Brain Lower Grade Glioma_LGG_TCGA-S9-A7QY-01A-11R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

289 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A7QY-01A-11R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AATK apoptosis-associated tyrosine kinase
ABCA2 ATP-binding cassette, sub-family A (ABC1), member 2
ABCB8 ATP-binding cassette, sub-family B (MDR/TAP), member 8
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ACTL7A actin-like 7A
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6
AIFM2 apoptosis-inducing factor, mitochondrion-associated, 2
ALDH8A1 aldehyde dehydrogenase 8 family, member A1
AMT aminomethyltransferase
ANKRD23 ankyrin repeat domain 23
ANO8 anoctamin 8
ARGFX arginine-fifty homeobox
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
ASIC3 acid sensing (proton gated) ion channel 3
ASMTL-AS1 ASMTL antisense RNA 1
B4GALNT4 beta-1,4-N-acetyl-galactosaminyl transferase 4
BARX2 BARX homeobox 2
BIRC7 baculoviral IAP repeat containing 7
BPESC1 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
BPIFB2 BPI fold containing family B, member 2
BRSK2 BR serine/threonine kinase 2
C10ORF131 chromosome 10 open reading frame 131
C11ORF16 chromosome 11 open reading frame 16
C12ORF50 chromosome 12 open reading frame 50
C12ORF71 chromosome 12 open reading frame 71
C17ORF99 chromosome 17 open reading frame 99
C19ORF71 chromosome 19 open reading frame 71
C1ORF168 chromosome 1 open reading frame 168
C7ORF34 chromosome 7 open reading frame 34
C9ORF139 chromosome 9 open reading frame 139
C9ORF173 chromosome 9 open reading frame 173
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
CAPN11 calpain 11
CARNS1 carnosine synthase 1
CATSPER2 cation channel, sperm associated 2
CATSPER4 cation channel, sperm associated 4
CBWD3 COBW domain containing 3
CBWD6 COBW domain containing 6
CCDC183 coiled-coil domain containing 183
CCDC27 coiled-coil domain containing 27
CCDC54 coiled-coil domain containing 54
CD22 CD22 molecule
CD300LG CD300 molecule-like family member g
CDH24 cadherin 24, type 2
CELF6 CUGBP, Elav-like family member 6
CEP164 centrosomal protein 164kDa
CERCAM cerebral endothelial cell adhesion molecule
CFHR4 complement factor H-related 4
CLEC2A C-type lectin domain family 2, member A
CLEC4F C-type lectin domain family 4, member F
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)
COX7B2 cytochrome c oxidase subunit VIIb2
CPA5 carboxypeptidase A5
CSAD cysteine sulfinic acid decarboxylase
CTRL chymotrypsin-like
CUZD1 CUB and zona pellucida-like domains 1
CYB5R2 cytochrome b5 reductase 2
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6
CYP2D7 cytochrome P450, family 2, subfamily D, polypeptide 7 (gene/pseudogene)
CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
DDX11L2 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 2
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
DEFB109P1 defensin, beta 109, pseudogene 1
DEFB109P1B defensin, beta 109, pseudogene 1B
DEFB118 defensin, beta 118
DFNB31 deafness, autosomal recessive 31
DNAH1 dynein, axonemal, heavy chain 1
DNHD1 dynein heavy chain domain 1
DPPA2 developmental pluripotency associated 2
DPY19L2P4 DPY19L2 pseudogene 4
DUSP13 dual specificity phosphatase 13
EPOR erythropoietin receptor
ESPNP espin pseudogene
ESX1 ESX homeobox 1
FAM160A2 family with sequence similarity 160, member A2
FAM170A family with sequence similarity 170, member A
FAM170B family with sequence similarity 170, member B
FAM181B family with sequence similarity 181, member B
FAM186A family with sequence similarity 186, member A
FAM225A family with sequence similarity 225, member A (non-protein coding)
FAM24B family with sequence similarity 24, member B
FAM27C family with sequence similarity 27, member C
FAM90A1 family with sequence similarity 90, member A1
FBXO24 F-box protein 24
FER1L5 fer-1-like family member 5
FFAR1 free fatty acid receptor 1
FIGLA folliculogenesis specific basic helix-loop-helix
FN3K fructosamine 3 kinase
FSCN2 fascin actin-bundling protein 2, retinal
GHRH growth hormone releasing hormone
GOLGA8B golgin A8 family, member B
GOLGA8DP golgin A8 family, member D, pseudogene
GOLGA8IP golgin A8 family, member I, pseudogene
