Brain Lower Grade Glioma_LGG_TCGA-S9-A7J2-01A-11R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

378 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A7J2-01A-11R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ACHE acetylcholinesterase (Yt blood group)
ACSL6 acyl-CoA synthetase long-chain family member 6
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5
ADCK1 aarF domain containing kinase 1
ADCY6 adenylate cyclase 6
ADGRG1 adhesion G protein-coupled receptor G1
ADGRV1 adhesion G protein-coupled receptor V1
AFAP1L2 actin filament associated protein 1-like 2
AIRE autoimmune regulator
ALMS1P Alstrom syndrome 1 pseudogene
AMH anti-Mullerian hormone
ANGEL1 angel homolog 1 (Drosophila)
ANKRD19P ankyrin repeat domain 19, pseudogene
ANKRD29 ankyrin repeat domain 29
ANKRD31 ankyrin repeat domain 31
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
ANO2 anoctamin 2, calcium activated chloride channel
ANO8 anoctamin 8
ANP32A-IT1 ANP32A intronic transcript 1
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ARL13A ADP-ribosylation factor-like 13A
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ATG16L2 autophagy related 16-like 2 (S. cerevisiae)
ATHL1 ATH1, acid trehalase-like 1 (yeast)
BCYRN1 brain cytoplasmic RNA 1
BMPER BMP binding endothelial regulator
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BTNL2 butyrophilin-like 2
C11ORF42 chromosome 11 open reading frame 42
C15ORF39 chromosome 15 open reading frame 39
C15ORF62 chromosome 15 open reading frame 62
C19ORF45 chromosome 19 open reading frame 45
C2ORF72 chromosome 2 open reading frame 72
C2ORF78 chromosome 2 open reading frame 78
C3ORF70 chromosome 3 open reading frame 70
C4ORF29 chromosome 4 open reading frame 29
C5 complement component 5
C5ORF60 chromosome 5 open reading frame 60
C9ORF173 chromosome 9 open reading frame 173
CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
CAMSAP3 calmodulin regulated spectrin-associated protein family, member 3
CARD10 caspase recruitment domain family, member 10
CBS cystathionine-beta-synthase
CCDC144A coiled-coil domain containing 144A
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC154 coiled-coil domain containing 154
CD1D CD1d molecule
CDAN1 codanin 1
CDC14B cell division cycle 14B
CDKL1 cyclin-dependent kinase-like 1 (CDC2-related kinase)
CECR2 cat eye syndrome chromosome region, candidate 2
CECR6 cat eye syndrome chromosome region, candidate 6
CERKL ceramide kinase-like
CLEC4F C-type lectin domain family 4, member F
CMKLR1 chemerin chemokine-like receptor 1
COLGALT2 collagen beta(1-O)galactosyltransferase 2
CORO6 coronin 6
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor
CRIPAK cysteine-rich PAK1 inhibitor
CRTAC1 cartilage acidic protein 1
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CT62 cancer/testis antigen 62
CXXC4 CXXC finger protein 4
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7
D2HGDH D-2-hydroxyglutarate dehydrogenase
DAB2IP DAB2 interacting protein
DAND5 DAN domain family member 5, BMP antagonist
DCST1 DC-STAMP domain containing 1
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DEF8 differentially expressed in FDCP 8 homolog (mouse)
DKFZP434L187 uncharacterized LOC26082
DOK5 docking protein 5
DST dystonin
EBF4 early B-cell factor 4
ECE2 endothelin converting enzyme 2
EDA ectodysplasin A
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3
EFCAB13 EF-hand calcium binding domain 13
EFNA3 ephrin-A3
EHMT2 euchromatic histone-lysine N-methyltransferase 2
EML5 echinoderm microtubule associated protein like 5
ENGASE endo-beta-N-acetylglucosaminidase
EP400 E1A binding protein p400
EPX eosinophil peroxidase
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FAM101B family with sequence similarity 101, member B
FAM106A family with sequence similarity 106, member A
FAM193B family with sequence similarity 193, member B
