Brain Lower Grade Glioma_LGG_TCGA-S9-A7QW-01A-11R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

426 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A7QW-01A-11R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A1CF APOBEC1 complementation factor
AADAT aminoadipate aminotransferase
AARS alanyl-tRNA synthetase
ABCC11 ATP-binding cassette, sub-family C (CFTR/MRP), member 11
ACAP3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
ACD adrenocortical dysplasia homolog (mouse)
ACPT acid phosphatase, testicular
ACSF3 acyl-CoA synthetase family member 3
ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif, 19
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
AKTIP AKT interacting protein
ALG1L ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like
ANAPC2 anaphase promoting complex subunit 2
ANKRD11 ankyrin repeat domain 11
ANKRD35 ankyrin repeat domain 35
AP2B1 adaptor-related protein complex 2, beta 1 subunit
ARHGAP33 Rho GTPase activating protein 33
ARRDC1-AS1 ARRDC1 antisense RNA 1
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome
ASGR1 asialoglycoprotein receptor 1
ASMTL-AS1 ASMTL antisense RNA 1
ATAT1 alpha tubulin acetyltransferase 1
ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1
ATXN7L2 ataxin 7-like 2
AURKC aurora kinase C
AWAT1 acyl-CoA wax alcohol acyltransferase 1
AXIN1 axin 1
AZU1 azurocidin 1
B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6
BCCIP BRCA2 and CDKN1A interacting protein
BOP1 block of proliferation 1
BRD7 bromodomain containing 7
BTNL2 butyrophilin-like 2
BUB3 BUB3 mitotic checkpoint protein
C10ORF88 chromosome 10 open reading frame 88
C16ORF86 chromosome 16 open reading frame 86
C17ORF100 chromosome 17 open reading frame 100
C17ORF78 chromosome 17 open reading frame 78
C1ORF146 chromosome 1 open reading frame 146
C2ORF57 chromosome 2 open reading frame 57
C7ORF55 chromosome 7 open reading frame 55
C8ORF33 chromosome 8 open reading frame 33
C8ORF59 chromosome 8 open reading frame 59
C9ORF114 chromosome 9 open reading frame 114
C9ORF69 chromosome 9 open reading frame 69
C9ORF78 chromosome 9 open reading frame 78
CACFD1 calcium channel flower domain containing 1
CBWD2 COBW domain containing 2
CCT8L2 chaperonin containing TCP1, subunit 8 (theta)-like 2
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK10 cyclin-dependent kinase 10
CDK16 cyclin-dependent kinase 16
CDK9 cyclin-dependent kinase 9
CENPT centromere protein T
CENPV centromere protein V
CFDP1 craniofacial development protein 1
CHKB choline kinase beta
CHMP1A charged multivesicular body protein 1A
CIAPIN1 cytokine induced apoptosis inhibitor 1
CIRH1A cirrhosis, autosomal recessive 1A (cirhin)
CIZ1 CDKN1A interacting zinc finger protein 1
CLIP2 CAP-GLY domain containing linker protein 2
CNKSR1 connector enhancer of kinase suppressor of Ras 1
COG4 component of oligomeric golgi complex 4
COL22A1 collagen, type XXII, alpha 1
COPG2 coatomer protein complex, subunit gamma 2
COPS6 COP9 signalosome subunit 6
COQ4 coenzyme Q4
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
CPSF3L cleavage and polyadenylation specific factor 3-like
CRAT carnitine O-acetyltransferase
CT47B1 cancer/testis antigen family 47, member B1
CTBP2 C-terminal binding protein 2
CTCF CCCTC-binding factor (zinc finger protein)
CTPS2 CTP synthase 2
CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe)
CYP4A22 cytochrome P450, family 4, subfamily A, polypeptide 22
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
DEFB109P1 defensin, beta 109, pseudogene 1
DHODH dihydroorotate dehydrogenase (quinone)
