Brain Lower Grade Glioma_LGG_TCGA-TQ-A8XE-02A-11R-A36H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

216 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TQ-A8XE-02A-11R-A36H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL4 arylacetamide deacetylase-like 4
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1
ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
ACP2 acid phosphatase 2, lysosomal
ADA adenosine deaminase
ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif, 14
ADAT3 adenosine deaminase, tRNA-specific 3
ADGRF4 adhesion G protein-coupled receptor F4
AFAP1L2 actin filament associated protein 1-like 2
AGRN agrin
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
AKAP17A A kinase (PRKA) anchor protein 17A
ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
AMBRA1 autophagy/beclin-1 regulator 1
ARHGAP1 Rho GTPase activating protein 1
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ARSB arylsulfatase B
ASMTL acetylserotonin O-methyltransferase-like
ASTN2 astrotactin 2
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
BAAT bile acid CoA:amino acid N-acyltransferase
BCAR1 breast cancer anti-estrogen resistance 1
BICD2 bicaudal D homolog 2 (Drosophila)
BMP8B bone morphogenetic protein 8b
BST2 bone marrow stromal cell antigen 2
C18ORF21 chromosome 18 open reading frame 21
C1QBP complement component 1, q subcomponent binding protein
C1QTNF9B-AS1 C1QTNF9B antisense RNA 1
C22ORF34 chromosome 22 open reading frame 34
C7ORF61 chromosome 7 open reading frame 61
C9ORF135 chromosome 9 open reading frame 135
CD99 CD99 molecule
CDC123 cell division cycle 123
CDR2L cerebellar degeneration-related protein 2-like
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CES5A carboxylesterase 5A
CLCN7 chloride channel, voltage-sensitive 7
CMTM5 CKLF-like MARVEL transmembrane domain containing 5
COL20A1 collagen, type XX, alpha 1
CORO7 coronin 7
CRYBA4 crystallin, beta A4
CYCSP52 cytochrome c, somatic pseudogene 52
DEFB124 defensin, beta 124
DEFB126 defensin, beta 126
DEPDC4 DEP domain containing 4
DHRS1 dehydrogenase/reductase (SDR family) member 1
DHRSX dehydrogenase/reductase (SDR family) X-linked
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1
DPPA5 developmental pluripotency associated 5
EEF2K eukaryotic elongation factor 2 kinase
FAHD1 fumarylacetoacetate hydrolase domain containing 1
FAM150B family with sequence similarity 150, member B
FAM188A family with sequence similarity 188, member A
FBXO18 F-box protein, helicase, 18
FBXO31 F-box protein 31
FBXO7 F-box protein 7
FMO5 flavin containing monooxygenase 5
FRMD4A FERM domain containing 4A
FRMD5 FERM domain containing 5
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18
GALNT9 polypeptide N-acetylgalactosaminyltransferase 9
GDI2 GDP dissociation inhibitor 2
GHSR growth hormone secretagogue receptor
GJA3 gap junction protein, alpha 3, 46kDa
GPR89B G protein-coupled receptor 89B
GPX5 glutathione peroxidase 5
GUCY2EP guanylate cyclase 2E, pseudogene
HACD1 3-hydroxyacyl-CoA dehydratase 1
HARBI1 harbinger transposase derived 1
HLA-G major histocompatibility complex, class I, G
HM13 histocompatibility (minor) 13
HPR haptoglobin-related protein
HSPA14 heat shock 70kDa protein 14
IAPP islet amyloid polypeptide
IFI6 interferon, alpha-inducible protein 6
IFIT1 interferon-induced protein with tetratricopeptide repeats 1
IGSF11 immunoglobulin superfamily, member 11
IL9 interleukin 9
IRF9 interferon regulatory factor 9
ISG15 ISG15 ubiquitin-like modifier
IVD isovaleryl-CoA dehydrogenase
KCNK6 potassium channel, two pore domain subfamily K, member 6
KCNS3 potassium voltage-gated channel, modifier subfamily S, member 3
KDM4A lysine (K)-specific demethylase 4A
KIAA1462 KIAA1462
KIAA2013 KIAA2013
KIF2B kinesin family member 2B
KLHL6 kelch-like family member 6
LARP4B La ribonucleoprotein domain family, member 4B
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein
LMF1 lipase maturation factor 1
LOC146481
LOC643486
LOC644172 mitogen-activated protein kinase 8 interacting protein 1 pseudogene
LOH12CR1 loss of heterozygosity, 12, chromosomal region 1
MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1
MED28 mediator complex subunit 28
MGC16025 uncharacterized LOC85009
MTCH2 mitochondrial carrier 2
MXD4 MAX dimerization protein 4
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit
NAT1 N-acetyltransferase 1 (arylamine N-acetyltransferase)
NEU4 sialidase 4
NOMO1 NODAL modulator 1
NUDT5 nudix (nucleoside diphosphate linked moiety X)-type motif 5
OLAH oleoyl-ACP hydrolase
OR4X2 olfactory receptor, family 4, subfamily X, member 2 (gene/pseudogene)
OR52K1 olfactory receptor, family 52, subfamily K, member 1
OR5B21 olfactory receptor, family 5, subfamily B, member 21
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1
PCDHA9 protocadherin alpha 9
PCDHGB4 protocadherin gamma subfamily B, 4
PDILT protein disulfide isomerase-like, testis expressed
PI4KB phosphatidylinositol 4-kinase, catalytic, beta
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
PITRM1 pitrilysin metallopeptidase 1
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
POLG polymerase (DNA directed), gamma
PPP2R3B protein phosphatase 2, regulatory subunit B'', beta
PRDX1 peroxiredoxin 1
PRKACG protein kinase, cAMP-dependent, catalytic, gamma
PRPF18 pre-mRNA processing factor 18
PRTFDC1 phosphoribosyl transferase domain containing 1
PTGER3 prostaglandin E receptor 3 (subtype EP3)
PXDNL peroxidasin-like
PXYLP1 2-phosphoxylose phosphatase 1
QPRT quinolinate phosphoribosyltransferase
RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1
RAVER2 ribonucleoprotein, PTB-binding 2
RBM17 RNA binding motif protein 17
RBP3 retinol binding protein 3, interstitial
REC8 REC8 meiotic recombination protein
REM1 RAS (RAD and GEM)-like GTP-binding 1
RENBP renin binding protein
RPP38 ribonuclease P/MRP 38kDa subunit
RWDD2B RWD domain containing 2B
S1PR3 sphingosine-1-phosphate receptor 3
SCAMP4 secretory carrier membrane protein 4
SCARNA15 small Cajal body-specific RNA 15
SCRG1 stimulator of chondrogenesis 1
SH3BP1 SH3-domain binding protein 1
SH3PXD2B SH3 and PX domains 2B
SLC22A23 solute carrier family 22, member 23
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
SLC27A4 solute carrier family 27 (fatty acid transporter), member 4
SLC34A3 solute carrier family 34 (type II sodium/phosphate cotransporter), member 3
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA55 small nucleolar RNA, H/ACA box 55
SNORA71A small nucleolar RNA, H/ACA box 71A
SNORA75 small nucleolar RNA, H/ACA box 75
SPATA6 spermatogenesis associated 6
SPTA1 spectrin, alpha, erythrocytic 1
SSPO SCO-spondin
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
STAMBP STAM binding protein
STAT1 signal transducer and activator of transcription 1, 91kDa
STRADB STE20-related kinase adaptor beta
TAS2R8 taste receptor, type 2, member 8
TBX22 T-box 22
TMCO2 transmembrane and coiled-coil domains 2
TMEM174 transmembrane protein 174
TNIP2 TNFAIP3 interacting protein 2
TOP3B topoisomerase (DNA) III beta
TPRXL tetra-peptide repeat homeobox-like
TRIM62 tripartite motif containing 62
TRIM69 tripartite motif containing 69
TRIT1 tRNA isopentenyltransferase 1
TSPAN15 tetraspanin 15
UBE2G1 ubiquitin-conjugating enzyme E2G 1
UBE2I ubiquitin-conjugating enzyme E2I
USP6NL USP6 N-terminal like
VASH1 vasohibin 1
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
YME1L1 YME1-like 1 ATPase
ZAR1L zygote arrest 1-like
ZBED1 zinc finger, BED-type containing 1
ZDHHC9 zinc finger, DHHC-type containing 9
ZFP57 ZFP57 zinc finger protein
ZNF174 zinc finger protein 174
ZNF189 zinc finger protein 189