FAM83E family with sequence similarity 83, member E
FBXL8 F-box and leucine-rich repeat protein 8
FBXO10 F-box protein 10
FGF22 fibroblast growth factor 22
FHDC1 FH2 domain containing 1
FLJ34503 uncharacterized FLJ34503
FLVCR2 feline leukemia virus subgroup C cellular receptor family, member 2
FLYWCH1 FLYWCH-type zinc finger 1
FMR1-AS1 FMR1 antisense RNA 1
FOXG1 forkhead box G1
FOXN3 forkhead box N3
FSCN1 fascin actin-bundling protein 1
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1
GAD1 glutamate decarboxylase 1 (brain, 67kDa)
GALNT16 polypeptide N-acetylgalactosaminyltransferase 16
GAS8-AS1 GAS8 antisense RNA 1
GATA5 GATA binding protein 5
GCKR glucokinase (hexokinase 4) regulator
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GFRAL GDNF family receptor alpha like
GK5 glycerol kinase 5 (putative)
GLIPR1L1 GLI pathogenesis-related 1 like 1
GLIS2 GLIS family zinc finger 2
GLP1R glucagon-like peptide 1 receptor
GOLGA8B golgin A8 family, member B
GPR148 G protein-coupled receptor 148
GPR27 G protein-coupled receptor 27
GREB1 growth regulation by estrogen in breast cancer 1
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein
GRTP1 growth hormone regulated TBC protein 1
GRXCR2 glutaredoxin, cysteine rich 2
HAPLN1 hyaluronan and proteoglycan link protein 1
HAUS4 HAUS augmin-like complex, subunit 4
HBQ1 hemoglobin, theta 1
HDAC6 histone deacetylase 6
HIGD1C HIG1 hypoxia inducible domain family, member 1C
HKDC1 hexokinase domain containing 1
HOOK2 hook microtubule-tethering protein 2
HSF2BP heat shock transcription factor 2 binding protein
HSF4 heat shock transcription factor 4
IDUA iduronidase, alpha-L-
IFITM4P interferon induced transmembrane protein 4 pseudogene
IGDCC3 immunoglobulin superfamily, DCC subclass, member 3
IGSF9B immunoglobulin superfamily, member 9B
ILDR2 immunoglobulin-like domain containing receptor 2
INE1 inactivation escape 1 (non-protein coding)
INHA inhibin, alpha
INVS inversin
KAT2A K(lysine) acetyltransferase 2A
KCNAB3 potassium channel, voltage gated subfamily A regulatory beta subunit 3
KCNH7 potassium channel, voltage gated eag related subfamily H, member 7
KCNIP2 Kv channel interacting protein 2
KCNK3 potassium channel, two pore domain subfamily K, member 3
KIAA1161 KIAA1161
KIAA1456 KIAA1456
KIAA1875 KIAA1875
KIF21B kinesin family member 21B
KLF1 Kruppel-like factor 1 (erythroid)
KLHL23 kelch-like family member 23
KLK9 kallikrein-related peptidase 9
KRBA2 KRAB-A domain containing 2
KRTAP19-8 keratin associated protein 19-8
KSR1 kinase suppressor of ras 1
KTN1-AS1 KTN1 antisense RNA 1
LAMA3 laminin, alpha 3
LCAT lecithin-cholesterol acyltransferase
LCNL1 lipocalin-like 1
LINC00032 long intergenic non-protein coding RNA 32
LINC00161 long intergenic non-protein coding RNA 161
LINC00173 long intergenic non-protein coding RNA 173
LINC00176 long intergenic non-protein coding RNA 176
LINC00235 long intergenic non-protein coding RNA 235
LINC00319 long intergenic non-protein coding RNA 319
LINC00593 long intergenic non-protein coding RNA 593
LINC01590 long intergenic non-protein coding RNA 1590
LINGO3 leucine rich repeat and Ig domain containing 3
LLGL2 lethal giant larvae homolog 2 (Drosophila)
LOC145783 uncharacterized LOC145783
LOC285692 uncharacterized LOC285692
LOC389332 uncharacterized LOC389332
LOC400927 TPTE and PTEN homologous inositol lipid phosphatase pseudogene
LOC613037 nuclear pore complex interacting protein pseudogene
LOC728323 uncharacterized LOC728323
LONRF1 LON peptidase N-terminal domain and ring finger 1
LOR loricrin
LPPR3 lipid phosphate phosphatase-related protein type 3
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
LRRC16B leucine rich repeat containing 16B
LRRN1 leucine rich repeat neuronal 1
LRRTM3 leucine rich repeat transmembrane neuronal 3
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MAGEB4 melanoma antigen family B4
