Brain Lower Grade Glioma_LGG_TCGA-S9-A6WQ-01A-12R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

246 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A6WQ-01A-12R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD17A abhydrolase domain containing 17A
ABHD6 abhydrolase domain containing 6
ACSM1 acyl-CoA synthetase medium-chain family member 1
ACTC1 actin, alpha, cardiac muscle 1
ACTL8 actin-like 8
ADGRE4P adhesion G protein-coupled receptor E4, pseudogene
ADIRF adipogenesis regulatory factor
ADRB2 adrenoceptor beta 2, surface
ANTXRL anthrax toxin receptor-like
APLP1 amyloid beta (A4) precursor-like protein 1
ARHGAP22 Rho GTPase activating protein 22
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16
ASCL3 achaete-scute family bHLH transcription factor 3
ASCL4 achaete-scute family bHLH transcription factor 4
ASIC5 acid sensing (proton gated) ion channel family member 5
ASIP agouti signaling protein
BIN1 bridging integrator 1
BOK BCL2-related ovarian killer
C11ORF52 chromosome 11 open reading frame 52
C17ORF82 chromosome 17 open reading frame 82
C1ORF229 chromosome 1 open reading frame 229
C3P1 complement component 3 precursor pseudogene
C4ORF51 chromosome 4 open reading frame 51
C8B complement component 8, beta polypeptide
CAPN3 calpain 3, (p94)
CARD14 caspase recruitment domain family, member 14
CARNS1 carnosine synthase 1
CCDC146 coiled-coil domain containing 146
CCDC38 coiled-coil domain containing 38
CCDC54 coiled-coil domain containing 54
CDK18 cyclin-dependent kinase 18
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CECR5-AS1 CECR5 antisense RNA 1
CLCA2 chloride channel accessory 2
CLDN7 claudin 7
CLDND2 claudin domain containing 2
CLEC9A C-type lectin domain family 9, member A
CLECL1 C-type lectin-like 1
CLRN2 clarin 2
CNGA1 cyclic nucleotide gated channel alpha 1
COMMD1 copper metabolism (Murr1) domain containing 1
COX8C cytochrome c oxidase subunit VIIIC
CRNN cornulin
CRYAB crystallin, alpha B
CSK c-src tyrosine kinase
CYP11B1 cytochrome P450, family 11, subfamily B, polypeptide 1
DBNDD2 dysbindin (dystrobrevin binding protein 1) domain containing 2
DDTL D-dopachrome tautomerase-like
DEFB109P1B defensin, beta 109, pseudogene 1B
DEFB123 defensin, beta 123
DEFB132 defensin, beta 132
DNAH17 dynein, axonemal, heavy chain 17
DOHH deoxyhypusine hydroxylase/monooxygenase
DYNAP dynactin associated protein
EEF1A1 eukaryotic translation elongation factor 1 alpha 1
EHD1 EH-domain containing 1
ELOVL1 ELOVL fatty acid elongase 1
EML2 echinoderm microtubule associated protein like 2
FAM170A family with sequence similarity 170, member A
FAM212A family with sequence similarity 212, member A
FAM3B family with sequence similarity 3, member B
FNTB farnesyltransferase, CAAX box, beta
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FOLH1B folate hydrolase 1B
FRAT1 frequently rearranged in advanced T-cell lymphomas 1
FXYD4 FXYD domain containing ion transport regulator 4
GADD45G growth arrest and DNA-damage-inducible, gamma
GAGE12J G antigen 12J
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6
GJA3 gap junction protein, alpha 3, 46kDa
GJB1 gap junction protein, beta 1, 32kDa
GJC2 gap junction protein, gamma 2, 47kDa
GLIS1 GLIS family zinc finger 1
GLTSCR2 glioma tumor suppressor candidate region gene 2
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
GPR62 G protein-coupled receptor 62
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2
GSN gelsolin
HAPLN2 hyaluronan and proteoglycan link protein 2
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HEATR9 HEAT repeat containing 9
HHATL hedgehog acyltransferase-like
HIST3H2A histone cluster 3, H2a
HMSD histocompatibility (minor) serpin domain containing
HOXD1 homeobox D1
HSPA2 heat shock 70kDa protein 2
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
IL2 interleukin 2
INPP1 inositol polyphosphate-1-phosphatase
IRF6 interferon regulatory factor 6
IVL involucrin
JOSD2 Josephin domain containing 2
KANK4 KN motif and ankyrin repeat domains 4
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KIF25 kinesin family member 25
KIR2DL1 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1
KLK6 kallikrein-related peptidase 6
KLRF1 killer cell lectin-like receptor subfamily F, member 1
KRT14 keratin 14, type I
KRT16 keratin 16, type I
KRT40 keratin 40, type I
KRT5 keratin 5, type II
KRT6A keratin 6A, type II
KRT6B keratin 6B, type II
KRT6C keratin 6C, type II
KRTAP6-3 keratin associated protein 6-3
LCE1D late cornified envelope 1D
LCE1E late cornified envelope 1E
LCE3E late cornified envelope 3E
LDB3 LIM domain binding 3
LDLRAP1 low density lipoprotein receptor adaptor protein 1
LEKR1 leucine, glutamate and lysine rich 1
LGALS7 lectin, galactoside-binding, soluble, 7
LINC00235 long intergenic non-protein coding RNA 235
LINC00238 long intergenic non-protein coding RNA 238
LINC00323 long intergenic non-protein coding RNA 323
LINC00341 long intergenic non-protein coding RNA 341
LIPE lipase, hormone-sensitive
LOC100133331 uncharacterized LOC100133331
LOC389033 placenta-specific 9 pseudogene
