Brain Lower Grade Glioma_LGG_TCGA-TM-A84Q-01A-11R-A36H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

204 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TM-A84Q-01A-11R-A36H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACSM6 acyl-CoA synthetase medium-chain family member 6
ACTL9 actin-like 9
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
ANGPTL3 angiopoietin-like 3
ANGPTL6 angiopoietin-like 6
ANXA9 annexin A9
AP1G1 adaptor-related protein complex 1, gamma 1 subunit
APC2 adenomatosis polyposis coli 2
ARL2BP ADP-ribosylation factor-like 2 binding protein
ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
ASB17 ankyrin repeat and SOCS box containing 17
ASIP agouti signaling protein
ATAD2B ATPase family, AAA domain containing 2B
B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
BBS2 Bardet-Biedl syndrome 2
BCAR1 breast cancer anti-estrogen resistance 1
BCAR4 breast cancer anti-estrogen resistance 4 (non-protein coding)
BLOC1S5 biogenesis of lysosomal organelles complex-1, subunit 5, muted
BMPR1A bone morphogenetic protein receptor, type IA
BRD7 bromodomain containing 7
BTG1 B-cell translocation gene 1, anti-proliferative
C11ORF40 chromosome 11 open reading frame 40
C16ORF87 chromosome 16 open reading frame 87
C1ORF146 chromosome 1 open reading frame 146
C1QL1 complement component 1, q subcomponent-like 1
C4ORF36 chromosome 4 open reading frame 36
C7ORF61 chromosome 7 open reading frame 61
CCBL2 cysteine conjugate-beta lyase 2
CCDC102A coiled-coil domain containing 102A
CCDC103 coiled-coil domain containing 103
CCDC43 coiled-coil domain containing 43
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast)
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma
CELA1 chymotrypsin-like elastase family, member 1
CFAP20 cilia and flagella associated protein 20
CFDP1 craniofacial development protein 1
CIAPIN1 cytokine induced apoptosis inhibitor 1
CIRBP cold inducible RNA binding protein
CITED1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1
CLEC18C C-type lectin domain family 18, member C
CMTR2 cap methyltransferase 2
CNN2 calponin 2
CNN3 calponin 3, acidic
COG4 component of oligomeric golgi complex 4
COG8 component of oligomeric golgi complex 8
COMMD2 COMM domain containing 2
COQ10A coenzyme Q10 homolog A (S. cerevisiae)
CPNE2 copine II
CRYAB crystallin, alpha B
CSNK2A2 casein kinase 2, alpha prime polypeptide
CTNND2 catenin (cadherin-associated protein), delta 2
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
DHRS1 dehydrogenase/reductase (SDR family) member 1
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38
DKFZP434K028 uncharacterized LOC26070
DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9
DPPA3 developmental pluripotency associated 3
DSPP dentin sialophosphoprotein
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2
EDC4 enhancer of mRNA decapping 4
EDNRA endothelin receptor type A
EFNA2 ephrin-A2
ELL2 elongation factor, RNA polymerase II, 2
ENAH enabled homolog (Drosophila)
EVPLL envoplakin-like
EXOSC6 exosome component 6
FAM65A family with sequence similarity 65, member A
FBXO11 F-box protein 11
FGF20 fibroblast growth factor 20
FSTL3 follistatin-like 3 (secreted glycoprotein)
GABARAPL2 GABA(A) receptor-associated protein-like 2
GAS5 growth arrest-specific 5 (non-protein coding)
GDAP2 ganglioside induced differentiation associated protein 2
GORAB golgin, RAB6-interacting
GPN1 GPN-loop GTPase 1
GPR182 G protein-coupled receptor 182
GPR65 G protein-coupled receptor 65
GRHL3 grainyhead-like 3 (Drosophila)
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
GTPBP2 GTP binding protein 2
GUSBP3 glucuronidase, beta pseudogene 3
HEATR3 HEAT repeat containing 3
HEXIM1 hexamethylene bis-acetamide inducible 1
HRK harakiri, BCL2 interacting protein
HSBP1 heat shock factor binding protein 1
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
IPO9 importin 9
JAKMIP2 janus kinase and microtubule interacting protein 2
KARS lysyl-tRNA synthetase
KATNB1 katanin p80 (WD repeat containing) subunit B 1
KCNT2 potassium channel, sodium activated subfamily T, member 2
LAPTM4A lysosomal protein transmembrane 4 alpha
LDLRAD3 low density lipoprotein receptor class A domain containing 3
LGTN ligatin
LINC00051 long intergenic non-protein coding RNA 51
LOC100272216 uncharacterized LOC100272216
LOC728024 chromosome X open reading frame 56 pseudogene
