COLO-783 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

270 genes with high or low copy number in COLO-783 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value

low copy number

Symbol Name Standardized Value
SNAI3-AS1 SNAI3 antisense RNA 1 -5.12655
RNF166 ring finger protein 166 -5.12655
ZNF276 zinc finger protein 276 -5.12655
LINC00304 long intergenic non-protein coding RNA 304 -5.12655
CDT1 chromatin licensing and DNA replication factor 1 -5.12655
TUBB3 tubulin, beta 3 class III -5.12655
ACSF3 acyl-CoA synthetase family member 3 -5.12655
ZC3H18 zinc finger CCCH-type containing 18 -5.12655
CPNE7 copine VII -5.12655
SPG7 spastic paraplegia 7 (pure and complicated autosomal recessive) -5.12655
MIR4722 microRNA 4722 -5.12655
PABPN1L poly(A) binding protein, nuclear 1-like (cytoplasmic) -5.12655
GALNS galactosamine (N-acetyl)-6-sulfatase -5.12655
SPIRE2 spire-type actin nucleation factor 2 -5.12655
LOC100287036 uncharacterized LOC100287036 -5.12655
ZNF469 zinc finger protein 469 -5.12655
HEATR3 HEAT repeat containing 3 -5.12655
MIR5189 microRNA 5189 -5.12655
CHMP1A charged multivesicular body protein 1A -5.12655
CDH15 cadherin 15, type 1, M-cadherin (myotubule) -5.12655
DPEP1 dipeptidase 1 (renal) -5.12655
ZFPM1 zinc finger protein, FOG family member 1 -5.12655
MVD mevalonate (diphospho) decarboxylase -5.12655
CENPBD1 CENPB DNA-binding domains containing 1 -5.12655
SNAI3 snail family zinc finger 3 -5.12655
FANCA Fanconi anemia, complementation group A -5.12655
SLC22A31 solute carrier family 22, member 31 -5.12655
PIEZO1 piezo-type mechanosensitive ion channel component 1 -5.12655
DEF8 differentially expressed in FDCP 8 homolog (mouse) -5.12655
VPS9D1 VPS9 domain containing 1 -5.12655
TRAPPC2L trafficking protein particle complex 2-like -5.12655
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 -5.12655
SPATA2L spermatogenesis associated 2-like -5.12655
IL17C interleukin 17C -5.12655
APRT adenine phosphoribosyltransferase -5.12655
CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 -5.12655
LOC400558 uncharacterized LOC400558 -5.12655
CYBA cytochrome b-245, alpha polypeptide -5.12655
TCF25 transcription factor 25 (basic helix-loop-helix) -5.12655
SNORD68 small nucleolar RNA, C/D box 68 -5.12655
CDK10 cyclin-dependent kinase 10 -5.12655
CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe) -5.12655
RPL13 ribosomal protein L13 -5.12655
ZNF778 zinc finger protein 778 -5.12655
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) -5.12655
WTAP Wilms tumor 1 associated protein -3.83684
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1 -3.83684
ACAT2 acetyl-CoA acetyltransferase 2 -3.83684
PNLDC1 poly(A)-specific ribonuclease (PARN)-like domain containing 1 -3.83684
GAS8-AS1 GAS8 antisense RNA 1 -3.83684
EZR-AS1 EZR antisense RNA 1 -3.83684
ADCY7 adenylate cyclase 7 -3.83684
AFG3L1P AFG3-like AAA ATPase 1, pseudogene -3.83684
TULP4 tubby like protein 4 -3.83684
TCP1 t-complex 1 -3.83684
TMEM181 transmembrane protein 181 -3.83684
OSTCP1 oligosaccharyltransferase complex subunit pseudogene 1 -3.83684
CDH13 cadherin 13 -3.83684
PAPD5 PAP associated domain containing 5 -3.83684
DYNLT1 dynein, light chain, Tctex-type 1 -3.83684
GAS8 growth arrest-specific 8 -3.83684
SYTL3 synaptotagmin-like 3 -3.83684
SNORA20 small nucleolar RNA, H/ACA box 20 -3.83684
LOC100129518 uncharacterized LOC100129518 -3.83684
PRDM7 PR domain containing 7 -3.83684
MRPL18 mitochondrial ribosomal protein L18 -3.83684
