Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RS-01A-12R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

293 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RS-01A-12R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA17P ATP-binding cassette, sub-family A (ABC1), member 17, pseudogene
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group)
ACR acrosin
ACTR5 ARP5 actin-related protein 5 homolog (yeast)
ADAM29 ADAM metallopeptidase domain 29
ADGRG1 adhesion G protein-coupled receptor G1
ADIPOR2 adiponectin receptor 2
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
AMH anti-Mullerian hormone
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
ANO8 anoctamin 8
APC2 adenomatosis polyposis coli 2
ARHGAP27 Rho GTPase activating protein 27
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ARL4D ADP-ribosylation factor-like 4D
ASIC1 acid sensing (proton gated) ion channel 1
ATG13 autophagy related 13
ATP11AUN ATP11A upstream neighbor
ATP6V1B1 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1
BAIAP2L2 BAI1-associated protein 2-like 2
BCAR1 breast cancer anti-estrogen resistance 1
BMP2 bone morphogenetic protein 2
BMPER BMP binding endothelial regulator
BTNL2 butyrophilin-like 2
BTNL9 butyrophilin-like 9
C10ORF113 chromosome 10 open reading frame 113
C15ORF53 chromosome 15 open reading frame 53
C16ORF78 chromosome 16 open reading frame 78
C17ORF100 chromosome 17 open reading frame 100
C17ORF47 chromosome 17 open reading frame 47
C20ORF144 chromosome 20 open reading frame 144
C2CD4C C2 calcium-dependent domain containing 4C
C2ORF78 chromosome 2 open reading frame 78
C3P1 complement component 3 precursor pseudogene
C7ORF61 chromosome 7 open reading frame 61
CA10 carbonic anhydrase X
CACNG4 calcium channel, voltage-dependent, gamma subunit 4
CAMSAP3 calmodulin regulated spectrin-associated protein family, member 3
CBS cystathionine-beta-synthase
CBWD5 COBW domain containing 5
CCBL1 cysteine conjugate-beta lyase, cytoplasmic
CCDC154 coiled-coil domain containing 154
CCDC42 coiled-coil domain containing 42
CCNI2 cyclin I family, member 2
CD300LG CD300 molecule-like family member g
CDA cytidine deaminase
CECR6 cat eye syndrome chromosome region, candidate 6
CHP2 calcineurin-like EF-hand protein 2
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CLEC4F C-type lectin domain family 4, member F
CMKLR1 chemerin chemokine-like receptor 1
CORO6 coronin 6
CPNE5 copine V
CSAD cysteine sulfinic acid decarboxylase
CSDC2 cold shock domain containing C2, RNA binding
CSNK1E casein kinase 1, epsilon
CSPG4 chondroitin sulfate proteoglycan 4
CYP27C1 cytochrome P450, family 27, subfamily C, polypeptide 1
D2HGDH D-2-hydroxyglutarate dehydrogenase
DHPS deoxyhypusine synthase
DSCAML1 Down syndrome cell adhesion molecule like 1
EBF4 early B-cell factor 4
EEFSEC eukaryotic elongation factor, selenocysteine-tRNA-specific
EFHB EF-hand domain family, member B
ELFN2 extracellular leucine-rich repeat and fibronectin type III domain containing 2
EPB41L4A erythrocyte membrane protein band 4.1 like 4A
EPN2 epsin 2
EQTN equatorin, sperm acrosome associated
ERAS ES cell expressed Ras
EVI5L ecotropic viral integration site 5-like
EXD3 exonuclease 3'-5' domain containing 3
FAM109A family with sequence similarity 109, member A
FAM131C family with sequence similarity 131, member C
FAM193B family with sequence similarity 193, member B
FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
FAM201A family with sequence similarity 201, member A
FAM46D family with sequence similarity 46, member D
FAM66E family with sequence similarity 66, member E
FBXO7 F-box protein 7
FDPS farnesyl diphosphate synthase
FGFBP3 fibroblast growth factor binding protein 3
FGFR4 fibroblast growth factor receptor 4
FHDC1 FH2 domain containing 1
FIGLA folliculogenesis specific basic helix-loop-helix
FLJ10038 uncharacterized protein FLJ10038
FLJ33360 FLJ33360 protein
FLJ42393 uncharacterized LOC401105
FOXG1 forkhead box G1
FOXP4 forkhead box P4
GAGE2D G antigen 2D
GAL3ST1 galactose-3-O-sulfotransferase 1
GATSL3 GATS protein-like 3
GGT1 gamma-glutamyltransferase 1
