Brain Lower Grade Glioma_LGG_TCGA-TM-A84S-01A-11R-A36H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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280 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TM-A84S-01A-11R-A36H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ABCC11 ATP-binding cassette, sub-family C (CFTR/MRP), member 11
ACBD7 acyl-CoA binding domain containing 7
ACOT1 acyl-CoA thioesterase 1
ACOT2 acyl-CoA thioesterase 2
ADAM21 ADAM metallopeptidase domain 21
ADAM5 ADAM metallopeptidase domain 5 (pseudogene)
AIG1 androgen-induced 1
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
ALPL alkaline phosphatase, liver/bone/kidney
ANGPTL1 angiopoietin-like 1
ANOS1 anosmin 1
AP3S2 adaptor-related protein complex 3, sigma 2 subunit
APCDD1 adenomatosis polyposis coli down-regulated 1
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
ARRB1 arrestin, beta 1
ASAP1-IT1 ASAP1 intronic transcript 1
AWAT1 acyl-CoA wax alcohol acyltransferase 1
AXIN2 axin 2
BAG2 BCL2-associated athanogene 2
BARHL1 BarH-like homeobox 1
BARX2 BARX homeobox 2
BLM Bloom syndrome, RecQ helicase-like
BPESC1 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
BSPRY B-box and SPRY domain containing
BTNL2 butyrophilin-like 2
C11ORF71 chromosome 11 open reading frame 71
C15ORF59 chromosome 15 open reading frame 59
C16ORF90 chromosome 16 open reading frame 90
C17ORF100 chromosome 17 open reading frame 100
C17ORF47 chromosome 17 open reading frame 47
C17ORF78 chromosome 17 open reading frame 78
C1ORF185 chromosome 1 open reading frame 185
C1ORF229 chromosome 1 open reading frame 229
C20ORF144 chromosome 20 open reading frame 144
C22ORF46 chromosome 22 open reading frame 46
C2ORF74 chromosome 2 open reading frame 74
C2ORF82 chromosome 2 open reading frame 82
C3ORF30 chromosome 3 open reading frame 30
C5ORF47 chromosome 5 open reading frame 47
C9ORF57 chromosome 9 open reading frame 57
CALN1 calneuron 1
CCDC53 coiled-coil domain containing 53
CCDC73 coiled-coil domain containing 73
CCDC80 coiled-coil domain containing 80
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2)
CD200R1L CD200 receptor 1-like
CD300LG CD300 molecule-like family member g
CDC42EP4 CDC42 effector protein (Rho GTPase binding) 4
CDR1 cerebellar degeneration-related protein 1, 34kDa
CENPV centromere protein V
CHST1 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
CIDEC cell death-inducing DFFA-like effector c
CMBL carboxymethylenebutenolidase homolog (Pseudomonas)
CNRIP1 cannabinoid receptor interacting protein 1
CNTD1 cyclin N-terminal domain containing 1
COA5 cytochrome c oxidase assembly factor 5
COQ3 coenzyme Q3 methyltransferase
CRLF1 cytokine receptor-like factor 1
CST9 cystatin 9 (testatin)
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1
DAAM2 dishevelled associated activator of morphogenesis 2
DAGLA diacylglycerol lipase, alpha
DAND5 DAN domain family member 5, BMP antagonist
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)
DBX2 developing brain homeobox 2
DGCR6 DiGeorge syndrome critical region gene 6
DIRC2 disrupted in renal carcinoma 2
DKFZP779M0652 uncharacterized DKFZp779M0652
DNAH7 dynein, axonemal, heavy chain 7
EFCAB11 EF-hand calcium binding domain 11
EFHB EF-hand domain family, member B
EGLN3 egl-9 family hypoxia-inducible factor 3
ENKUR enkurin, TRPC channel interacting protein
ERC2-IT1 ERC2 intronic transcript 1
ERO1LB ERO1-like beta (S. cerevisiae)
ETNPPL ethanolamine-phosphate phospho-lyase
EXPH5 exophilin 5
FADS1 fatty acid desaturase 1
FAM181B family with sequence similarity 181, member B
FAM189A2 family with sequence similarity 189, member A2
FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
FAM218A family with sequence similarity 218, member A
FAM225A family with sequence similarity 225, member A (non-protein coding)
FAM46D family with sequence similarity 46, member D
FAM69C family with sequence similarity 69, member C
FAM90A1 family with sequence similarity 90, member A1
FAT3 FAT atypical cadherin 3