LTBP4 latent transforming growth factor beta binding protein 4
LTC4S leukotriene C4 synthase
LZTS2 leucine zipper, putative tumor suppressor 2
MAG myelin associated glycoprotein
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MAP6D1 MAP6 domain containing 1
MAP7D1 MAP7 domain containing 1
MBP myelin basic protein
MEP1A meprin A, alpha (PABA peptide hydrolase)
MOBP myelin-associated oligodendrocyte basic protein
MOG myelin oligodendrocyte glycoprotein
MVB12B multivesicular body subunit 12B
MYO1A myosin IA
MYOM3 myomesin 3
NINJ2 ninjurin 2
NIPAL4 NIPA-like domain containing 4
NKAIN2 Na+/K+ transporting ATPase interacting 2
NKX2-8 NK2 homeobox 8
NKX6-2 NK6 homeobox 2
NPPB natriuretic peptide B
NPY neuropeptide Y
NUDT18 nudix (nucleoside diphosphate linked moiety X)-type motif 18
OPN5 opsin 5
OR13C2 olfactory receptor, family 13, subfamily C, member 2
OR13C4 olfactory receptor, family 13, subfamily C, member 4
OR13C5 olfactory receptor, family 13, subfamily C, member 5
OR13C9 olfactory receptor, family 13, subfamily C, member 9
OR2C3 olfactory receptor, family 2, subfamily C, member 3
OR51B2 olfactory receptor, family 51, subfamily B, member 2 (gene/pseudogene)
OR52N1 olfactory receptor, family 52, subfamily N, member 1
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OR9A2 olfactory receptor, family 9, subfamily A, member 2
PACS2 phosphofurin acidic cluster sorting protein 2
PCDHGA2 protocadherin gamma subfamily A, 2
PCSK6 proprotein convertase subtilisin/kexin type 6
PDIA2 protein disulfide isomerase family A, member 2
PGA3 pepsinogen 3, group I (pepsinogen A)
PGLYRP3 peptidoglycan recognition protein 3
PGLYRP4 peptidoglycan recognition protein 4
PI3 peptidase inhibitor 3, skin-derived
PIGR polymeric immunoglobulin receptor
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent)
PLD4 phospholipase D family, member 4
PPIAL4G peptidylprolyl isomerase A (cyclophilin A)-like 4G
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A
PRR27 proline rich 27
PRSS41 protease, serine, 41
PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding)
PTPRH protein tyrosine phosphatase, receptor type, H
RBP7 retinol binding protein 7, cellular
RGS2 regulator of G-protein signaling 2
RHOG ras homolog family member G
RIMBP3 RIMS binding protein 3
RPL13AP6 ribosomal protein L13a pseudogene 6
RPS10P7 ribosomal protein S10 pseudogene 7
RSPH6A radial spoke head 6 homolog A (Chlamydomonas)
RTP3 receptor (chemosensory) transporter protein 3
S100A2 S100 calcium binding protein A2
S1PR5 sphingosine-1-phosphate receptor 5
SCARNA20 small Cajal body-specific RNA 20
SCGB1C1 secretoglobin, family 1C, member 1
SEC14L5 SEC14-like 5 (S. cerevisiae)
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
SEPT4 septin 4
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SFN stratifin
SGK2 serum/glucocorticoid regulated kinase 2
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC31A2 solute carrier family 31 (copper transporter), member 2
SLC45A3 solute carrier family 45, member 3
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SNORA28 small nucleolar RNA, H/ACA box 28
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA41 small nucleolar RNA, H/ACA box 41
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA55 small nucleolar RNA, H/ACA box 55
SNX31 sorting nexin 31
SPRR1B small proline-rich protein 1B
SSR4P1 signal sequence receptor, delta pseudogene 1
SSTR5 somatostatin receptor 5
TAS2R40 taste receptor, type 2, member 40
TAS2R9 taste receptor, type 2, member 9
TBATA thymus, brain and testes associated
TBC1D17 TBC1 domain family, member 17
TBX10 T-box 10
TCFL5 transcription factor-like 5 (basic helix-loop-helix)
TEX36 testis expressed 36
TFEB transcription factor EB
TIMP4 TIMP metallopeptidase inhibitor 4
TMC6 transmembrane channel-like 6
TMCC2 transmembrane and coiled-coil domain family 2
TMEM100 transmembrane protein 100
TMEM125 transmembrane protein 125
TMEM139 transmembrane protein 139
TMEM151A transmembrane protein 151A
TMEM88B transmembrane protein 88B
TNS4 tensin 4
TP53INP2 tumor protein p53 inducible nuclear protein 2
TRAPPC6A trafficking protein particle complex 6A
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TSPAN8 tetraspanin 8
TUBB7P tubulin, beta 7, pseudogene
UBL4B ubiquitin-like 4B
USP50 ubiquitin specific peptidase 50
VN1R2 vomeronasal 1 receptor 2
WDR88 WD repeat domain 88
XRRA1 X-ray radiation resistance associated 1
ZFAT-AS1 ZFAT antisense RNA 1
ZFP57 ZFP57 zinc finger protein
ZNF645 zinc finger protein 645

low expression

Symbol Name
ASB8 ankyrin repeat and SOCS box containing 8
BRAP BRCA1 associated protein
C12ORF29 chromosome 12 open reading frame 29
COPS8 COP9 signalosome subunit 8
CSRNP2 cysteine-serine-rich nuclear protein 2
CUL3 cullin 3
EIF4E2 eukaryotic translation initiation factor 4E family member 2
FAM160B1 family with sequence similarity 160, member B1
LOC728613 programmed cell death 6 pseudogene
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
UBE2N ubiquitin-conjugating enzyme E2N
WDFY1 WD repeat and FYVE domain containing 1