LPAR6 lysophosphatidic acid receptor 6
LRRN4 leucine rich repeat neuronal 4
MBTPS1 membrane-bound transcription factor peptidase, site 1
MEMO1 mediator of cell motility 1
METTL12 methyltransferase like 12
MEX3D mex-3 RNA binding family member D
MIDN midnolin
MLNR motilin receptor
MMP27 matrix metallopeptidase 27
MPHOSPH6 M-phase phosphoprotein 6
MSRA methionine sulfoxide reductase A
MUM1 melanoma associated antigen (mutated) 1
N4BP1 NEDD4 binding protein 1
NAE1 NEDD8 activating enzyme E1 subunit 1
NAV2 neuron navigator 2
NDUFAF7 NADH dehydrogenase (ubiquinone) complex I, assembly factor 7
NELFCD negative elongation factor complex member C/D
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive
NIP7 NIP7, nucleolar pre-rRNA processing protein
NPHP3-AS1 NPHP3 antisense RNA 1
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OR4D1 olfactory receptor, family 4, subfamily D, member 1
OR4N2 olfactory receptor, family 4, subfamily N, member 2
OR51B4 olfactory receptor, family 51, subfamily B, member 4
OR52D1 olfactory receptor, family 52, subfamily D, member 1
OR5K2 olfactory receptor, family 5, subfamily K, member 2
OR6A2 olfactory receptor, family 6, subfamily A, member 2
OR7D2 olfactory receptor, family 7, subfamily D, member 2
PCDH15 protocadherin-related 15
PCDHA8 protocadherin alpha 8
PCDHB17P protocadherin beta 17 pseudogene
PCDHB18P protocadherin beta 18 pseudogene
PCDHB19P protocadherin beta 19 pseudogene
PCMTD2 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
PCNAP1 proliferating cell nuclear antigen pseudogene 1
PDZRN3 PDZ domain containing ring finger 3
PELI1 pellino E3 ubiquitin protein ligase 1
PLIN3 perilipin 3
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
PPP1R27 protein phosphatase 1, regulatory subunit 27
PRORSD1P prolyl-tRNA synthetase associated domain containing 1, pseudogene
PRRX1 paired related homeobox 1
PXYLP1 2-phosphoxylose phosphatase 1
RAB2B RAB2B, member RAS oncogene family
RANBP10 RAN binding protein 10
RBL2 retinoblastoma-like 2
RFX6 regulatory factor X, 6
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
RNASE3 ribonuclease, RNase A family, 3
RNF126P1 ring finger protein 126 pseudogene 1
RSPRY1 ring finger and SPRY domain containing 1
SCAMP4 secretory carrier membrane protein 4
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2
SETD6 SET domain containing 6
SF3B3 splicing factor 3b, subunit 3, 130kDa
SIAH1 siah E3 ubiquitin protein ligase 1
SLC10A6 solute carrier family 10 (sodium/bile acid cotransporter), member 6
SLC4A1AP solute carrier family 4 (anion exchanger), member 1, adaptor protein
SLC7A6OS solute carrier family 7, member 6 opposite strand
SLC9A5 solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA45B small nucleolar RNA, H/ACA box 45B
SNORA5B small nucleolar RNA, H/ACA box 5B
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2
STK11 serine/threonine kinase 11
SUPT7L suppressor of Ty 7 (S. cerevisiae)-like
TAS2R7 taste receptor, type 2, member 7
TCF3 transcription factor 3
TCL1B T-cell leukemia/lymphoma 1B
TEKT5 tektin 5
TERF2IP telomeric repeat binding factor 2, interacting protein
THAP11 THAP domain containing 11
TLDC1 TBC/LysM-associated domain containing 1
TMED6 transmembrane emp24 protein transport domain containing 6
TPST1 tyrosylprotein sulfotransferase 1
TRADD TNFRSF1A-associated via death domain
TRIM10 tripartite motif containing 10
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28
USB1 U6 snRNA biogenesis 1
USP10 ubiquitin specific peptidase 10
UTS2 urotensin 2
VN1R10P vomeronasal 1 receptor 10 pseudogene
WDR18 WD repeat domain 18
WDR59 WD repeat domain 59
WNT2 wingless-type MMTV integration site family member 2
YTHDF1 YTH N(6)-methyladenosine RNA binding protein 1
ZDHHC7 zinc finger, DHHC-type containing 7
ZFP90 ZFP90 zinc finger protein
ZNF19 zinc finger protein 19
ZNF319 zinc finger protein 319
ZNF345 zinc finger protein 345
ZNF560 zinc finger protein 560
ZNF785 zinc finger protein 785

low expression

Symbol Name
ANKRD11 ankyrin repeat domain 11
DEF8 differentially expressed in FDCP 8 homolog (mouse)
EMC8 ER membrane protein complex subunit 8
SPG7 spastic paraplegia 7 (pure and complicated autosomal recessive)
TCEANC transcription elongation factor A (SII) N-terminal and central domain containing
TCF25 transcription factor 25 (basic helix-loop-helix)
WWC3 WWC family member 3
ZC3H18 zinc finger CCCH-type containing 18