Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RR-01A-21R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

439 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RR-01A-21R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL4 arylacetamide deacetylase-like 4
AATK apoptosis-associated tyrosine kinase
ABCA2 ATP-binding cassette, sub-family A (ABC1), member 2
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
ACER1 alkaline ceramidase 1
ACPT acid phosphatase, testicular
ACRBP acrosin binding protein
ACTN2 actinin, alpha 2
ADAM5 ADAM metallopeptidase domain 5 (pseudogene)
ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif, 10
ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18
ADCY10 adenylate cyclase 10 (soluble)
ADGRB1 adhesion G protein-coupled receptor B1
AFM afamin
AGAP11 ankyrin repeat and GTPase domain Arf GTPase activating protein 11
AGAP5 ArfGAP with GTPase domain, ankyrin repeat and PH domain 5
AGPAT4-IT1 AGPAT4 intronic transcript 1
AHSA2 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
ALMS1P Alstrom syndrome 1 pseudogene
ALOX12 arachidonate 12-lipoxygenase
ANAPC2 anaphase promoting complex subunit 2
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle)
ANKZF1 ankyrin repeat and zinc finger domain containing 1
APBB3 amyloid beta (A4) precursor protein-binding, family B, member 3
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
APOC4 apolipoprotein C-IV
ARGLU1 arginine and glutamate rich 1
ARHGAP36 Rho GTPase activating protein 36
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ARTN artemin
ATP11AUN ATP11A upstream neighbor
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide
BCYRN1 brain cytoplasmic RNA 1
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
BTBD8 BTB (POZ) domain containing 8
C10ORF128 chromosome 10 open reading frame 128
C12ORF71 chromosome 12 open reading frame 71
C17ORF50 chromosome 17 open reading frame 50
C1GALT1C1 C1GALT1-specific chaperone 1
C1ORF111 chromosome 1 open reading frame 111
C20ORF144 chromosome 20 open reading frame 144
C20ORF197 chromosome 20 open reading frame 197
C3ORF20 chromosome 3 open reading frame 20
C5 complement component 5
C6ORF201 chromosome 6 open reading frame 201
C7ORF69 chromosome 7 open reading frame 69
C8G complement component 8, gamma polypeptide
C8ORF44 chromosome 8 open reading frame 44
C9ORF114 chromosome 9 open reading frame 114
C9ORF131 chromosome 9 open reading frame 131
C9ORF139 chromosome 9 open reading frame 139
C9ORF170 chromosome 9 open reading frame 170
C9ORF173 chromosome 9 open reading frame 173
CARD14 caspase recruitment domain family, member 14
CARNS1 carnosine synthase 1
CASP12 caspase 12 (gene/pseudogene)
CCDC17 coiled-coil domain containing 17
CCDC180 coiled-coil domain containing 180
CCDC183 coiled-coil domain containing 183
CCDC7 coiled-coil domain containing 7
CCL3L3 chemokine (C-C motif) ligand 3-like 3
CCNL2 cyclin L2
CD22 CD22 molecule
CDK11A cyclin-dependent kinase 11A
CDK5RAP3 CDK5 regulatory subunit associated protein 3
CECR5-AS1 CECR5 antisense RNA 1
CERCAM cerebral endothelial cell adhesion molecule
CHD2 chromodomain helicase DNA binding protein 2
CHKB-CPT1B CHKB-CPT1B readthrough (NMD candidate)
CIB3 calcium and integrin binding family member 3
CLASRP CLK4-associating serine/arginine rich protein
CLDN20 claudin 20
CLTCL1 clathrin, heavy chain-like 1
CNTN2 contactin 2 (axonal)
COL27A1 collagen, type XXVII, alpha 1
COL4A5 collagen, type IV, alpha 5
CPO carboxypeptidase O
CPOX coproporphyrinogen oxidase
CPSF4L cleavage and polyadenylation specific factor 4-like
CROCC ciliary rootlet coiled-coil, rootletin
CROCCP2 ciliary rootlet coiled-coil, rootletin pseudogene 2