SNORA29 small nucleolar RNA, H/ACA box 29 -3.83684
SOD2 superoxide dismutase 2, mitochondrial -3.83684
C6ORF99 chromosome 6 open reading frame 99 -3.83684
ZNF423 zinc finger protein 423 -3.83684
MIR3918 microRNA 3918 -3.83684
EZR ezrin -3.83684
FNDC1 fibronectin type III domain containing 1 -3.7119
TAGAP T-cell activation RhoGTPase activating protein -3.7119
RSPH3 radial spoke 3 homolog (Chlamydomonas) -3.7119
ANKRD11 ankyrin repeat domain 11 -3.56449
TG thyroglobulin -3.4536
KCNQ3 potassium channel, voltage gated KQT-like subfamily Q, member 3 -3.4536
TMEM71 transmembrane protein 71 -3.45316
HPYR1 Helicobacter pylori responsive 1 (non-protein coding) -3.45204
SLA Src-like-adaptor -3.45069
WISP1 WNT1 inducible signaling pathway protein 1 -3.45069
NDRG1 N-myc downstream regulated 1 -3.45001
PHF20L1 PHD finger protein 20-like 1 -3.44301
LRRC6 leucine rich repeat containing 6 -3.4404
LCE1D late cornified envelope 1D -3.43145
CNTNAP4 contactin associated protein-like 4 -3.38669
HYDIN HYDIN, axonemal central pair apparatus protein -3.38669
HCCAT5 hepatocellular carcinoma associated transcript 5 (non-protein coding) -3.32901
FA2H fatty acid 2-hydroxylase -3.32901
KARS lysyl-tRNA synthetase -3.32901
CHST5 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 -3.32901
TERF2IP telomeric repeat binding factor 2, interacting protein -3.32901
LOC100506172 -3.32901
MIR4719 microRNA 4719 -3.32901
TMEM231 transmembrane protein 231 -3.32901
WDR59 WD repeat domain 59 -3.32901
MLKL mixed lineage kinase domain-like -3.29865
TMEM170A transmembrane protein 170A -3.29865
MON1B MON1 secretory trafficking family member B -3.29865
ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 -3.29865
SYCE1L synaptonemal complex central element protein 1-like -3.29865
LOC283922 pyruvate dehydrogenase phosphatase regulatory subunit pseudogene -3.29865
RFWD3 ring finger and WD repeat domain 3 -3.29865
BCAR1 breast cancer anti-estrogen resistance 1 -3.29865
CFDP1 craniofacial development protein 1 -3.29865
GABARAPL2 GABA(A) receptor-associated protein-like 2 -3.29865
CENPN centromere protein N -3.29865
CTRB2 chymotrypsinogen B2 -3.29865
ZFP1 ZFP1 zinc finger protein -3.29865
LDHD lactate dehydrogenase D -3.29865
ADAT1 adenosine deaminase, tRNA-specific 1 -3.29865
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase -3.29865
GLG1 golgi glycoprotein 1 -3.29865
CHST6 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 -3.29865
CTRB1 chymotrypsinogen B1 -3.29865
CLEC18B C-type lectin domain family 18, member B -3.29865
CMC2 C-x(9)-C motif containing 2 -3.29865
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 -3.29865
MIR1538 microRNA 1538 -3.2703
C16ORF46 chromosome 16 open reading frame 46 -3.2703
NQO1 NAD(P)H dehydrogenase, quinone 1 -3.2703
VAC14-AS1 VAC14 antisense RNA 1 -3.2703
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) -3.2703
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -3.2703
WWP2 WW domain containing E3 ubiquitin protein ligase 2 -3.2703
DYNLRB2 dynein, light chain, roadblock-type 2 -3.2703
GCSH glycine cleavage system protein H (aminomethyl carrier) -3.2703
CLEC3A C-type lectin domain family 3, member A -3.2703
PMFBP1 polyamine modulated factor 1 binding protein 1 -3.2703
VAT1L vesicle amine transport 1-like -3.2703
ATMIN ATM interactor -3.2703
CDYL2 chromodomain protein, Y-like 2 -3.2703
VAC14 Vac14 homolog (S. cerevisiae) -3.2703
FTO fat mass and obesity associated -3.2703
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -3.2703