low expression

Symbol Name
CCDC43 coiled-coil domain containing 43
CHMP5 charged multivesicular body protein 5
DHRS4-AS1 DHRS4 antisense RNA 1
ECHDC1 ethylmalonyl-CoA decarboxylase 1
EIF1AX eukaryotic translation initiation factor 1A, X-linked
GSPT2 G1 to S phase transition 2
HINT3 histidine triad nucleotide binding protein 3
LOC100129550 uncharacterized LOC100129550
MRPL18 mitochondrial ribosomal protein L18
MTRF1L mitochondrial translational release factor 1-like
NFX1 nuclear transcription factor, X-box binding 1
NOL6 nucleolar protein 6 (RNA-associated)
NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2
PDZD11 PDZ domain containing 11
PEX3 peroxisomal biogenesis factor 3
PJA1 praja ring finger 1, E3 ubiquitin protein ligase
RAD51C RAD51 paralog C
RLIM ring finger protein, LIM domain interacting
RNF38 ring finger protein 38
SEC63 SEC63 homolog (S. cerevisiae)
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
SNX3 sorting nexin 3
SOBP sine oculis binding protein homolog (Drosophila)
TCP1 t-complex 1
UBAP1 ubiquitin associated protein 1
VTA1 vesicle (multivesicular body) trafficking 1
ZCCHC7 zinc finger, CCHC domain containing 7
ZMYM3 zinc finger, MYM-type 3
ZNF674 zinc finger protein 674
ZNHIT3 zinc finger, HIT-type containing 3