Brain Lower Grade Glioma_LGG_TCGA-WY-A85B-01A-11R-A36H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

188 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-WY-A85B-01A-11R-A36H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADAT aminoadipate aminotransferase
ACO1 aconitase 1, soluble
ADCY7 adenylate cyclase 7
ADK adenosine kinase
APOC4 apolipoprotein C-IV
ARMCX3 armadillo repeat containing, X-linked 3
ARMCX6 armadillo repeat containing, X-linked 6
BLID BH3-like motif containing, cell death inducer
BOLL boule-like RNA-binding protein
BPESC1 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
BRD7 bromodomain containing 7
BRD7P3 bromodomain containing 7 pseudogene 3
BTF3L4 basic transcription factor 3-like 4
C16ORF87 chromosome 16 open reading frame 87
C17ORF98 chromosome 17 open reading frame 98
C20ORF203 chromosome 20 open reading frame 203
C22ORF23 chromosome 22 open reading frame 23
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CBWD1 COBW domain containing 1
CD163L1 CD163 molecule-like 1
CD36 CD36 molecule (thrombospondin receptor)
CD3EAP CD3e molecule, epsilon associated protein
CDK8 cyclin-dependent kinase 8
CDRT15P1 CMT1A duplicated region transcript 15 pseudogene 1
CENPBD1 CENPB DNA-binding domains containing 1
CEP170P1 centrosomal protein 170kDa pseudogene 1
CEP83 centrosomal protein 83kDa
CRLF2 cytokine receptor-like factor 2
CRLS1 cardiolipin synthase 1
CSH1 chorionic somatomammotropin hormone 1 (placental lactogen)
CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2
DEFB132 defensin, beta 132
DGCR8 DGCR8 microprocessor complex subunit
DKFZP434J0226 uncharacterized LOC93429
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9
DPPA3 developmental pluripotency associated 3
DPPA5 developmental pluripotency associated 5
DSCAM Down syndrome cell adhesion molecule
EED embryonic ectoderm development
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3
ESRG embryonic stem cell related (non-protein coding)
FAM90A1 family with sequence similarity 90, member A1
FAM95B1 family with sequence similarity 95, member B1
FASTKD1 FAST kinase domains 1
FLJ13224 uncharacterized LOC79857
FOLR2 folate receptor 2 (fetal)
FOXI3 forkhead box I3
FRAT1 frequently rearranged in advanced T-cell lymphomas 1
FRAT2 frequently rearranged in advanced T-cell lymphomas 2
GPR32 G protein-coupled receptor 32
GUSBP4 glucuronidase, beta pseudogene 4
HERC2P4 hect domain and RLD 2 pseudogene 4
HHLA1 HERV-H LTR-associating 1
HIST3H3 histone cluster 3, H3
HMGN1 high mobility group nucleosome binding domain 1
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
HPGDS hematopoietic prostaglandin D synthase
HPSE heparanase
HUS1B HUS1 checkpoint homolog b (S. pombe)
INPP5B inositol polyphosphate-5-phosphatase, 75kDa
IVNS1ABP influenza virus NS1A binding protein
JRKL JRK-like
KCNJ5 potassium channel, inwardly rectifying subfamily J, member 5
KDM4A lysine (K)-specific demethylase 4A
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KIAA0020 KIAA0020
KRT12 keratin 12, type I
KRT39 keratin 39, type I
KRTAP4-4 keratin associated protein 4-4
LCE1A late cornified envelope 1A
LDHB lactate dehydrogenase B
LINC00161 long intergenic non-protein coding RNA 161
LINC00301 long intergenic non-protein coding RNA 301
LINC01555 long intergenic non-protein coding RNA 1555
LOC100128288 uncharacterized LOC100128288
LOC100134868 uncharacterized LOC100134868
LOC100240734 uncharacterized LOC100240734
LOC388692 uncharacterized LOC388692
LOC440040 glutamate receptor, metabotropic 5 pseudogene
LOC90784 uncharacterized LOC90784
LRRC39 leucine rich repeat containing 39
MB21D2 Mab-21 domain containing 2
MFF mitochondrial fission factor
MINPP1 multiple inositol-polyphosphate phosphatase 1
MKRN3 makorin ring finger protein 3
MROH2B maestro heat-like repeat family member 2B
MS4A14 membrane-spanning 4-domains, subfamily A, member 14
MSANTD2 Myb/SANT-like DNA-binding domain containing 2
MTF2 metal response element binding transcription factor 2