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
GPX5 glutathione peroxidase 5
GSX1 GS homeobox 1
HAR1B highly accelerated region 1B (non-protein coding)
HCG27 HLA complex group 27 (non-protein coding)
HES6 hes family bHLH transcription factor 6
HGC6.3 uncharacterized LOC100128124
HHATL hedgehog acyltransferase-like
HMBS hydroxymethylbilane synthase
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
HSF4 heat shock transcription factor 4
HULC hepatocellular carcinoma up-regulated long non-coding RNA
IFITM5 interferon induced transmembrane protein 5
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1
IL17C interleukin 17C
IL21R interleukin 21 receptor
IL25 interleukin 25
INE1 inactivation escape 1 (non-protein coding)
INHA inhibin, alpha
INSIG1 insulin induced gene 1
IZUMO4 IZUMO family member 4
JAKMIP3 Janus kinase and microtubule interacting protein 3
JMJD7-PLA2G4B JMJD7-PLA2G4B readthrough
KATNBL1 katanin p80 subunit B-like 1
KCNA10 potassium channel, voltage gated shaker related subfamily A, member 10
KCNG4 potassium channel, voltage gated modifier subfamily G, member 4
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8
KCNK18 potassium channel, two pore domain subfamily K, member 18
KEL Kell blood group, metallo-endopeptidase
KIAA0895L KIAA0895-like
KIF25 kinesin family member 25
KIR3DL1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1
KREMEN2 kringle containing transmembrane protein 2
KRTAP10-12 keratin associated protein 10-12
KRTAP26-1 keratin associated protein 26-1
KRTAP5-10 keratin associated protein 5-10
KRTAP5-7 keratin associated protein 5-7
LCN12 lipocalin 12
LINC00051 long intergenic non-protein coding RNA 51
LINC00161 long intergenic non-protein coding RNA 161
LINC00173 long intergenic non-protein coding RNA 173
LINC00176 long intergenic non-protein coding RNA 176
LINC00593 long intergenic non-protein coding RNA 593
LINC00685 long intergenic non-protein coding RNA 685
LINC00696 long intergenic non-protein coding RNA 696
LMAN1L lectin, mannose-binding, 1 like
LOC100128076 protein tyrosine phosphatase pseudogene
LOC100129935 lectin, galactoside-binding, soluble, 14 pseudogene
LOC100133331 uncharacterized LOC100133331
LOC154449 uncharacterized LOC154449
LOC284788 uncharacterized LOC284788
LOC285593 uncharacterized LOC285593
LOC644172 mitogen-activated protein kinase 8 interacting protein 1 pseudogene
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOC647859 occludin pseudogene
LOC729609 uncharacterized LOC729609
LRRC16B leucine rich repeat containing 16B
LRRC37A leucine rich repeat containing 37A
LRRC74A leucine rich repeat containing 74A
MAMDC4 MAM domain containing 4
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MGC72080 MGC72080 pseudogene
MOGAT3 monoacylglycerol O-acyltransferase 3
MOV10L1 Mov10 RISC complex RNA helicase like 1
MUS81 MUS81 structure-specific endonuclease subunit
MYH6 myosin, heavy chain 6, cardiac muscle, alpha
MYH7 myosin, heavy chain 7, cardiac muscle, beta
MYOD1 myogenic differentiation 1
NF1P1 neurofibromin 1 pseudogene 1
NKX2-8 NK2 homeobox 8
NOX1 NADPH oxidase 1
NOXA1 NADPH oxidase activator 1
NPY neuropeptide Y
NRBP2 nuclear receptor binding protein 2
NTNG2 netrin G2
NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17
NUDT8 nudix (nucleoside diphosphate linked moiety X)-type motif 8
ODF4 outer dense fiber of sperm tails 4
OR10G7 olfactory receptor, family 10, subfamily G, member 7
OR14J1 olfactory receptor, family 14, subfamily J, member 1
OR1K1 olfactory receptor, family 1, subfamily K, member 1
OR2AT4 olfactory receptor, family 2, subfamily AT, member 4
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR51G1 olfactory receptor, family 51, subfamily G, member 1 (gene/pseudogene)
OR51I2 olfactory receptor, family 51, subfamily I, member 2
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OR5B12 olfactory receptor, family 5, subfamily B, member 12
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OR6C2 olfactory receptor, family 6, subfamily C, member 2
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
P2RY8 purinergic receptor P2Y, G-protein coupled, 8
PAAF1 proteasomal ATPase-associated factor 1
PAQR4 progestin and adipoQ receptor family member IV