CDH8 cadherin 8, type 2 -3.2703
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog -3.2703
RPGRIP1L RPGRIP1-like -3.2703
E2F4 E2F transcription factor 4, p107/p130-binding -3.24687
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A -3.24687
FBXL8 F-box and leucine-rich repeat protein 8 -3.24687
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B -3.24687
RLTPR RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing -3.24687
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae) -3.24687
MIR140 microRNA 140 -3.24687
SNORD111 small nucleolar RNA, C/D box 111 -3.24687
CTRL chymotrypsin-like -3.24687
CTCF CCCTC-binding factor (zinc finger protein) -3.24687
TAT tyrosine aminotransferase -3.24687
CLEC18C C-type lectin domain family 18, member C -3.24687
ZNF19 zinc finger protein 19 -3.24687
ZFP90 ZFP90 zinc finger protein -3.24687
AARS alanyl-tRNA synthetase -3.24687
IST1 increased sodium tolerance 1 homolog (yeast) -3.24687
PLEKHG4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 -3.24687
TPPP3 tubulin polymerization-promoting protein family member 3 -3.24687
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) -3.24687
SF3B3 splicing factor 3b, subunit 3, 130kDa -3.24687
SNORD71 small nucleolar RNA, C/D box 71 -3.24687
HSD17B2 hydroxysteroid (17-beta) dehydrogenase 2 -3.24687
LCAT lecithin-cholesterol acyltransferase -3.24687
ESRP2 epithelial splicing regulatory protein 2 -3.24687
ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 -3.24687
SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 -3.24687
COG4 component of oligomeric golgi complex 4 -3.24687
CLEC18A C-type lectin domain family 18, member A -3.24687
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) -3.24687
FHOD1 formin homology 2 domain containing 1 -3.24687
AP1G1 adaptor-related protein complex 1, gamma 1 subunit -3.24687
NUTF2 nuclear transport factor 2 -3.24687
CMIP c-Maf inducing protein -3.24687
PDF peptide deformylase (mitochondrial) -3.24687
LRRC29 leucine rich repeat containing 29 -3.24687
MIR328 microRNA 328 -3.24687
MPHOSPH6 M-phase phosphoprotein 6 -3.24687
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 -3.24687
HPR haptoglobin-related protein -3.24687
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2 -3.24687
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 -3.24687
EDC4 enhancer of mRNA decapping 4 -3.24687
ZNF23 zinc finger protein 23 -3.24687
LOC100506083 uncharacterized LOC100506083 -3.24687
SLC9A5 solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 -3.24687
COG8 component of oligomeric golgi complex 8 -3.24687
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 -3.24687
KCTD19 potassium channel tetramerization domain containing 19 -3.24687
SNORD111B small nucleolar RNA, C/D box 111B -3.24687
EXOC3L1 exocyst complex component 3-like 1 -3.24687
SLC7A6 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 -3.24687
CHST4 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 -3.24687
PSKH1 protein serine kinase H1 -3.24687
ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 -3.24687
CENPT centromere protein T -3.24687
HSF4 heat shock transcription factor 4 -3.24687
FUK fucokinase -3.24687
CIRH1A cirrhosis, autosomal recessive 1A (cirhin) -3.24687
ACD adrenocortical dysplasia homolog (mouse) -3.24687
TERF2 telomeric repeat binding factor 2 -3.24687
LRRC36 leucine rich repeat containing 36 -3.24687
B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 -3.24687
DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 -3.24687
PARD6A par-6 family cell polarity regulator alpha -3.24687
HP haptoglobin -3.24687
DPEP3 dipeptidase 3 -3.24687
C16ORF86 chromosome 16 open reading frame 86 -3.24687
TSNAXIP1 translin-associated factor X interacting protein 1 -3.24687
NRN1L neuritin 1-like -3.24687
PLA2G15 phospholipase A2, group XV -3.24687
SLC7A6OS solute carrier family 7, member 6 opposite strand -3.24687
ENKD1 enkurin domain containing 1 -3.24687
ZNF821 zinc finger protein 821 -3.24687
DHODH dihydroorotate dehydrogenase (quinone) -3.24687
IL34 interleukin 34 -3.24687
RANBP10 RAN binding protein 10 -3.24687
PSMB10 proteasome (prosome, macropain) subunit, beta type, 10 -3.24687
EXOSC6 exosome component 6 -3.24687
CHTF8 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) -3.24687
LOC100129617 uncharacterized LOC100129617 -3.24687
ATXN1L ataxin 1-like -3.24687
AGRP agouti related neuropeptide -3.24687
MARVELD3 MARVEL domain containing 3 -3.24687
MIR4720 microRNA 4720 -3.24687
KIAA0895L KIAA0895-like -3.24687
HAS3 hyaluronan synthase 3 -3.24687
MTSS1L metastasis suppressor 1-like -3.24687
FAM65A family with sequence similarity 65, member A -3.24687
GFOD2 glucose-fructose oxidoreductase domain containing 2 -3.24687
ZDHHC1 zinc finger, DHHC-type containing 1 -3.24687
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4 -3.24687
TMEM208 transmembrane protein 208 -3.24687
GAN gigaxonin -3.24687
DPEP2 dipeptidase 2 -3.24687
TRADD TNFRSF1A-associated via death domain -3.24687
CALB2 calbindin 2 -3.24687
TMED6 transmembrane emp24 protein transport domain containing 6 -3.24687
TXNL4B thioredoxin-like 4B -3.24687
ELMO3 engulfment and cell motility 3 -3.24687
PKD1L3 polycystic kidney disease 1-like 3 -3.24687
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) -3.24687
SNORA70D small nucleolar RNA, H/ACA box 70D -3.24687
THAP11 THAP domain containing 11 -3.24687
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 -3.24687
PRMT7 protein arginine methyltransferase 7 -3.24687
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) -3.24687
NIP7 NIP7, nucleolar pre-rRNA processing protein -3.24687
ZFHX3 zinc finger homeobox 3 -3.15179
LOC643802 u3 small nucleolar ribonucleoprotein protein MPP10-like -3.14331
AKTIP AKT interacting protein -3.14331
CHD9 chromodomain helicase DNA binding protein 9 -3.14331
RBL2 retinoblastoma-like 2 -3.14331
PKD1L2 polycystic kidney disease 1-like 2 (gene/pseudogene) -3.12964
C16ORF97 chromosome 16 open reading frame 97 -3.11641
C16ORF70 chromosome 16 open reading frame 70 -3.11641
CBFB core-binding factor, beta subunit -3.11641
LINC00919 long intergenic non-protein coding RNA 919 -3.11641
PDXDC2P pyridoxal-dependent decarboxylase domain containing 2, pseudogene -3.11641
SNX20 sorting nexin 20 -3.11641
BRD7 bromodomain containing 7 -3.11641
MIR1972-1 microRNA 1972-1 -3.11641
TANGO6 transport and golgi organization 6 homolog (Drosophila) -3.11641
NKD1 naked cuticle homolog 1 (Drosophila) -3.11641
TOX3 TOX high mobility group box family member 3 -3.11641
NOD2 nucleotide-binding oligomerization domain containing 2 -3.11641
CYLD cylindromatosis (turban tumor syndrome) -3.11641
PDPR pyruvate dehydrogenase phosphatase regulatory subunit -3.11641
CDH3 cadherin 3, type 1, P-cadherin (placental) -3.03082
SNORD112 small nucleolar RNA, C/D box 112 -3.0138
CDH1 cadherin 1, type 1, E-cadherin (epithelial) -2.99615
WWOX WW domain containing oxidoreductase -2.94448