CROCCP3 ciliary rootlet coiled-coil, rootletin pseudogene 3
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2
CST11 cystatin 11
CTSW cathepsin W
CYB5R4 cytochrome b5 reductase 4
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43
DBF4B DBF4 zinc finger B
DDTL D-dopachrome tautomerase-like
DFNB31 deafness, autosomal recessive 31
DHX34 DEAH (Asp-Glu-Ala-His) box polypeptide 34
DLEU2L deleted in lymphocytic leukemia 2-like
DNAH1 dynein, axonemal, heavy chain 1
DNAH17 dynein, axonemal, heavy chain 17
DNHD1 dynein heavy chain domain 1
DNM2 dynamin 2
DOCK5 dedicator of cytokinesis 5
DPPA3 developmental pluripotency associated 3
DST dystonin
EBF3 early B-cell factor 3
EFCAB13 EF-hand calcium binding domain 13
EME2 essential meiotic structure-specific endonuclease subunit 2
ENGASE endo-beta-N-acetylglucosaminidase
EPGN epithelial mitogen
EQTN equatorin, sperm acrosome associated
ESPNP espin pseudogene
FAM136BP family with sequence similarity 136, member B, pseudogene
FAM170A family with sequence similarity 170, member A
FAM223B family with sequence similarity 223, member B (non-protein coding)
FAM71F1 family with sequence similarity 71, member F1
FBXL8 F-box and leucine-rich repeat protein 8
FCHO1 FCH domain only 1
FFAR1 free fatty acid receptor 1
FGFR4 fibroblast growth factor receptor 4
FIGLA folliculogenesis specific basic helix-loop-helix
FLJ33360 FLJ33360 protein
FLJ37201 tigger transposable element derived 2 pseudogene
FMNL2 formin-like 2
FRYL FRY-like
FTX FTX transcript, XIST regulator (non-protein coding)
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6
GALR3 galanin receptor 3
GGT3P gamma-glutamyltransferase 3 pseudogene
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene
GH1 growth hormone 1
GIPR gastric inhibitory polypeptide receptor
GJA9 gap junction protein, alpha 9, 59kDa
GJB4 gap junction protein, beta 4, 30.3kDa
GLIS1 GLIS family zinc finger 1
GLP1R glucagon-like peptide 1 receptor
GLTPD2 glycolipid transfer protein domain containing 2
GOLGA2 golgin A2
GSTM2 glutathione S-transferase mu 2 (muscle)
GSTM2P1 glutathione S-transferase mu 2 (muscle) pseudogene 1
HAO2 hydroxyacid oxidase 2 (long chain)
HAPLN2 hyaluronan and proteoglycan link protein 2
HEMK1 HemK methyltransferase family member 1
HEXA-AS1 HEXA antisense RNA 1
HIST3H3 histone cluster 3, H3
HSD3B2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
IFT80 intraflagellar transport 80
IGFALS insulin-like growth factor binding protein, acid labile subunit
IGFL4 IGF-like family member 4
IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
IL17C interleukin 17C
IL17RB interleukin 17 receptor B
JAKMIP3 Janus kinase and microtubule interacting protein 3
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8
KCNIP4-IT1 KCNIP4 intronic transcript 1
KCNQ4 potassium channel, voltage gated KQT-like subfamily Q, member 4
KEL Kell blood group, metallo-endopeptidase
KIAA0355 KIAA0355
KLHL31 kelch-like family member 31
KLK14 kallikrein-related peptidase 14
KLK9 kallikrein-related peptidase 9
KLKB1 kallikrein B, plasma (Fletcher factor) 1
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KRT37 keratin 37, type I
KRT39 keratin 39, type I
KRT81 keratin 81, type II
KRT85 keratin 85, type II
KSR1 kinase suppressor of ras 1
L3MBTL1 l(3)mbt-like 1 (Drosophila)
LCE1A late cornified envelope 1A
LDB3 LIM domain binding 3
LENG8 leukocyte receptor cluster (LRC) member 8
LHCGR luteinizing hormone/choriogonadotropin receptor
LINC00028 long intergenic non-protein coding RNA 28
LINC00032 long intergenic non-protein coding RNA 32
LINC00161 long intergenic non-protein coding RNA 161
LINC00235 long intergenic non-protein coding RNA 235