DHRSX dehydrogenase/reductase (SDR family) X-linked
DHX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38
DIO3OS DIO3 opposite strand/antisense RNA (head to head)
DKFZP434H168 uncharacterized LOC26077
DMAP1 DNA methyltransferase 1 associated protein 1
DMTF1 cyclin D binding myb-like transcription factor 1
DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2
DOCK1 dedicator of cytokinesis 1
DOK4 docking protein 4
DOLPP1 dolichyldiphosphatase 1
DPH7 diphthamide biosynthesis 7
DPY19L2P4 DPY19L2 pseudogene 4
DUS2 dihydrouridine synthase 2
DVL1 dishevelled segment polarity protein 1
DYNAP dynactin associated protein
E2F5 E2F transcription factor 5, p130-binding
EAF2 ELL associated factor 2
EBF4 early B-cell factor 4
EDC4 enhancer of mRNA decapping 4
EDRF1 erythroid differentiation regulatory factor 1
EIF1AX eukaryotic translation initiation factor 1A, X-linked
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
EIF3H eukaryotic translation initiation factor 3, subunit H
EIF4H eukaryotic translation initiation factor 4H
EMC8 ER membrane protein complex subunit 8
EXD3 exonuclease 3'-5' domain containing 3
EXOSC2 exosome component 2
FAM110B family with sequence similarity 110, member B
FAM151A family with sequence similarity 151, member A
FAM175B family with sequence similarity 175, member B
FAM192A family with sequence similarity 192, member A
FAM35BP family with sequence similarity 35, member A pseudogene
FAM46D family with sequence similarity 46, member D
FAM65A family with sequence similarity 65, member A
FAM69B family with sequence similarity 69, member B
FAM69C family with sequence similarity 69, member C
FAM83H family with sequence similarity 83, member H
FASTK Fas-activated serine/threonine kinase
FBRSL1 fibrosin-like 1
FBXO6 F-box protein 6
FBXW12 F-box and WD repeat domain containing 12
FBXW5 F-box and WD repeat domain containing 5
FEZF2 FEZ family zinc finger 2
FGF17 fibroblast growth factor 17
FLJ41941 uncharacterized LOC100192420
FNDC4 fibronectin type III domain containing 4
FOXP2 forkhead box P2
FOXR1 forkhead box R1
FPGS folylpolyglutamate synthase
FRMD1 FERM domain containing 1
GARNL3 GTPase activating Rap/RanGAP domain-like 3
GATS GATS, stromal antigen 3 opposite strand
GCSH glycine cleavage system protein H (aminomethyl carrier)
GHRH growth hormone releasing hormone
GIN1 gypsy retrotransposon integrase 1
GINS3 GINS complex subunit 3 (Psf3 homolog)
GKAP1 G kinase anchoring protein 1
GLE1 GLE1 RNA export mediator
GLOD4 glyoxalase domain containing 4
GLRX3 glutaredoxin 3
GLUD1 glutamate dehydrogenase 1
GPR148 G protein-coupled receptor 148
GPR153 G protein-coupled receptor 153
GPSM1 G-protein signaling modulator 1
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2
GPX5 glutathione peroxidase 5
GRXCR1 glutaredoxin, cysteine rich 1
GTF2IP1 general transcription factor IIi pseudogene 1
GTF2IRD1 GTF2I repeat domain containing 1
GTF2IRD2 GTF2I repeat domain containing 2
GTF2IRD2P1 GTF2I repeat domain containing 2 pseudogene 1
GTF3C5 general transcription factor IIIC, polypeptide 5, 63kDa
GTPBP1 GTP binding protein 1
H1FX H1 histone family, member X
HCG4 HLA complex group 4 (non-protein coding)
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1
HMCN1 hemicentin 1
HMGB1 high mobility group box 1
HPR haptoglobin-related protein
HSBP1 heat shock factor binding protein 1
HSDL1 hydroxysteroid dehydrogenase like 1
HSF4 heat shock transcription factor 4
HTRA2 HtrA serine peptidase 2
HULC hepatocellular carcinoma up-regulated long non-coding RNA
IFITM4P interferon induced transmembrane protein 4 pseudogene
IKZF5 IKAROS family zinc finger 5 (Pegasus)
