Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RV-01A-21R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

239 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RV-01A-21R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABLIM3 actin binding LIM protein family, member 3
ACAD8 acyl-CoA dehydrogenase family, member 8
ACRC acidic repeat containing
ACTR3BP2 ACTR3B pseudogene 2
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ADORA2A-AS1 ADORA2A antisense RNA 1
AGTR2 angiotensin II receptor, type 2
AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1
AKR7L aldo-keto reductase family 7-like (gene/pseudogene)
AMY2A amylase, alpha 2A (pancreatic)
ANKRD36 ankyrin repeat domain 36
ANO9 anoctamin 9
ANP32A-IT1 ANP32A intronic transcript 1
AP1G2 adaptor-related protein complex 1, gamma 2 subunit
ARHGAP32 Rho GTPase activating protein 32
ARHGAP39 Rho GTPase activating protein 39
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ARL13A ADP-ribosylation factor-like 13A
ASMTL-AS1 ASMTL antisense RNA 1
AWAT2 acyl-CoA wax alcohol acyltransferase 2
BCAR4 breast cancer anti-estrogen resistance 4 (non-protein coding)
BOP1 block of proliferation 1
C20ORF203 chromosome 20 open reading frame 203
C2ORF27B chromosome 2 open reading frame 27B
C3ORF35 chromosome 3 open reading frame 35
C7ORF66 chromosome 7 open reading frame 66
C8A complement component 8, alpha polypeptide
CCDC144CP coiled-coil domain containing 144C, pseudogene
CCDC172 coiled-coil domain containing 172
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CEP164 centrosomal protein 164kDa
CEP192 centrosomal protein 192kDa
CHRM4 cholinergic receptor, muscarinic 4
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
COL6A4P2 collagen, type VI, alpha 4 pseudogene 2
COMMD5 COMM domain containing 5
COX8C cytochrome c oxidase subunit VIIIC
CROCCP3 ciliary rootlet coiled-coil, rootletin pseudogene 3
CSAD cysteine sulfinic acid decarboxylase
CST13P cystatin 13, pseudogene
CTU1 cytosolic thiouridylase subunit 1
CYP2B7P cytochrome P450, family 2, subfamily B, polypeptide 7, pseudogene
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DEFB109P1B defensin, beta 109, pseudogene 1B
DEFB124 defensin, beta 124
DGCR10 DiGeorge syndrome critical region gene 10 (non-protein coding)
DKFZP434J0226 uncharacterized LOC93429
DPPA5 developmental pluripotency associated 5
DUXA double homeobox A
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3
ESX1 ESX homeobox 1
EVX1 even-skipped homeobox 1
FAM171A1 family with sequence similarity 171, member A1
FAM69A family with sequence similarity 69, member A
FAM71B family with sequence similarity 71, member B
FAM71C family with sequence similarity 71, member C
FAM83H family with sequence similarity 83, member H
FAM92A1 family with sequence similarity 92, member A1
FOLH1B folate hydrolase 1B
GAGE2D G antigen 2D
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GIP gastric inhibitory polypeptide
GLIPR1L1 GLI pathogenesis-related 1 like 1
GOLGA6L10 golgin A6 family-like 10
GOLGA8A golgin A8 family, member A
GOLGA8B golgin A8 family, member B
GPR32 G protein-coupled receptor 32
GRXCR1 glutaredoxin, cysteine rich 1
GUSBP4 glucuronidase, beta pseudogene 4
GYPA glycophorin A (MNS blood group)
HES4 hes family bHLH transcription factor 4
HIC2 hypermethylated in cancer 2
HINFP histone H4 transcription factor
HSFY2 heat shock transcription factor, Y linked 2
IFFO2 intermediate filament family orphan 2
IFNK interferon, kappa
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1
IL12A interleukin 12A
IRGC immunity-related GTPase family, cinema
ITPK1-AS1 ITPK1 antisense RNA 1
JRK Jrk homolog (mouse)
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KRTAP11-1 keratin associated protein 11-1
KRTAP13-3 keratin associated protein 13-3
KRTAP4-4 keratin associated protein 4-4
LCE1F late cornified envelope 1F
LENG8 leukocyte receptor cluster (LRC) member 8
LINC00032 long intergenic non-protein coding RNA 32
LINC00051 long intergenic non-protein coding RNA 51
LINC00161 long intergenic non-protein coding RNA 161
LINC00597 long intergenic non-protein coding RNA 597
LOC100130987 uncharacterized LOC100130987
LOC100132287 uncharacterized LOC100132287
LOC100133331 uncharacterized LOC100133331
LOC283332 uncharacterized LOC283332
LOC284009 uncharacterized LOC284009
LOC646471 uncharacterized LOC646471
LOC90834
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
LRRC4B leucine rich repeat containing 4B
MBOAT4 membrane bound O-acyltransferase domain containing 4
MRGPRX3 MAS-related GPR, member X3
MROH6 maestro heat-like repeat family member 6
MROH9 maestro heat-like repeat family member 9
MSANTD2 Myb/SANT-like DNA-binding domain containing 2
MTMR1 myotubularin related protein 1
MUC7 mucin 7, secreted
MYH3 myosin, heavy chain 3, skeletal muscle, embryonic
NANOG Nanog homeobox
NAPSA napsin A aspartic peptidase
NBPF15 neuroblastoma breakpoint family, member 15
NBPF7 neuroblastoma breakpoint family, member 7
NEUROG3 neurogenin 3
NFRKB nuclear factor related to kappaB binding protein