LINC00264 long intergenic non-protein coding RNA 264
LINC00303 long intergenic non-protein coding RNA 303
LINC00323 long intergenic non-protein coding RNA 323
LINC00471 long intergenic non-protein coding RNA 471
LINC00476 long intergenic non-protein coding RNA 476
LINC00479 long intergenic non-protein coding RNA 479
LINC00482 long intergenic non-protein coding RNA 482
LINC01548 long intergenic non-protein coding RNA 1548
LIPE lipase, hormone-sensitive
LOC100132287 uncharacterized LOC100132287
LOC100133331 uncharacterized LOC100133331
LOC100190986 uncharacterized LOC100190986
LOC100270804 uncharacterized LOC100270804
LOC100272217 uncharacterized LOC100272217
LOC146880 Rho GTPase activating protein 27 pseudogene
LOC284009 uncharacterized LOC284009
LOC285593 uncharacterized LOC285593
LOC391322 D-dopachrome tautomerase-like
LOC613037 nuclear pore complex interacting protein pseudogene
LOC646471 uncharacterized LOC646471
LOC728024 chromosome X open reading frame 56 pseudogene
LOC93432
LRRC30 leucine rich repeat containing 30
LY6G5B lymphocyte antigen 6 complex, locus G5B
MACF1 microtubule-actin crosslinking factor 1
MAGEA5 melanoma antigen family A5
MAN2A2 mannosidase, alpha, class 2A, member 2
MASP2 mannan-binding lectin serine peptidase 2
MAU2 MAU2 sister chromatid cohesion factor
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MCTS1 malignant T cell amplified sequence 1
MDN1 MDN1, midasin homolog (yeast)
MORN1 MORN repeat containing 1
MOS v-mos Moloney murine sarcoma viral oncogene homolog
MRGPRD MAS-related GPR, member D
MROH7 maestro heat-like repeat family member 7
MST1R macrophage stimulating 1 receptor
MSTO2P misato family member 2, pseudogene
MTCP1 mature T-cell proliferation 1
MTRF1 mitochondrial translational release factor 1
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MTUS1 microtubule associated tumor suppressor 1
MYH3 myosin, heavy chain 3, skeletal muscle, embryonic
MYO15B myosin XVB
MYO18A myosin XVIIIA
MZF1 myeloid zinc finger 1
NAIP NLR family, apoptosis inhibitory protein
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NBPF1 neuroblastoma breakpoint family, member 1
NBPF10 neuroblastoma breakpoint family, member 10
NDRG1 N-myc downstream regulated 1
NDST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
NEB nebulin
NEK3 NIMA-related kinase 3
NKTR natural killer cell triggering receptor
NPY neuropeptide Y
NR0B2 nuclear receptor subfamily 0, group B, member 2
NRIP2 nuclear receptor interacting protein 2
NUDT9P1 nudix (nucleoside diphosphate linked moiety X)-type motif 9 pseudogene 1
OCM2 oncomodulin 2
ODF3 outer dense fiber of sperm tails 3
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR1F2P olfactory receptor, family 1, subfamily F, member 2, pseudogene
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR3A1 olfactory receptor, family 3, subfamily A, member 1
OR52L1 olfactory receptor, family 52, subfamily L, member 1
OR5AK2 olfactory receptor, family 5, subfamily AK, member 2
OR6B1 olfactory receptor, family 6, subfamily B, member 1
OSBPL7 oxysterol binding protein-like 7
OVCH2 ovochymase 2 (gene/pseudogene)
PAIP2B poly(A) binding protein interacting protein 2B
PCDHB6 protocadherin beta 6
PCDHGB7 protocadherin gamma subfamily B, 7
PCSK6 proprotein convertase subtilisin/kexin type 6
PDC phosducin
PDCD6IP programmed cell death 6 interacting protein
PDE6B phosphodiesterase 6B, cGMP-specific, rod, beta
PDE8A phosphodiesterase 8A
PDXDC2P pyridoxal-dependent decarboxylase domain containing 2, pseudogene
PDZD3 PDZ domain containing 3
PFN1P2 profilin 1 pseudogene 2
PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
PLEKHM1P pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene
PLXNB1 plexin B1
PNPLA7 patatin-like phospholipase domain containing 7
POLN polymerase (DNA directed) nu
POM121L1P POM121 transmembrane nucleoporin-like 1, pseudogene
POM121L8P POM121 transmembrane nucleoporin-like 8 pseudogene
POM121L9P POM121 transmembrane nucleoporin-like 9, pseudogene
PRG1 p53-responsive gene 1
PRH2 proline-rich protein HaeIII subfamily 2
PROM2 prominin 2
PRORSD1P prolyl-tRNA synthetase associated domain containing 1, pseudogene
PRR18 proline rich 18
PRSS37 protease, serine, 37
PRTG protogenin
PTK6 protein tyrosine kinase 6
RAD52 RAD52 homolog (S. cerevisiae)
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated)
RBM33 RNA binding motif protein 33
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
RGPD5 RANBP2-like and GRIP domain containing 5
RGSL1 regulator of G-protein signaling like 1
RNF151 ring finger protein 151
RNF222 ring finger protein 222
RNPC3 RNA-binding region (RNP1, RRM) containing 3
RNU6ATAC RNA, U6atac small nuclear (U12-dependent splicing)
RPL13AP6 ribosomal protein L13a pseudogene 6
RPL23AP64 ribosomal protein L23a pseudogene 64
RPS10P7 ribosomal protein S10 pseudogene 7
RPS15AP10 ribosomal protein S15a pseudogene 10
RUNX1-IT1 RUNX1 intronic transcript 1
RYR1 ryanodine receptor 1 (skeletal)
S1PR5 sphingosine-1-phosphate receptor 5
SAXO2 stabilizer of axonemal microtubules 2
SCGB2B2 secretoglobin, family 2B, member 2
SEC14L5 SEC14-like 5 (S. cerevisiae)
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SEMA4C sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
SEPT7P9 septin 7 pseudogene 9
SERINC4 serine incorporator 4
SERPINA12 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
SF3B1 splicing factor 3b, subunit 1, 155kDa
SH3TC2 SH3 domain and tetratricopeptide repeats 2
SLC22A1 solute carrier family 22 (organic cation transporter), member 1
SLC22A13 solute carrier family 22 (organic anion/urate transporter), member 13
SLC22A14 solute carrier family 22, member 14
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC25A34 solute carrier family 25, member 34
SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9
SLC7A5P2 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2
SLC7A9 solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
SLCO1C1 solute carrier organic anion transporter family, member 1C1
SMAD7 SMAD family member 7
SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa
SNHG4 small nucleolar RNA host gene 4
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA19 small nucleolar RNA, H/ACA box 19
SNORA41 small nucleolar RNA, H/ACA box 41
SNORA51 small nucleolar RNA, H/ACA box 51
SNORA56 small nucleolar RNA, H/ACA box 56
SNORA68 small nucleolar RNA, H/ACA box 68
SNORA71B small nucleolar RNA, H/ACA box 71B
SNORD67 small nucleolar RNA, C/D box 67
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1)
SNX20 sorting nexin 20
SPATA21 spermatogenesis associated 21
SPDYE8P speedy/RINGO cell cycle regulator family member E8, pseudogene
SRPK3 SRSF protein kinase 3
SRRM1 serine/arginine repetitive matrix 1
SRSF5 serine/arginine-rich splicing factor 5
STAG3L1 stromal antigen 3-like 1 (pseudogene)
STH saitohin
STKLD1 serine/threonine kinase-like domain containing 1
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
SUN2 Sad1 and UNC84 domain containing 2
SWT1 SWT1 RNA endoribonuclease homolog (S. cerevisiae)
TAAR2 trace amine associated receptor 2
TAAR6 trace amine associated receptor 6
TARSL2 threonyl-tRNA synthetase-like 2
TAS2R10 taste receptor, type 2, member 10
TAS2R14 taste receptor, type 2, member 14
TAS2R19 taste receptor, type 2, member 19
TAS2R30 taste receptor, type 2, member 30
TAS2R41 taste receptor, type 2, member 41