PATE4 prostate and testis expressed 4
PCDHA12 protocadherin alpha 12
PCDHA8 protocadherin alpha 8
PCDHB6 protocadherin beta 6
PCDHGA10 protocadherin gamma subfamily A, 10
PCSK4 proprotein convertase subtilisin/kexin type 4
PCYT2 phosphate cytidylyltransferase 2, ethanolamine
PDIA2 protein disulfide isomerase family A, member 2
PGLYRP4 peptidoglycan recognition protein 4
PIGL phosphatidylinositol glycan anchor biosynthesis, class L
PILRB paired immunoglobin-like type 2 receptor beta
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
PLXNB3 plexin B3
POU5F1B POU class 5 homeobox 1B
PPP1R3E protein phosphatase 1, regulatory subunit 3E
PPY2P pancreatic polypeptide 2, pseudogene
PRH2 proline-rich protein HaeIII subfamily 2
PRODH2 proline dehydrogenase (oxidase) 2
PROP1 PROP paired-like homeobox 1
PRPF40B PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)
PRR23A proline rich 23A
PRR25 proline rich 25
PSG9 pregnancy specific beta-1-glycoprotein 9
PSTPIP1 proline-serine-threonine phosphatase interacting protein 1
PTK6 protein tyrosine kinase 6
PVRIG poliovirus receptor related immunoglobulin domain containing
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C)
RAPSN receptor-associated protein of the synapse
RASGEF1C RasGEF domain family, member 1C
RBM19 RNA binding motif protein 19
RBP3 retinol binding protein 3, interstitial
RGL3 ral guanine nucleotide dissociation stimulator-like 3
RNF186 ring finger protein 186
RNU4ATAC RNA, U4atac small nuclear (U12-dependent splicing)
RRN3P1 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1
RSPO4 R-spondin 4
RUSC1-AS1 RUSC1 antisense RNA 1
SAMD7 sterile alpha motif domain containing 7
SH2B1 SH2B adaptor protein 1
SLC22A14 solute carrier family 22, member 14
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16
SLC26A5 solute carrier family 26 (anion exchanger), member 5
SLC39A13 solute carrier family 39 (zinc transporter), member 13
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18
SNAR-D small ILF3/NF90-associated RNA D
SNORA11 small nucleolar RNA, H/ACA box 11
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA72 small nucleolar RNA, H/ACA box 72
SNORA9 small nucleolar RNA, H/ACA box 9
SNX15 sorting nexin 15
SPANXB1 SPANX family, member B1
SRI sorcin
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
SRPK3 SRSF protein kinase 3
SRSF5 serine/arginine-rich splicing factor 5
STK31 serine/threonine kinase 31
STRA8 stimulated by retinoic acid 8
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
TAS2R39 taste receptor, type 2, member 39
TAS2R4 taste receptor, type 2, member 4
TAS2R5 taste receptor, type 2, member 5
TBC1D2 TBC1 domain family, member 2
TBC1D29 TBC1 domain family, member 29
TBX10 T-box 10
TDGF1 teratocarcinoma-derived growth factor 1
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TLX1NB TLX1 neighbor
TMCC2 transmembrane and coiled-coil domain family 2
TMEM175 transmembrane protein 175
TMEM257 transmembrane protein 257
TMEM80 transmembrane protein 80
TMEM88B transmembrane protein 88B
TMEM89 transmembrane protein 89
TP73 tumor protein p73
TRIM40 tripartite motif containing 40
TRPC1 transient receptor potential cation channel, subfamily C, member 1
TTLL3 tubulin tyrosine ligase-like family member 3
TTLL8 tubulin tyrosine ligase-like family member 8
TUBGCP6 tubulin, gamma complex associated protein 6
UCN3 urocortin 3
UFSP1 UFM1-specific peptidase 1 (non-functional)
USP50 ubiquitin specific peptidase 50
UVSSA UV-stimulated scaffold protein A
VMAC vimentin-type intermediate filament associated coiled-coil protein
VPS37C vacuolar protein sorting 37 homolog C (S. cerevisiae)
WSB1 WD repeat and SOCS box containing 1
XIST X inactive specific transcript (non-protein coding)
ZDHHC11 zinc finger, DHHC-type containing 11
ZFYVE16 zinc finger, FYVE domain containing 16
ZNF335 zinc finger protein 335
ZNF341 zinc finger protein 341
ZNF767P zinc finger family member 767, pseudogene

low expression

Symbol Name
CCDC120 coiled-coil domain containing 120
COPS4 COP9 signalosome subunit 4
HELQ helicase, POLQ-like
SEC24B SEC24 family member B
UBE2D3 ubiquitin-conjugating enzyme E2D 3
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)