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
INPP1 inositol polyphosphate-1-phosphatase
INPP5E inositol polyphosphate-5-phosphatase, 72 kDa
KARS lysyl-tRNA synthetase
KATNB1 katanin p80 (WD repeat containing) subunit B 1
KCNK4 potassium channel, two pore domain subfamily K, member 4
KCNRG potassium channel regulator
KLHDC4 kelch domain containing 4
KLHL17 kelch-like family member 17
KLRK1 killer cell lectin-like receptor subfamily K, member 1
KRTAP26-1 keratin associated protein 26-1
LCE1D late cornified envelope 1D
LINC00094 long intergenic non-protein coding RNA 94
LIX1L Lix1 homolog (chicken) like
LMX1A LIM homeobox transcription factor 1, alpha
LOC100130264 uncharacterized LOC100130264
LOC100272217 uncharacterized LOC100272217
LOC340357 uncharacterized LOC340357
LOC391322 D-dopachrome tautomerase-like
LOC541473 FK506 binding protein 6, 36kDa pseudogene
LOC729609 uncharacterized LOC729609
LOC91450 uncharacterized LOC91450
LRRC3 leucine rich repeat containing 3
LRRC37BP1 leucine rich repeat containing 37B pseudogene 1
LRRC47 leucine rich repeat containing 47
LRSAM1 leucine rich repeat and sterile alpha motif containing 1
LURAP1L leucine rich adaptor protein 1-like
LY6H lymphocyte antigen 6 complex, locus H
LYPD1 LY6/PLAUR domain containing 1
MAF1 MAF1 homolog (S. cerevisiae)
MAGEB16 melanoma antigen family B16
MAGEB6 melanoma antigen family B6
MAMDC4 MAM domain containing 4
MAPK12 mitogen-activated protein kinase 12
MARC1 mitochondrial amidoxime reducing component 1
MAZ MYC-associated zinc finger protein (purine-binding transcription factor)
MBTPS1 membrane-bound transcription factor peptidase, site 1
MCM7 minichromosome maintenance complex component 7
MCMBP minichromosome maintenance complex binding protein
MDH2 malate dehydrogenase 2, NAD (mitochondrial)
MED22 mediator complex subunit 22
MED27 mediator complex subunit 27
METTL10 methyltransferase like 10
METTL12 methyltransferase like 12
MKRN1 makorin ring finger protein 1
MLST8 MTOR associated protein, LST8 homolog (S. cerevisiae)
MMP28 matrix metallopeptidase 28
MOGAT3 monoacylglycerol O-acyltransferase 3
MORC2-AS1 MORC2 antisense RNA 1
MOSPD3 motile sperm domain containing 3
MPHOSPH6 M-phase phosphoprotein 6
MRGPRG-AS1 MRGPRG antisense RNA 1
MRPS2 mitochondrial ribosomal protein S2
MRPS28 mitochondrial ribosomal protein S28
MRTO4 mRNA turnover 4 homolog (S. cerevisiae)
MSANTD3 Myb/SANT-like DNA-binding domain containing 3
MTHFSD methenyltetrahydrofolate synthetase domain containing
MVD mevalonate (diphospho) decarboxylase
NAE1 NEDD8 activating enzyme E1 subunit 1
NAT16 N-acetyltransferase 16 (GCN5-related, putative)
NELFB negative elongation factor complex member B
NFIB nuclear factor I/B
NKAIN1 Na+/K+ transporting ATPase interacting 1
NLGN4X neuroligin 4, X-linked
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae)
NSUN5 NOP2/Sun domain family, member 5
NSUN5P2 NOP2/Sun domain family, member 5 pseudogene 2
NT5C1B 5'-nucleotidase, cytosolic IB
NTNG2 netrin G2
NUTM1 NUT midline carcinoma, family member 1
NUTM2F NUT family member 2F
OAT ornithine aminotransferase
OCM2 oncomodulin 2
ODF1 outer dense fiber of sperm tails 1
OFD1 oral-facial-digital syndrome 1
OLIG2 oligodendrocyte lineage transcription factor 2
OR1K1 olfactory receptor, family 1, subfamily K, member 1
OR2G2 olfactory receptor, family 2, subfamily G, member 2
OR4B1 olfactory receptor, family 4, subfamily B, member 1
OR4F21 olfactory receptor, family 4, subfamily F, member 21
OR4K5 olfactory receptor, family 4, subfamily K, member 5
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR5B3 olfactory receptor, family 5, subfamily B, member 3
OR9Q2 olfactory receptor, family 9, subfamily Q, member 2
PABPN1 poly(A) binding protein, nuclear 1
PANX3 pannexin 3
PCGF2 polycomb group ring finger 2
PDAP1 PDGFA associated protein 1
PDE9A phosphodiesterase 9A
PEX10 peroxisomal biogenesis factor 10
PHF2 PHD finger protein 2
PHKB phosphorylase kinase, beta
PHPT1 phosphohistidine phosphatase 1
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PLAC8L1 PLAC8-like 1
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1
PMPCA peptidase (mitochondrial processing) alpha
PMS2P3 postmeiotic segregation increased 2 pseudogene 3
PNLIPRP1 pancreatic lipase-related protein 1
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
POMT1 protein-O-mannosyltransferase 1
PON1 paraoxonase 1
PON3 paraoxonase 3
POR P450 (cytochrome) oxidoreductase
POTEB POTE ankyrin domain family, member B
PPBPP2 pro-platelet basic protein pseudogene 2
PPP1R26 protein phosphatase 1, regulatory subunit 26
PPP1R2P9 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 9
PRH2 proline-rich protein HaeIII subfamily 2
PRKRIP1 PRKR interacting protein 1 (IL11 inducible)
PRMT7 protein arginine methyltransferase 7
PRODH2 proline dehydrogenase (oxidase) 2
PRR30 proline rich 30
PRSS27 protease, serine 27
PRSS30P protease, serine, 30, pseudogene
PSAT1 phosphoserine aminotransferase 1
PSCA prostate stem cell antigen
PSG6 pregnancy specific beta-1-glycoprotein 6
PSKH1 protein serine kinase H1
PSMB7 proteasome (prosome, macropain) subunit, beta type, 7
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
PTGES2 prostaglandin E synthase 2
PTPRE protein tyrosine phosphatase, receptor type, E
QSOX2 quiescin Q6 sulfhydryl oxidase 2
RAB14 RAB14, member RAS oncogene family
RABEPK Rab9 effector protein with kelch motifs
RABL6 RAB, member RAS oncogene family-like 6
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RAD23B RAD23 homolog B (S. cerevisiae)
RASA4 RAS p21 protein activator 4
RASL10B RAS-like, family 10, member B
RCCD1 RCC1 domain containing 1
REPIN1 replication initiator 1
REXO4 REX4, RNA exonuclease 4 homolog (S. cerevisiae)
RHPN1 rhophilin, Rho GTPase binding protein 1
RNU11 RNA, U11 small nuclear
RPL22 ribosomal protein L22
RPRM reprimo, TP53 dependent G2 arrest mediator candidate
RPSAP9 ribosomal protein SA pseudogene 9
RTP5 receptor (chemosensory) transporter protein 5 (putative)
RXFP2 relaxin/insulin-like family peptide receptor 2
SARS2 seryl-tRNA synthetase 2, mitochondrial
SBDSP1 Shwachman-Bodian-Diamond syndrome pseudogene 1
SCARNA14 small Cajal body-specific RNA 14
SCARNA17 small Cajal body-specific RNA 17
SCTR secretin receptor
SDCBP2 syndecan binding protein (syntenin) 2
SDCCAG3 serologically defined colon cancer antigen 3
SECISBP2 SECIS binding protein 2
SELV selenoprotein V
SERHL serine hydrolase-like (pseudogene)
SET SET nuclear proto-oncogene
SFRP2 secreted frizzled-related protein 2
SGCE sarcoglycan, epsilon
SHARPIN SHANK-associated RH domain interactor
SHFM1 split hand/foot malformation (ectrodactyly) type 1
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC36A3 solute carrier family 36, member 3
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLC7A13 solute carrier family 7 (anionic amino acid transporter), member 13
SLC7A6OS solute carrier family 7, member 6 opposite strand
SLFN11 schlafen family member 11
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa
SNHG7 small nucleolar RNA host gene 7
SNORA11D small nucleolar RNA, H/ACA box 11D
SNORA41 small nucleolar RNA, H/ACA box 41