FBXL22 F-box and leucine-rich repeat protein 22
FHDC1 FH2 domain containing 1
FLJ16779 uncharacterized LOC100192386
FLJ42393 uncharacterized LOC401105
FMO2 flavin containing monooxygenase 2 (non-functional)
FMO6P flavin containing monooxygenase 6 pseudogene
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1
GALNT16 polypeptide N-acetylgalactosaminyltransferase 16
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GDF1 growth differentiation factor 1
GHSR growth hormone secretagogue receptor
GINS3 GINS complex subunit 3 (Psf3 homolog)
GKAP1 G kinase anchoring protein 1
GLG1 golgi glycoprotein 1
GNPDA2 glucosamine-6-phosphate deaminase 2
GOLGA8EP golgin A8 family, member E, pseudogene
GPKOW G patch domain and KOW motifs
GPR19 G protein-coupled receptor 19
GPR89B G protein-coupled receptor 89B
GPRC5B G protein-coupled receptor, class C, group 5, member B
GRAMD1C GRAM domain containing 1C
GRIK1-AS1 GRIK1 antisense RNA 1
GRINA glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
GRXCR1 glutaredoxin, cysteine rich 1
HEY1 hes-related family bHLH transcription factor with YRPW motif 1
HHLA2 HERV-H LTR-associating 2
HIST1H1E histone cluster 1, H1e
HIST1H2BB histone cluster 1, H2bb
HIST1H4E histone cluster 1, H4e
HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1
HMHB1 histocompatibility (minor) HB-1
HNMT histamine N-methyltransferase
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HSPB2 heat shock 27kDa protein 2
HSPB9 heat shock protein, alpha-crystallin-related, B9
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IDNK idnK, gluconokinase homolog (E. coli)
IFITM5 interferon induced transmembrane protein 5
IFNW1 interferon, omega 1
IL12A interleukin 12A
IL17RD interleukin 17 receptor D
IL31 interleukin 31
IL4 interleukin 4
INGX inhibitor of growth family, X-linked, pseudogene
INPP1 inositol polyphosphate-1-phosphatase
IQCA1 IQ motif containing with AAA domain 1
IQCK IQ motif containing K
IRX3 iroquois homeobox 3
ISX intestine-specific homeobox
ITPK1-AS1 ITPK1 antisense RNA 1
JSRP1 junctional sarcoplasmic reticulum protein 1
KCNMB1 potassium channel subfamily M regulatory beta subunit 1
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KCNU1 potassium channel, subfamily U, member 1
KCTD21 potassium channel tetramerization domain containing 21
KIF6 kinesin family member 6
KLHL25 kelch-like family member 25
LAMA1 laminin, alpha 1
LAMP5 lysosomal-associated membrane protein family, member 5
LCAT lecithin-cholesterol acyltransferase
LINC00032 long intergenic non-protein coding RNA 32
LINC00652 long intergenic non-protein coding RNA 652
LINC01548 long intergenic non-protein coding RNA 1548
LIX1 Lix1 homolog (chicken)
LOC100268168 uncharacterized LOC100268168
LOC145474 uncharacterized LOC145474
LOC283856 uncharacterized LOC283856
LOC285627 uncharacterized LOC285627
LOC389705 chromosome 4 open reading frame 27 pseudogene
LOC642929 general transcription factor II, i pseudogene
LRRC37A leucine rich repeat containing 37A
MAP3K5 mitogen-activated protein kinase kinase kinase 5
MED7 mediator complex subunit 7
MGC15885 uncharacterized protein MGC15885
MGC16275 uncharacterized protein MGC16275
MINPP1 multiple inositol-polyphosphate phosphatase 1
MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1
MT1IP metallothionein 1I, pseudogene
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
MYH15 myosin, heavy chain 15
MYOD1 myogenic differentiation 1
MYOM1 myomesin 1
NAP1L6 nucleosome assembly protein 1-like 6
NTSR2 neurotensin receptor 2
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13
OR10AD1 olfactory receptor, family 10, subfamily AD, member 1
OR10H3 olfactory receptor, family 10, subfamily H, member 3
OR2AE1 olfactory receptor, family 2, subfamily AE, member 1
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR4M1 olfactory receptor, family 4, subfamily M, member 1
OR52B6 olfactory receptor, family 52, subfamily B, member 6
OR52D1 olfactory receptor, family 52, subfamily D, member 1
