 Meis homeobox 2 1.16677
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 1.15715
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 1.15644
MAN1A1 mannosidase, alpha, class 1A, member 1 1.15497
PDYN prodynorphin 1.15395
LINGO3 leucine rich repeat and Ig domain containing 3 1.15189
TRAIP TRAF interacting protein 1.15082
ASIC4 acid sensing (proton gated) ion channel family member 4 1.14849
PPP1R16B protein phosphatase 1, regulatory subunit 16B 1.14717
TRERF1 transcriptional regulating factor 1 1.14393
PLCL2 phospholipase C-like 2 1.14026
WNT2 wingless-type MMTV integration site family member 2 1.13825
MGC50722 uncharacterized MGC50722 1.12541
FOXO1 forkhead box O1 1.11783
SERTAD4 SERTA domain containing 4 1.11392
HPCA hippocalcin 1.11023
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 1.10958
FLRT3 fibronectin leucine rich transmembrane protein 3 1.10913
PPP1R7 protein phosphatase 1, regulatory subunit 7 1.10666
SPATA2L spermatogenesis associated 2-like 1.1035
OR11L1 olfactory receptor, family 11, subfamily L, member 1 1.10288
ARL4D ADP-ribosylation factor-like 4D 1.1001
MARK2 MAP/microtubule affinity-regulating kinase 2 1.09283
PCP4 Purkinje cell protein 4 1.08312
DGAT2 diacylglycerol O-acyltransferase 2 1.08096
RASGEF1A RasGEF domain family, member 1A 1.07599
BAG5 BCL2-associated athanogene 5 1.07152
FCHO1 FCH domain only 1 1.07001
CNST consortin, connexin sorting protein 1.0688
PAPD4 PAP associated domain containing 4 1.06772
CHTF8 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) 1.06563
SLK STE20-like kinase 1.06316
DZIP1L DAZ interacting zinc finger protein 1-like 1.05984
SCMH1 sex comb on midleg homolog 1 (Drosophila) 1.05898
TNFAIP6 tumor necrosis factor, alpha-induced protein 6 1.05871
ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 1.05655
FAM110B family with sequence similarity 110, member B 1.05413
SOWAHA sosondowah ankyrin repeat domain family member A 1.05362
CA12 carbonic anhydrase XII 1.05333
SLC35D3 solute carrier family 35, member D3 1.05184
TMOD1 tropomodulin 1 1.05078
TAC1 tachykinin, precursor 1 1.05055
TNFRSF8 tumor necrosis factor receptor superfamily, member 8 1.04825
CUZD1 CUB and zona pellucida-like domains 1 1.0481
PTTG1IP pituitary tumor-transforming 1 interacting protein 1.04664
SORBS1 sorbin and SH3 domain containing 1 1.04662
NECAB2 N-terminal EF-hand calcium binding protein 2 1.04538
SLC35E1 solute carrier family 35, member E1 1.04205
NDRG4 NDRG family member 4 1.03989
CACNG4 calcium channel, voltage-dependent, gamma subunit 4 1.03744
RASGEF1B RasGEF domain family, member 1B 1.0362
LDLRAD4 low density lipoprotein receptor class A domain containing 4 1.03439
ALCAM activated leukocyte cell adhesion molecule 1.03181
DOCK4 dedicator of cytokinesis 4 1.02527
USP28 ubiquitin specific peptidase 28 1.02478
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 1.02306
AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 1.02097
TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 1.02034
CCND2 cyclin D2 1.01971
MYO1B myosin IB 1.01864
PLEKHA5 pleckstrin homology domain containing, family A member 5 1.018
TIAM2 T-cell lymphoma invasion and metastasis 2 1.01683
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 1.01473
CACNA1H calcium channel, voltage-dependent, T type, alpha 1H subunit 1.01222
SCUBE3 signal peptide, CUB domain, EGF-like 3 1.0122
RYR1 ryanodine receptor 1 (skeletal) 1.0121
SLC25A27 solute carrier family 25, member 27 1.01017
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase 1.00915
DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) 1.00842
ACTL6B actin-like 6B 1.00724
CSNK1G1 casein kinase 1, gamma 1 1.00636
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 1.00564
HEXB hexosaminidase B (beta polypeptide) 1.00502
UNC79 unc-79 homolog (C. elegans) 1.00489

low expression

Symbol Name Standardized Value
MARCH1 membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase -2.54861
TBC1D25 TBC1 domain family, member 25 -2.37249
ATM ATM serine/threonine kinase -2.13984
IFT122 intraflagellar transport 122 -1.97683
BCL2A1 BCL2-related protein A1 -1.87259
PLA2G12A phospholipase A2, group XIIA -1.85279
NSUN4 NOP2/Sun domain family, member 4 -1.79821
SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8 -1.7915
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -1.72969
HEATR5A HEAT repeat containing 5A -1.68977
SLC9B2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 -1.62028
NXT2 nuclear transport factor 2-like export factor 2 -1.58389
KDM4C lysine (K)-specific demethylase 4C -1.53082
MARVELD3 MARVEL domain containing 3 -1.52665
TSHB thyroid stimulating hormone, beta -1.49697
PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 -1.47377
ACRV1 acrosomal vesicle protein 1 -1.47018
TUBD1 tubulin, delta 1 -1.43492
OR6K2 olfactory receptor, family 6, subfamily K, member 2 -1.40095
BATF3 basic leucine zipper transcription factor, ATF-like 3 -1.38436
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) -1.37717
CAMP cathelicidin antimicrobial peptide -1.34886
MMP20 matrix metallopeptidase 20 -1.34635
RELB v-rel avian reticuloendotheliosis viral oncogene homolog B -1.3138
NEK8 NIMA-related kinase 8 -1.31051
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -1.30962
SLC24A1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 -1.30231
LYPLAL1 lysophospholipase-like 1 -1.30195
HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 -1.28479
FAM98B family with sequence similarity 98, member B -1.28121
GK5 glycerol kinase 5 (putative) -1.27839
EPHB3 EPH receptor B3 -1.26339
ALOX12B arachidonate 12-lipoxygenase, 12R type -1.25347
CASP8AP2 caspase 8 associated protein 2 -1.24689
KRT36 keratin 36, type I -1.2438
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -1.23075
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 -1.23005
LY75 lymphocyte antigen 75 -1.22703
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -1.22672
ACTN2 actinin, alpha 2 -1.21498
USP53 ubiquitin specific peptidase 53 -1.20781
ADAM21 ADAM metallopeptidase domain 21 -1.20566
C5ORF63 chromosome 5 open reading frame 63 -1.18787
MYB v-myb avian myeloblastosis viral oncogene homolog -1.18739
PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like -1.18429
C15ORF43 chromosome 15 open reading frame 43 -1.18104
TCAF2 TRPM8 channel-associated factor 2 -1.16779
MCM9 minichromosome maintenance complex component 9 -1.16695
IGSF23 immunoglobulin superfamily, member 23 -1.15642
ARID5B AT rich interactive domain 5B (MRF1-like) -1.14609
CRBN cereblon -1.14504
TRMT10A tRNA methyltransferase 10 homolog A (S. cerevisiae) -1.13875
CSRP3 cysteine and glycine-rich protein 3 (cardiac LIM protein) -1.1381
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -1.12655
FNDC8 fibronectin type III domain containing 8 -1.12408
SYT13 synaptotagmin XIII -1.12261
AQP9 aquaporin 9 -1.10595
GPR180 G protein-coupled receptor 180 -1.10432
FAIM2 Fas apoptotic inhibitory molecule 2 -1.1033
LYZL4 lysozyme-like 4 -1.10328
GLDN gliomedin -1.1008
NUP133 nucleoporin 133kDa -1.09966
GLUD1 glutamate dehydrogenase 1 -1.09063
CD207 CD207 molecule, langerin -1.08666
COL4A6 collagen, type IV, alpha 6 -1.08646
GBP6 guanylate binding protein family, member 6 -1.07883
HCRTR2 hypocretin (orexin) receptor 2 -1.0671
GPATCH2 G patch domain containing 2 -1.06708
GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 -1.06266
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 -1.06121
OVCH2 ovochymase 2 (gene/pseudogene) -1.05959
TAS2R42 taste receptor, type 2, member 42 -1.05845
SLC17A4 solute carrier family 17, member 4 -1.05631
SMC1B structural maintenance of chromosomes 1B -1.05271
KREMEN2 kringle containing transmembrane protein 2 -1.04976
ICMT isoprenylcysteine carboxyl methyltransferase -1.04869
SARM1 sterile alpha and TIR motif containing 1 -1.04729
LY6G5C lymphocyte antigen 6 complex, locus G5C -1.04624
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 -1.04355
NRF1 nuclear respiratory factor 1 -1.04034
E4F1 E4F transcription factor 1 -1.04016
ATP13A2 ATPase type 13A2 -1.03955
PILRB paired immunoglobin-like type 2 receptor beta -1.03713
OLFM1 olfactomedin 1 -1.03431
CUBN cubilin (intrinsic factor-cobalamin receptor) -1.03283
ZNF175 zinc finger protein 175 -1.02586
TAS2R16 taste receptor, type 2, member 16 -1.02292
EXOSC1 exosome component 1 -1.02262
GNAT1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 -1.02081
PLG plasminogen -1.01873
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 -1.01448
NR2E3 nuclear receptor subfamily 2, group E, member 3 -1.01016
LIG4 ligase IV, DNA, ATP-dependent -1.00848
FAM185A family with sequence similarity 185, member A -1.00694
LMX1A LIM homeobox transcription factor 1, alpha -1.00677
PKP3 plakophilin 3 -1.00537
TRPV1 transient receptor potential cation channel, subfamily V, member 1 -1.00391
DNAJC5G DnaJ (Hsp40) homolog, subfamily C, member 5 gamma -1.0033