Brain Lower Grade Glioma_LGG_TCGA-S9-A7J3-01A-21R-A34R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

210 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A7J3-01A-21R-A34R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1
ACSM2A acyl-CoA synthetase medium-chain family member 2A
ACTL7A actin-like 7A
ADGRV1 adhesion G protein-coupled receptor V1
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide
AHSG alpha-2-HS-glycoprotein
ALK anaplastic lymphoma receptor tyrosine kinase
AMT aminomethyltransferase
AMZ1 archaelysin family metallopeptidase 1
ANGEL1 angel homolog 1 (Drosophila)
ANKRD55 ankyrin repeat domain 55
ANXA9 annexin A9
ARFGEF3 ARFGEF family member 3
ASB1 ankyrin repeat and SOCS box containing 1
ASB14 ankyrin repeat and SOCS box containing 14
ATCAY ataxia, cerebellar, Cayman type
BCYRN1 brain cytoplasmic RNA 1
BEND4 BEN domain containing 4
BIRC6 baculoviral IAP repeat containing 6
BRPF3 bromodomain and PHD finger containing, 3
BRWD3 bromodomain and WD repeat domain containing 3
C15ORF62 chromosome 15 open reading frame 62
C19ORF71 chromosome 19 open reading frame 71
C3P1 complement component 3 precursor pseudogene
C7ORF34 chromosome 7 open reading frame 34
C9ORF156 chromosome 9 open reading frame 156
CBWD5 COBW domain containing 5
CCNG2 cyclin G2
CCNI2 cyclin I family, member 2
CDH16 cadherin 16, KSP-cadherin
CEP350 centrosomal protein 350kDa
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11
CIT citron rho-interacting serine/threonine kinase
COL9A1 collagen, type IX, alpha 1
CPEB4 cytoplasmic polyadenylation element binding protein 4
CRB3 crumbs family member 3
CSMD1 CUB and Sushi multiple domains 1
CSPG4 chondroitin sulfate proteoglycan 4
CXADR coxsackie virus and adenovirus receptor
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
DENND1B DENN/MADD domain containing 1B
DGKG diacylglycerol kinase, gamma 90kDa
DISC2 disrupted in schizophrenia 2 (non-protein coding)
DKFZP434K028 uncharacterized LOC26070
DNAH7 dynein, axonemal, heavy chain 7
EHD1 EH-domain containing 1
ELFN2 extracellular leucine-rich repeat and fibronectin type III domain containing 2
EML5 echinoderm microtubule associated protein like 5
EPN2 epsin 2
EPX eosinophil peroxidase
ETV5 ets variant 5
EVI5L ecotropic viral integration site 5-like
FAM221B family with sequence similarity 221, member B
FAM63A family with sequence similarity 63, member A
FASN fatty acid synthase
FBXL19-AS1 FBXL19 antisense RNA 1 (head to head)
FGFBP3 fibroblast growth factor binding protein 3
FLG filaggrin
FLJ42627 uncharacterized LOC645644
FOXP4 forkhead box P4
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C
GATSL2 GATS protein-like 2
GBP4 guanylate binding protein 4
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GPR27 G protein-coupled receptor 27
GRM5 glutamate receptor, metabotropic 5
GUSBP1 glucuronidase, beta pseudogene 1
H2BFWT H2B histone family, member W, testis-specific
HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2
HIPK2 homeodomain interacting protein kinase 2
HNF1A-AS1 HNF1A antisense RNA 1
HOXD4 homeobox D4
IL1RAPL1 interleukin 1 receptor accessory protein-like 1
IL9 interleukin 9
INSR insulin receptor
KANK1 KN motif and ankyrin repeat domains 1
KCNIP1 Kv channel interacting protein 1
KCNIP3 Kv channel interacting protein 3, calsenilin
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KGFLP1 fibroblast growth factor 7 pseudogene
KIAA2018 KIAA2018
KRBA2 KRAB-A domain containing 2
KRTAP21-2 keratin associated protein 21-2
KSR2 kinase suppressor of ras 2
LCOR ligand dependent nuclear receptor corepressor
LINC00176 long intergenic non-protein coding RNA 176
LINC00574 long intergenic non-protein coding RNA 574
LINC00588 long intergenic non-protein coding RNA 588
LOC154449 uncharacterized LOC154449
LOC220729 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene
LOC283332 uncharacterized LOC283332
LOC285692 uncharacterized LOC285692
LRP4 low density lipoprotein receptor-related protein 4
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene
LRRTM3 leucine rich repeat transmembrane neuronal 3
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
MAP3K13 mitogen-activated protein kinase kinase kinase 13
MCM3AP-AS1 MCM3AP antisense RNA 1
MDN1 MDN1, midasin homolog (yeast)
MEGF11 multiple EGF-like-domains 11