MAP3K12 mitogen-activated protein kinase kinase kinase 12
MAPK12 mitogen-activated protein kinase 12
MAPKBP1 mitogen-activated protein kinase binding protein 1
MCM3AP-AS1 MCM3AP antisense RNA 1
MCMDC2 minichromosome maintenance domain containing 2
MED12 mediator complex subunit 12
MEIOB meiosis specific with OB domains
METTL10 methyltransferase like 10
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
MLLT4-AS1 MLLT4 antisense RNA 1 (head to head)
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
MLXIP MLX interacting protein
MMD2 monocyte to macrophage differentiation-associated 2
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae)
MN1 meningioma (disrupted in balanced translocation) 1
MOB3B MOB kinase activator 3B
MROH9 maestro heat-like repeat family member 9
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MST1 macrophage stimulating 1
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NAT8B N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)
NAV1 neuron navigator 1
NBEAL1 neurobeachin-like 1
NBEAL2 neurobeachin-like 2
NBPF15 neuroblastoma breakpoint family, member 15
NBPF7 neuroblastoma breakpoint family, member 7
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NHEG1 neuroblastoma highly expressed 1
NHSL1 NHS-like 1
NKX1-2 NK1 homeobox 2
NOG noggin
NOTCH1 notch 1
NOTUM notum pectinacetylesterase homolog (Drosophila)
NPW neuropeptide W
NR6A1 nuclear receptor subfamily 6, group A, member 1
NRP2 neuropilin 2
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13
NXPE2 neurexophilin and PC-esterase domain family, member 2
OBSL1 obscurin-like 1
OR11H1 olfactory receptor, family 11, subfamily H, member 1
OR2T34 olfactory receptor, family 2, subfamily T, member 34
OR2T6 olfactory receptor, family 2, subfamily T, member 6
OR51L1 olfactory receptor, family 51, subfamily L, member 1
OR56A5 olfactory receptor, family 56, subfamily A, member 5
OR5K2 olfactory receptor, family 5, subfamily K, member 2
OR8S1 olfactory receptor, family 8, subfamily S, member 1
P4HA3 prolyl 4-hydroxylase, alpha polypeptide III
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PCDHA5 protocadherin alpha 5
PCDHB15 protocadherin beta 15
PCDHB5 protocadherin beta 5
PCDHB9 protocadherin beta 9
PCDHGB1 protocadherin gamma subfamily B, 1
PCDHGB5 protocadherin gamma subfamily B, 5
PDC phosducin
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PEAK1 pseudopodium-enriched atypical kinase 1
PGBD4 piggyBac transposable element derived 4
PIEZO1 piezo-type mechanosensitive ion channel component 1
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific)
PLK5 polo-like kinase 5
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2)
PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A
PPP1R26 protein phosphatase 1, regulatory subunit 26
PPP1R3E protein phosphatase 1, regulatory subunit 3E
PRO0611 PRO0611 protein
PROX2 prospero homeobox 2
PSAPL1 prosaposin-like 1 (gene/pseudogene)
PVRIG poliovirus receptor related immunoglobulin domain containing
PXDN peroxidasin
RASL10A RAS-like, family 10, member A
RBP2 retinol binding protein 2, cellular
RCCD1 RCC1 domain containing 1
RGL3 ral guanine nucleotide dissociation stimulator-like 3
RGL4 ral guanine nucleotide dissociation stimulator-like 4
RGS11 regulator of G-protein signaling 11
RHBDL1 rhomboid, veinlet-like 1 (Drosophila)
RNF207 ring finger protein 207
RPL10L ribosomal protein L10-like
RPL23AP64 ribosomal protein L23a pseudogene 64
RRAGD Ras-related GTP binding D
RRH retinal pigment epithelium-derived rhodopsin homolog
SCARNA8 small Cajal body-specific RNA 8
SDHAP3 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3
SEZ6 seizure related 6 homolog (mouse)
SF3A1 splicing factor 3a, subunit 1, 120kDa
SGK223 homolog of rat pragma of Rnd2
SGSM1 small G protein signaling modulator 1
SH2B2 SH2B adaptor protein 2