MTMR2 myotubularin related protein 2
MYOZ2 myozenin 2
N4BP2L2 NEDD4 binding protein 2-like 2
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NBPF15 neuroblastoma breakpoint family, member 15
NFIB nuclear factor I/B
NOX1 NADPH oxidase 1
OLIG2 oligodendrocyte lineage transcription factor 2
OR11H4 olfactory receptor, family 11, subfamily H, member 4
OR13J1 olfactory receptor, family 13, subfamily J, member 1
OR2C3 olfactory receptor, family 2, subfamily C, member 3
OR2Y1 olfactory receptor, family 2, subfamily Y, member 1
OR4F29 olfactory receptor, family 4, subfamily F, member 29
OR4M2 olfactory receptor, family 4, subfamily M, member 2
OR51I1 olfactory receptor, family 51, subfamily I, member 1
OR52B6 olfactory receptor, family 52, subfamily B, member 6
OR7D2 olfactory receptor, family 7, subfamily D, member 2
PAPD4 PAP associated domain containing 4
PCDH15 protocadherin-related 15
PCDHB18P protocadherin beta 18 pseudogene
PCDHB19P protocadherin beta 19 pseudogene
PCDHB7 protocadherin beta 7
PCDHGB1 protocadherin gamma subfamily B, 1
PCGF6 polycomb group ring finger 6
PDC phosducin
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PDGFC platelet derived growth factor C
PEX5 peroxisomal biogenesis factor 5
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PLA2G12B phospholipase A2, group XIIB
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PRDM14 PR domain containing 14
PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
PRO0628 uncharacterized LOC29053
PRR23A proline rich 23A
PRR25 proline rich 25
PRSS38 protease, serine, 38
PSG8 pregnancy specific beta-1-glycoprotein 8
PTCH1 patched 1
RCC1 regulator of chromosome condensation 1
RCL1 RNA terminal phosphate cyclase-like 1
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
ROCK1 Rho-associated, coiled-coil containing protein kinase 1
RPL29P2 ribosomal protein L29 pseudogene 2
RTTN rotatin
RYK receptor-like tyrosine kinase
SCLT1 sodium channel and clathrin linker 1
SCP2D1 SCP2 sterol-binding domain containing 1
SFMBT1 Scm-like with four mbt domains 1
SFXN2 sideroflexin 2
SH3BP1 SH3-domain binding protein 1
SLC38A4 solute carrier family 38, member 4
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA65 small nucleolar RNA, H/ACA box 65
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
STK33 serine/threonine kinase 33
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
SUZ12P1 suppressor of zeste 12 homolog pseudogene 1
TAS2R14 taste receptor, type 2, member 14
TBPL2 TATA box binding protein like 2
TCF12 transcription factor 12
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box)
TECRL trans-2,3-enoyl-CoA reductase-like
TIGD1 tigger transposable element derived 1
TIGD2 tigger transposable element derived 2
TMCC1 transmembrane and coiled-coil domain family 1
TMEFF2 transmembrane protein with EGF-like and two follistatin-like domains 2
TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough
TMEM95 transmembrane protein 95
TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1
TRIM50 tripartite motif containing 50
TRIT1 tRNA isopentenyltransferase 1
TRPC2 transient receptor potential cation channel, subfamily C, member 2, pseudogene
TSEN15 TSEN15 tRNA splicing endonuclease subunit
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
UBE2R2 ubiquitin-conjugating enzyme E2R 2
USP50 ubiquitin specific peptidase 50
WNT5A wingless-type MMTV integration site family, member 5A
ZBTB12 zinc finger and BTB domain containing 12
ZFYVE16 zinc finger, FYVE domain containing 16
ZNF124 zinc finger protein 124
ZNF182 zinc finger protein 182
ZNF222 zinc finger protein 222
ZNF285 zinc finger protein 285
ZNF419 zinc finger protein 419
ZNF552 zinc finger protein 552
ZNF586 zinc finger protein 586
ZNF594 zinc finger protein 594
ZNF674 zinc finger protein 674
ZNF75A zinc finger protein 75a
ZNF781 zinc finger protein 781
ZNF804A zinc finger protein 804A
ZNF814 zinc finger protein 814
ZNF836 zinc finger protein 836
ZSCAN16 zinc finger and SCAN domain containing 16