GOLGA6L9 golgin A6 family-like 9
GOLGA8EP golgin A8 family, member E, pseudogene
GPR35 G protein-coupled receptor 35
GPR89B G protein-coupled receptor 89B
GPSM1 G-protein signaling modulator 1
GPX6 glutathione peroxidase 6
GRID1 glutamate receptor, ionotropic, delta 1
H1FX-AS1 H1FX antisense RNA 1
H2BFWT H2B histone family, member W, testis-specific
HBQ1 hemoglobin, theta 1
HCG4 HLA complex group 4 (non-protein coding)
HDAC5 histone deacetylase 5
HEXDC hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
HIF3A hypoxia inducible factor 3, alpha subunit
HIP1R huntingtin interacting protein 1 related
HIST1H4J histone cluster 1, H4j
HSD17B1 hydroxysteroid (17-beta) dehydrogenase 1
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
HSF2BP heat shock transcription factor 2 binding protein
HTRA1 HtrA serine peptidase 1
IFITM4P interferon induced transmembrane protein 4 pseudogene
IGBP1 immunoglobulin (CD79A) binding protein 1
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
IL11RA interleukin 11 receptor, alpha
IL3 interleukin 3
KAT2A K(lysine) acetyltransferase 2A
KAZN kazrin, periplakin interacting protein
KCNAB3 potassium channel, voltage gated subfamily A regulatory beta subunit 3
KCNF1 potassium channel, voltage gated modifier subfamily F, member 1
KCNIP3 Kv channel interacting protein 3, calsenilin
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNK16 potassium channel, two pore domain subfamily K, member 16
KHDC3L KH domain containing 3-like, subcortical maternal complex member
KIAA1755 KIAA1755
KIAA1875 KIAA1875
KIF26A kinesin family member 26A
KIZ kizuna centrosomal protein
KLC4 kinesin light chain 4
KLK9 kallikrein-related peptidase 9
LAMA3 laminin, alpha 3
LAMB2P1 laminin, beta 2 pseudogene 1
LAT linker for activation of T cells
LAYN layilin
LHX5 LIM homeobox 5
LINC00158 long intergenic non-protein coding RNA 158
LINC00593 long intergenic non-protein coding RNA 593
LINC01599 long intergenic non-protein coding RNA 1599
LOC100270804 uncharacterized LOC100270804
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
LRRC75B leucine rich repeat containing 75B
LRRN4 leucine rich repeat neuronal 4
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MAGEA9B melanoma antigen family A9B
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
MEGF11 multiple EGF-like-domains 11
MFGE8 milk fat globule-EGF factor 8 protein
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MIMT1 MER1 repeat containing imprinted transcript 1 (non-protein coding)
MROH2B maestro heat-like repeat family member 2B
MST1 macrophage stimulating 1
MTSS1L metastasis suppressor 1-like
MUM1 melanoma associated antigen (mutated) 1
MVD mevalonate (diphospho) decarboxylase
MYT1 myelin transcription factor 1
N4BP2L2-IT2 N4BPL2 intronic transcript 2
NAGS N-acetylglutamate synthase
NEIL1 nei endonuclease VIII-like 1 (E. coli)
NLGN2 neuroligin 2
NME3 NME/NM23 nucleoside diphosphate kinase 3
NOG noggin
NOX1 NADPH oxidase 1
NOXA1 NADPH oxidase activator 1
NPRL3 nitrogen permease regulator-like 3 (S. cerevisiae)
NR0B1 nuclear receptor subfamily 0, group B, member 1
NRARP NOTCH-regulated ankyrin repeat protein
NSDHL NAD(P) dependent steroid dehydrogenase-like
NUP210 nucleoporin 210kDa
OCM2 oncomodulin 2
ODF1 outer dense fiber of sperm tails 1
OLIG1 oligodendrocyte transcription factor 1
OLIG2 oligodendrocyte lineage transcription factor 2
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR52B2 olfactory receptor, family 52, subfamily B, member 2
OR52D1 olfactory receptor, family 52, subfamily D, member 1
PAGE2 P antigen family, member 2 (prostate associated)
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PCBP4 poly(rC) binding protein 4
PCDHGB2 protocadherin gamma subfamily B, 2
PCED1A PC-esterase domain containing 1A
PDZK1P1 PDZ domain containing 1 pseudogene 1
PEX6 peroxisomal biogenesis factor 6
PHF1 PHD finger protein 1
PKD1L3 polycystic kidney disease 1-like 3
PLA2G1B phospholipase A2, group IB (pancreas)
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PNPLA7 patatin-like phospholipase domain containing 7