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OR6V1 olfactory receptor, family 6, subfamily V, member 1
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
OXT oxytocin/neurophysin I prepropeptide
PCDHA6 protocadherin alpha 6
PCDHB16 protocadherin beta 16
PCDHGA1 protocadherin gamma subfamily A, 1
PCDHGA9 protocadherin gamma subfamily A, 9
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial)
PDHA2 pyruvate dehydrogenase (lipoamide) alpha 2
PEA15 phosphoprotein enriched in astrocytes 15
PIRT phosphoinositide-interacting regulator of transient receptor potential channels
PITX3 paired-like homeodomain 3
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein
PLXNA4 plexin A4
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
PON1 paraoxonase 1
PON2 paraoxonase 2
PON3 paraoxonase 3
PPIAL4E peptidylprolyl isomerase A (cyclophilin A)-like 4E
PRB3 proline-rich protein BstNI subfamily 3
PSAPL1 prosaposin-like 1 (gene/pseudogene)
PTGR2 prostaglandin reductase 2
PURG purine-rich element binding protein G
RAB41 RAB41, member RAS oncogene family
RASL10A RAS-like, family 10, member A
REP15 RAB15 effector protein
RETSAT retinol saturase (all-trans-retinol 13,14-reductase)
RGMA repulsive guidance molecule family member a
RGR retinal G protein coupled receptor
RHBDL3 rhomboid, veinlet-like 3 (Drosophila)
RPS26 ribosomal protein S26
RRH retinal pigment epithelium-derived rhodopsin homolog
SAMD7 sterile alpha motif domain containing 7
SCAND2P SCAN domain containing 2 pseudogene
SCARNA1 small Cajal body-specific RNA 1
SCARNA17 small Cajal body-specific RNA 17
SCARNA9 small Cajal body-specific RNA 9
SCN9A sodium channel, voltage gated, type IX alpha subunit
SELL selectin L
SFRP2 secreted frizzled-related protein 2
SH2B2 SH2B adaptor protein 2
SH2D6 SH2 domain containing 6
SIGLECL1 SIGLEC family like 1
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC38A1 solute carrier family 38, member 1
SLC51B solute carrier family 51, beta subunit
SLURP1 secreted LY6/PLAUR domain containing 1
SMCP sperm mitochondria-associated cysteine-rich protein
SMG6 SMG6 nonsense mediated mRNA decay factor
SMIM19 small integral membrane protein 19
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA25 small nucleolar RNA, H/ACA box 25
SNORA36B small nucleolar RNA, H/ACA box 36B
SNORA4 small nucleolar RNA, H/ACA box 4
SNORA47 small nucleolar RNA, H/ACA box 47
SNORA68 small nucleolar RNA, H/ACA box 68
SNORA71A small nucleolar RNA, H/ACA box 71A
SNORA76A small nucleolar RNA, H/ACA box 76A
SNORD15A small nucleolar RNA, C/D box 15A
SNX18 sorting nexin 18
SPAG16 sperm associated antigen 16
SPATA16 spermatogenesis associated 16
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SSMEM1 serine-rich single-pass membrane protein 1
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STH saitohin
STX19 syntaxin 19
SUGT1P1 SUGT1 pseudogene 1
TAS2R13 taste receptor, type 2, member 13
TCEAL8 transcription elongation factor A (SII)-like 8
TERC telomerase RNA component
TEX36 testis expressed 36
TMEM14E transmembrane protein 14E
TMEM257 transmembrane protein 257
TOMM20L translocase of outer mitochondrial membrane 20 homolog (yeast)-like
TOPAZ1 testis and ovary specific PAZ domain containing 1
TPRKB TP53RK binding protein
TRAF3IP2 TRAF3 interacting protein 2
TRIM8 tripartite motif containing 8
TSPY1 testis specific protein, Y-linked 1
TTPA tocopherol (alpha) transfer protein
TYW1B tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)
ULK4P2 ULK4 pseudogene 2
USH1C Usher syndrome 1C (autosomal recessive, severe)
VCX2 variable charge, X-linked 2
VEPH1 ventricular zone expressed PH domain-containing 1
WBP5 WW domain binding protein 5
WWC1 WW and C2 domain containing 1
XKR3 XK, Kell blood group complex subunit-related family, member 3
ZBTB20 zinc finger and BTB domain containing 20
ZNF385A zinc finger protein 385A
ZNF625 zinc finger protein 625
ZNF823 zinc finger protein 823
ZNF833P zinc finger protein 833, pseudogene

low expression

Symbol Name
ACSF3 acyl-CoA synthetase family member 3
PCID2 PCI domain containing 2