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MRVI1 murine retrovirus integration site 1 homolog
MTCL1 microtubule crosslinking factor 1
MYT1 myelin transcription factor 1
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NACC2 NACC family member 2, BEN and BTB (POZ) domain containing
NAGS N-acetylglutamate synthase
NAV1 neuron navigator 1
NMUR2 neuromedin U receptor 2
NRDE2 NRDE-2, necessary for RNA interference, domain containing
NSUN3 NOP2/Sun domain family, member 3
NUTM2D NUT family member 2D
NXPE2 neurexophilin and PC-esterase domain family, member 2
NXPH1 neurexophilin 1
OCLN occludin
OR2A1 olfactory receptor, family 2, subfamily A, member 1
OR2A12 olfactory receptor, family 2, subfamily A, member 12
OR2A2 olfactory receptor, family 2, subfamily A, member 2
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OR5AU1 olfactory receptor, family 5, subfamily AU, member 1
OSBPL5 oxysterol binding protein-like 5
OTUD7A OTU deubiquitinase 7A
PAX5 paired box 5
PBOV1 prostate and breast cancer overexpressed 1
PCDHA13 protocadherin alpha 13
PCDHA2 protocadherin alpha 2
PCDHA5 protocadherin alpha 5
PCDHA8 protocadherin alpha 8
PCDHB16 protocadherin beta 16
PCDHB3 protocadherin beta 3
PCDHGA3 protocadherin gamma subfamily A, 3
PCDHGB1 protocadherin gamma subfamily B, 1
PDZD2 PDZ domain containing 2
PEG3-AS1 PEG3 antisense RNA 1
PHLDA1 pleckstrin homology-like domain, family A, member 1
PKD1L3 polycystic kidney disease 1-like 3
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive)
PRDM11 PR domain containing 11
PROX1 prospero homeobox 1
PRX periaxin
RAB31 RAB31, member RAS oncogene family
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
RGMB repulsive guidance molecule family member b
RNF44 ring finger protein 44
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila)
SCARNA15 small Cajal body-specific RNA 15
SCARNA4 small Cajal body-specific RNA 4
SDHAP2 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2
SGCZ sarcoglycan, zeta
SHC3 SHC (Src homology 2 domain containing) transforming protein 3
SHISA6 shisa family member 6
SLC25A2 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
SLC26A1 solute carrier family 26 (anion exchanger), member 1
SLC35F1 solute carrier family 35, member F1
SLC35G6 solute carrier family 35, member G6
SLC38A2 solute carrier family 38, member 2
SLC52A3 solute carrier family 52 (riboflavin transporter), member 3
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLCO4A1 solute carrier organic anion transporter family, member 4A1
SLFN12L schlafen family member 12-like
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase
SMOC1 SPARC related modular calcium binding 1
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA22 small nucleolar RNA, H/ACA box 22
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA59B small nucleolar RNA, H/ACA box 59B
SNORD115-13 small nucleolar RNA, C/D box 115-13
SNORD115-7 small nucleolar RNA, C/D box 115-7
SPOPL speckle-type POZ protein-like
SYT14 synaptotagmin XIV
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TBC1D21 TBC1 domain family, member 21
TBC1D3P1-DHX40P1 TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
TBX5 T-box 5
TDRD6 tudor domain containing 6
TEKT5 tektin 5
TMEM179 transmembrane protein 179
TNK2 tyrosine kinase, non-receptor, 2
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
TNR tenascin R
TNRC6B trinucleotide repeat containing 6B
TPCN1 two pore segment channel 1
TREH trehalase (brush-border membrane glycoprotein)
TRIM6-TRIM34 TRIM6-TRIM34 readthrough
TRPC3 transient receptor potential cation channel, subfamily C, member 3
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TSHB thyroid stimulating hormone, beta
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate)
TSSK4 testis-specific serine kinase 4
UGT2B11 UDP glucuronosyltransferase 2 family, polypeptide B11
USP54 ubiquitin specific peptidase 54
VASH1 vasohibin 1
WDFY3 WD repeat and FYVE domain containing 3
WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial
XYLT1 xylosyltransferase I
ZBTB24 zinc finger and BTB domain containing 24
ZBTB8B zinc finger and BTB domain containing 8B
ZCCHC24 zinc finger, CCHC domain containing 24
ZNF462 zinc finger protein 462
ZNF469 zinc finger protein 469
ZNF99 zinc finger protein 99
ZSWIM4 zinc finger, SWIM-type containing 4
ZZEF1 zinc finger, ZZ-type with EF-hand domain 1