POLR2F polymerase (RNA) II (DNA directed) polypeptide F
POU1F1 POU class 1 homeobox 1
PPIEL peptidylprolyl isomerase E-like pseudogene
PPP1R10 protein phosphatase 1, regulatory subunit 10
PRSS41 protease, serine, 41
PRSS50 protease, serine, 50
PTPN23 protein tyrosine phosphatase, non-receptor type 23
RAB19 RAB19, member RAS oncogene family
RAB33A RAB33A, member RAS oncogene family
RALGDS ral guanine nucleotide dissociation stimulator
RASL10A RAS-like, family 10, member A
RASSF4 Ras association (RalGDS/AF-6) domain family member 4
RBP3 retinol binding protein 3, interstitial
RGCC regulator of cell cycle
RGPD8 RANBP2-like and GRIP domain containing 8
RNF215 ring finger protein 215
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RPAP1 RNA polymerase II associated protein 1
RPUSD2 RNA pseudouridylate synthase domain containing 2
RTKN rhotekin
RUSC1-AS1 RUSC1 antisense RNA 1
SCARNA9L small Cajal body-specific RNA 9-like
SF3A1 splicing factor 3a, subunit 1, 120kDa
SF3A2 splicing factor 3a, subunit 2, 66kDa
SFSWAP splicing factor, suppressor of white-apricot family
SGSM3 small G protein signaling modulator 3
SH2B1 SH2B adaptor protein 1
SH2B2 SH2B adaptor protein 2
SH2D6 SH2 domain containing 6
SHC2 SHC (Src homology 2 domain containing) transforming protein 2
SLAIN1 SLAIN motif family, member 1
SLC22A17 solute carrier family 22, member 17
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5
SLC25A41 solute carrier family 25, member 41
SLC35F1 solute carrier family 35, member F1
SLC39A5 solute carrier family 39 (zinc transporter), member 5
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA56 small nucleolar RNA, H/ACA box 56
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA77 small nucleolar RNA, H/ACA box 77
SORCS3 sortilin-related VPS10 domain containing receptor 3
SOX8 SRY (sex determining region Y)-box 8
SPATA9 spermatogenesis associated 9
SPSB3 splA/ryanodine receptor domain and SOCS box containing 3
SRSF5 serine/arginine-rich splicing factor 5
SUGT1P3 SUGT1 pseudogene 3
SYCE2 synaptonemal complex central element protein 2
TAAR2 trace amine associated receptor 2
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TBC1D10A TBC1 domain family, member 10A
TBC1D29 TBC1 domain family, member 29
TBC1D3H TBC1 domain family, member 3H
TBKBP1 TBK1 binding protein 1
TBX6 T-box 6
TDRD6 tudor domain containing 6
TGM1 transglutaminase 1
TLDC2 TBC/LysM-associated domain containing 2
TLE2 transducin-like enhancer of split 2
TLE6 transducin-like enhancer of split 6
TMEM121 transmembrane protein 121
TMEM196 transmembrane protein 196
TMEM202 transmembrane protein 202
TMEM249 transmembrane protein 249
TMEM74B transmembrane protein 74B
TNK2 tyrosine kinase, non-receptor, 2
TPCN1 two pore segment channel 1
TPRX1 tetra-peptide repeat homeobox 1
TPSD1 tryptase delta 1
TPTE2P3 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3
TRAF1 TNF receptor-associated factor 1
TRAPPC12 trafficking protein particle complex 12
TSC2 tuberous sclerosis 2
UGT2A3 UDP glucuronosyltransferase 2 family, polypeptide A3
UNKL unkempt family zinc finger-like
USP44 ubiquitin specific peptidase 44
USP50 ubiquitin specific peptidase 50
USP54 ubiquitin specific peptidase 54
VAX2 ventral anterior homeobox 2
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
WASH7P WAS protein family homolog 7 pseudogene
WDR24 WD repeat domain 24
WDR27 WD repeat domain 27
WDR33 WD repeat domain 33
WWP2 WW domain containing E3 ubiquitin protein ligase 2
XAB2 XPA binding protein 2
ZCCHC24 zinc finger, CCHC domain containing 24
ZFPM1 zinc finger protein, FOG family member 1
ZNF219 zinc finger protein 219
ZNF276 zinc finger protein 276
ZNF408 zinc finger protein 408
ZNF534 zinc finger protein 534
ZNF775 zinc finger protein 775
ZSWIM4 zinc finger, SWIM-type containing 4

low expression

Symbol Name
DHDDS dehydrodolichyl diphosphate synthase
EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4
FAF1 Fas (TNFRSF6) associated factor 1
RFX5 regulatory factor X, 5 (influences HLA class II expression)
SCO1 SCO1 cytochrome c oxidase assembly protein
WDR41 WD repeat domain 41