NKTR natural killer cell triggering receptor
NLRP13 NLR family, pyrin domain containing 13
NMB neuromedin B
NPHP3 nephronophthisis 3 (adolescent)
NRBP2 nuclear receptor binding protein 2
NT5DC3 5'-nucleotidase domain containing 3
NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17
NUTM2D NUT family member 2D
NUTM2G NUT family member 2G
OCM2 oncomodulin 2
OR1B1 olfactory receptor, family 1, subfamily B, member 1 (gene/pseudogene)
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR1L6 olfactory receptor, family 1, subfamily L, member 6
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR2J3 olfactory receptor, family 2, subfamily J, member 3
OR51B6 olfactory receptor, family 51, subfamily B, member 6
OR51Q1 olfactory receptor, family 51, subfamily Q, member 1 (gene/pseudogene)
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR56A1 olfactory receptor, family 56, subfamily A, member 1
OR6B1 olfactory receptor, family 6, subfamily B, member 1
OR6C1 olfactory receptor, family 6, subfamily C, member 1
OR8A1 olfactory receptor, family 8, subfamily A, member 1
OTUD6A OTU deubiquitinase 6A
OVGP1 oviductal glycoprotein 1, 120kDa
PAGE1 P antigen family, member 1 (prostate associated)
PCDHGB1 protocadherin gamma subfamily B, 1
PCTP phosphatidylcholine transfer protein
PDC phosducin
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2
PITRM1 pitrilysin metallopeptidase 1
PLGLB2 plasminogen-like B2
POGZ pogo transposable element with ZNF domain
PPIEL peptidylprolyl isomerase E-like pseudogene
PRAMEF6 PRAME family member 6
PRICKLE4 prickle homolog 4 (Drosophila)
PRO0628 uncharacterized LOC29053
PROM2 prominin 2
PRSS37 protease, serine, 37
PRSS41 protease, serine, 41
PSCA prostate stem cell antigen
PSG3 pregnancy specific beta-1-glycoprotein 3
PTCHD2 patched domain containing 2
RAX2 retina and anterior neural fold homeobox 2
RET ret proto-oncogene
RGAG1 retrotransposon gag domain containing 1
RGPD1 RANBP2-like and GRIP domain containing 1
RGPD8 RANBP2-like and GRIP domain containing 8
RGS21 regulator of G-protein signaling 21
RHOXF1 Rhox homeobox family, member 1
RMDN1 regulator of microtubule dynamics 1
RNF113B ring finger protein 113B
RNF207 ring finger protein 207
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
SCGB1C1 secretoglobin, family 1C, member 1
SCHIP1 schwannomin interacting protein 1
SETD5 SET domain containing 5
SGSM2 small G protein signaling modulator 2
SIDT2 SID1 transmembrane family, member 2
SKOR1 SKI family transcriptional corepressor 1
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC13A1 solute carrier family 13 (sodium/sulfate symporter), member 1
SLC16A9 solute carrier family 16, member 9
SLC22A14 solute carrier family 22, member 14
SLC35G6 solute carrier family 35, member G6
SLC36A2 solute carrier family 36 (proton/amino acid symporter), member 2
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLC7A13 solute carrier family 7 (anionic amino acid transporter), member 13
SLC7A5P2 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2
SNHG4 small nucleolar RNA host gene 4
SNORA24 small nucleolar RNA, H/ACA box 24
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA47 small nucleolar RNA, H/ACA box 47
SNORA59B small nucleolar RNA, H/ACA box 59B
SNORA5A small nucleolar RNA, H/ACA box 5A
SNORA61 small nucleolar RNA, H/ACA box 61
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1)
SNX29P2 sorting nexin 29 pseudogene 2
SPACA4 sperm acrosome associated 4
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
STAG3L2 stromal antigen 3-like 2 (pseudogene)
TARBP1 TAR (HIV-1) RNA binding protein 1
TAS2R39 taste receptor, type 2, member 39
TAS2R5 taste receptor, type 2, member 5
TBC1D3F TBC1 domain family, member 3F
TBPL1 TBP-like 1
TEX37 testis expressed 37
TMED6 transmembrane emp24 protein transport domain containing 6
TMEM136 transmembrane protein 136
TMEM145 transmembrane protein 145
TMEM213 transmembrane protein 213
TOPAZ1 testis and ovary specific PAZ domain containing 1
TPP2 tripeptidyl peptidase II
TRDMT1 tRNA aspartic acid methyltransferase 1
UBQLN3 ubiquilin 3
WDR11 WD repeat domain 11
WDR77 WD repeat domain 77
ZFAND4 zinc finger, AN1-type domain 4
ZIM3 zinc finger, imprinted 3
ZNF16 zinc finger protein 16
ZNF250 zinc finger protein 250
ZNF251 zinc finger protein 251
ZNF252P zinc finger protein 252, pseudogene
ZNF252P-AS1 ZNF252P antisense RNA 1
ZNF34 zinc finger protein 34
ZNF497 zinc finger protein 497
ZNF517 zinc finger protein 517
ZNF518A zinc finger protein 518A
ZNF577 zinc finger protein 577
ZNF595 zinc finger protein 595
ZNF613 zinc finger protein 613
ZNF614 zinc finger protein 614
ZNF615 zinc finger protein 615
ZNF7 zinc finger protein 7
ZNF703 zinc finger protein 703
ZNF705D zinc finger protein 705D
ZNF707 zinc finger protein 707
ZNF766 zinc finger protein 766
ZNF83 zinc finger protein 83
ZNF836 zinc finger protein 836
ZNF841 zinc finger protein 841

low expression

Symbol Name
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
PBDC1 polysaccharide biosynthesis domain containing 1