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA67 small nucleolar RNA, H/ACA box 67
SNORA72 small nucleolar RNA, H/ACA box 72
SOX2 SRY (sex determining region Y)-box 2
SPATA9 spermatogenesis associated 9
SPDYE2 speedy/RINGO cell cycle regulator family member E2
SPG7 spastic paraplegia 7 (pure and complicated autosomal recessive)
SPIRE2 spire-type actin nucleation factor 2
SPRR4 small proline-rich protein 4
SRI sorcin
STAG3L1 stromal antigen 3-like 1 (pseudogene)
STRIP1 striatin interacting protein 1
STYXL1 serine/threonine/tyrosine interacting-like 1
SURF6 surfeit 6
SYCE1L synaptonemal complex central element protein 1-like
TAAR2 trace amine associated receptor 2
TACC2 transforming, acidic coiled-coil containing protein 2
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TAS2R30 taste receptor, type 2, member 30
TAS2R50 taste receptor, type 2, member 50
TATDN1 TatD DNase domain containing 1
TBC1D13 TBC1 domain family, member 13
TBKBP1 TBK1 binding protein 1
TBL2 transducin (beta)-like 2
TCF25 transcription factor 25 (basic helix-loop-helix)
TCP11 t-complex 11, testis-specific
TECTB tectorin beta
TEK TEK tyrosine kinase, endothelial
TEKT5 tektin 5
TERF2 telomeric repeat binding factor 2
TERF2IP telomeric repeat binding factor 2, interacting protein
TEX40 testis expressed 40
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1
TMEM120A transmembrane protein 120A
TMEM128 transmembrane protein 128
TMEM208 transmembrane protein 208
TMEM249 transmembrane protein 249
TMEM27 transmembrane protein 27
TP53TG1 TP53 target 1 (non-protein coding)
TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1
TRAPPC2 trafficking protein particle complex 2
TRAPPC2L trafficking protein particle complex 2-like
TRIM53AP tripartite motif containing 53A, pseudogene
TRIM74 tripartite motif containing 74
TSPAN11 tetraspanin 11
TTF1 transcription termination factor, RNA polymerase I
UBA1 ubiquitin-like modifier activating enzyme 1
UBAC1 UBA domain containing 1
UCK1 uridine-cytidine kinase 1
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
UPK2 uroplakin 2
USP10 ubiquitin specific peptidase 10
USP20 ubiquitin specific peptidase 20
VAC14 Vac14 homolog (S. cerevisiae)
VAV2 vav 2 guanine nucleotide exchange factor
VPS37D vacuolar protein sorting 37 homolog D (S. cerevisiae)
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae)
VPS9D1 VPS9 domain containing 1
WBSCR16 Williams-Beuren syndrome chromosome region 16
WBSCR22 Williams Beuren syndrome chromosome region 22
WDR5 WD repeat domain 5
WDR59 WD repeat domain 59
WDR86 WD repeat domain 86
WDR87 WD repeat domain 87
WRB tryptophan rich basic protein
XPA xeroderma pigmentosum, complementation group A
ZBED1 zinc finger, BED-type containing 1
ZBTB12 zinc finger and BTB domain containing 12
ZBTB32 zinc finger and BTB domain containing 32
ZC2HC1A zinc finger, C2HC-type containing 1A
ZC3H18 zinc finger CCCH-type containing 18
ZMYND19 zinc finger, MYND-type containing 19
ZNF19 zinc finger protein 19
ZNF276 zinc finger protein 276
ZNF277 zinc finger protein 277
ZNF282 zinc finger protein 282
ZNF319 zinc finger protein 319
ZNF34 zinc finger protein 34
ZNF707 zinc finger protein 707
ZNF781 zinc finger protein 781
ZNF821 zinc finger protein 821
ZNF862 zinc finger protein 862
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase
ZRANB1 zinc finger, RAN-binding domain containing 1
ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2

low expression

Symbol Name
GDPGP1 GDP-D-glucose phosphorylase 1
RWDD2B RWD domain containing 2B
SAP130 Sin3A-associated protein, 130kDa
ZNF2 zinc finger protein 2
ZNF630 zinc finger protein 630