SH3GL1 SH3-domain GRB2-like 1
SHPRH SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase
SKOR1 SKI family transcriptional corepressor 1
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16
SLC26A1 solute carrier family 26 (anion exchanger), member 1
SLC35D3 solute carrier family 35, member D3
SLC35G1 solute carrier family 35, member G1
SLC36A3 solute carrier family 36, member 3
SLC38A7 solute carrier family 38, member 7
SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18
SLIT1 slit homolog 1 (Drosophila)
SLITRK2 SLIT and NTRK-like family, member 2
SLMO1 slowmo homolog 1 (Drosophila)
SMAD9 SMAD family member 9
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase
SMG7 SMG7 nonsense mediated mRNA decay factor
SMTNL2 smoothelin-like 2
SMYD4 SET and MYND domain containing 4
SNCAIP synuclein, alpha interacting protein
SNORA13 small nucleolar RNA, H/ACA box 13
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA51 small nucleolar RNA, H/ACA box 51
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA71E small nucleolar RNA, H/ACA box 71E
SNORD115-7 small nucleolar RNA, C/D box 115-7
SNORD89 small nucleolar RNA, C/D box 89
SPATA25 spermatogenesis associated 25
SPIN3 spindlin family, member 3
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
SSPO SCO-spondin
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STAG3L1 stromal antigen 3-like 1 (pseudogene)
STAMBPL1 STAM binding protein-like 1
STX6 syntaxin 6
SUGCT succinyl-CoA:glutarate-CoA transferase
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
TAL2 T-cell acute lymphocytic leukemia 2
TAS2R4 taste receptor, type 2, member 4
TBC1D10A TBC1 domain family, member 10A
TBX6 T-box 6
TCEAL6 transcription elongation factor A (SII)-like 6
TDRP testis development related protein
TET1 tet methylcytosine dioxygenase 1
THSD4 thrombospondin, type I, domain containing 4
TMEM120B transmembrane protein 120B
TMEM257 transmembrane protein 257
TMEM74B transmembrane protein 74B
TNK2 tyrosine kinase, non-receptor, 2
TOX2 TOX high mobility group box family member 2
TRAF3 TNF receptor-associated factor 3
TRAPPC9 trafficking protein particle complex 9
TRIM67 tripartite motif containing 67
TSC2 tuberous sclerosis 2
TSSK4 testis-specific serine kinase 4
TTLL4 tubulin tyrosine ligase-like family member 4
TTLL8 tubulin tyrosine ligase-like family member 8
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
TTTY23 testis-specific transcript, Y-linked 23 (non-protein coding)
ULK4P2 ULK4 pseudogene 2
ULK4P3 ULK4 pseudogene 3
USP44 ubiquitin specific peptidase 44
UVSSA UV-stimulated scaffold protein A
VASH1 vasohibin 1
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae)
VSIG10 V-set and immunoglobulin domain containing 10
VWC2L von Willebrand factor C domain containing protein 2-like
WDR27 WD repeat domain 27
WDR86 WD repeat domain 86
WFDC11 WAP four-disulfide core domain 11
WFDC8 WAP four-disulfide core domain 8
WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1
WNK4 WNK lysine deficient protein kinase 4
YBX2 Y box binding protein 2
ZBTB25 zinc finger and BTB domain containing 25
ZBTB37 zinc finger and BTB domain containing 37
ZBTB47 zinc finger and BTB domain containing 47
ZDHHC22 zinc finger, DHHC-type containing 22
ZFP92 ZFP92 zinc finger protein
ZMYM3 zinc finger, MYM-type 3
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF219 zinc finger protein 219
ZNF467 zinc finger protein 467
ZNF514 zinc finger protein 514
ZNF592 zinc finger protein 592
ZNF676 zinc finger protein 676
ZNF687 zinc finger protein 687
ZNF705A zinc finger protein 705A
ZNF778 zinc finger protein 778
ZNF81 zinc finger protein 81
ZNF843 zinc finger protein 843
ZNF99 zinc finger protein 99

low expression

Symbol Name
BCAS2 breast carcinoma amplified sequence 2
BSDC1 BSD domain containing 1
DNM2 dynamin 2
PAIP2 poly(A) binding protein interacting protein 2