TAS2R5 taste receptor, type 2, member 5
TBC1D12 TBC1 domain family, member 12
TBC1D13 TBC1 domain family, member 13
TBC1D2 TBC1 domain family, member 2
TBC1D26 TBC1 domain family, member 26
TBC1D29 TBC1 domain family, member 29
TBC1D3 TBC1 domain family, member 3
TBC1D3H TBC1 domain family, member 3H
TJAP1 tight junction associated protein 1 (peripheral)
TLR9 toll-like receptor 9
TMC6 transmembrane channel-like 6
TMEM105 transmembrane protein 105
TMEM125 transmembrane protein 125
TMEM213 transmembrane protein 213
TMEM63A transmembrane protein 63A
TMEM88B transmembrane protein 88B
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TNNI3K TNNI3 interacting kinase
TRAF1 TNF receptor-associated factor 1
TRIM45 tripartite motif containing 45
TRIM52 tripartite motif containing 52
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TRPV3 transient receptor potential cation channel, subfamily V, member 3
TRPV5 transient receptor potential cation channel, subfamily V, member 5
TSC1 tuberous sclerosis 1
TSNARE1 t-SNARE domain containing 1
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate)
TSPY1 testis specific protein, Y-linked 1
TSPYL5 TSPY-like 5
TSSK6 testis-specific serine kinase 6
TTLL11 tubulin tyrosine ligase-like family member 11
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
TTYH2 tweety family member 2
TUBGCP6 tubulin, gamma complex associated protein 6
TYK2 tyrosine kinase 2
UROC1 urocanate hydratase 1
USP20 ubiquitin specific peptidase 20
USP48 ubiquitin specific peptidase 48
UTF1 undifferentiated embryonic cell transcription factor 1
UTS2 urotensin 2
VN1R1 vomeronasal 1 receptor 1
VN1R2 vomeronasal 1 receptor 2
WDR27 WD repeat domain 27
WDR59 WD repeat domain 59
WNK2 WNK lysine deficient protein kinase 2
WSB1 WD repeat and SOCS box containing 1
YJEFN3 YjeF N-terminal domain containing 3
ZFAT-AS1 ZFAT antisense RNA 1
ZMYM1 zinc finger, MYM-type 1
ZMYM6 zinc finger, MYM-type 6
ZNF135 zinc finger protein 135
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF211 zinc finger protein 211
ZNF224 zinc finger protein 224
ZNF251 zinc finger protein 251
ZNF252P-AS1 ZNF252P antisense RNA 1
ZNF266 zinc finger protein 266
ZNF274 zinc finger protein 274
ZNF284 zinc finger protein 284
ZNF333 zinc finger protein 333
ZNF383 zinc finger protein 383
ZNF404 zinc finger protein 404
ZNF433 zinc finger protein 433
ZNF44 zinc finger protein 44
ZNF441 zinc finger protein 441
ZNF471 zinc finger protein 471
ZNF491 zinc finger protein 491
ZNF493 zinc finger protein 493
ZNF518A zinc finger protein 518A
ZNF559 zinc finger protein 559
ZNF565 zinc finger protein 565
ZNF587 zinc finger protein 587
ZNF625 zinc finger protein 625
ZNF627 zinc finger protein 627
ZNF703 zinc finger protein 703
ZNF774 zinc finger protein 774
ZNF780B zinc finger protein 780B
ZNF846 zinc finger protein 846
ZSCAN18 zinc finger and SCAN domain containing 18
ZSWIM8 zinc finger, SWIM-type containing 8

low expression

Symbol Name
ASB8 ankyrin repeat and SOCS box containing 8
BRAP BRCA1 associated protein
C12ORF65 chromosome 12 open reading frame 65
COPZ1 coatomer protein complex, subunit zeta 1
DENR density-regulated protein
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5
METAP2 methionyl aminopeptidase 2
METTL15 methyltransferase like 15
MMADHC methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
MTCH2 mitochondrial carrier 2
PHF23 PHD finger protein 23
PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit
PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1
PWP1 PWP1 homolog (S. cerevisiae)
RNF34 ring finger protein 34, E3 ubiquitin protein ligase
UBE2N ubiquitin-conjugating enzyme E2N
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae)