Brain Lower Grade Glioma_LGG_TCGA-S9-A6WE-01A-12R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

243 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A6WE-01A-12R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ACAT2 acetyl-CoA acetyltransferase 2
ADA adenosine deaminase
ADM adrenomedullin
AFAP1L2 actin filament associated protein 1-like 2
AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)
AKAP7 A kinase (PRKA) anchor protein 7
AKIRIN2 akirin 2
AMZ1 archaelysin family metallopeptidase 1
ANKRD37 ankyrin repeat domain 37
ANKRD55 ankyrin repeat domain 55
ANXA9 annexin A9
ARHGAP10 Rho GTPase activating protein 10
ARL4A ADP-ribosylation factor-like 4A
ASIC1 acid sensing (proton gated) ion channel 1
ATCAY ataxia, cerebellar, Cayman type
BARHL1 BarH-like homeobox 1
BCAR1 breast cancer anti-estrogen resistance 1
BEND4 BEN domain containing 4
BMP7 bone morphogenetic protein 7
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3
C15ORF57 chromosome 15 open reading frame 57
C16ORF72 chromosome 16 open reading frame 72
C20ORF196 chromosome 20 open reading frame 196
C2ORF27A chromosome 2 open reading frame 27A
C4ORF51 chromosome 4 open reading frame 51
CACNG2 calcium channel, voltage-dependent, gamma subunit 2
CAMSAP3 calmodulin regulated spectrin-associated protein family, member 3
CAPN14 calpain 14
CCDC117 coiled-coil domain containing 117
CCDC63 coiled-coil domain containing 63
CCDC7 coiled-coil domain containing 7
CDA cytidine deaminase
CDHR1 cadherin-related family member 1
CDKN2A-AS1 CDKN2A antisense RNA 1 (head to head)
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11
CNOT8 CCR4-NOT transcription complex, subunit 8
CNTN6 contactin 6
COG2 component of oligomeric golgi complex 2
COL9A1 collagen, type IX, alpha 1
CORO7 coronin 7
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor
CREB3L1 cAMP responsive element binding protein 3-like 1
CSPG4 chondroitin sulfate proteoglycan 4
CSRP2BP CSRP2 binding protein
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae)
CXADR coxsackie virus and adenovirus receptor
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1
DACH1 dachshund family transcription factor 1
DCAF12L2 DDB1 and CUL4 associated factor 12-like 2
DCX doublecortin
DDIT4 DNA-damage-inducible transcript 4
DMRTC1 DMRT-like family C1
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DNMBP-AS1 DNMBP antisense RNA 1
DTD1 D-tyrosyl-tRNA deacylase 1
DUSP19 dual specificity phosphatase 19
EHD3 EH-domain containing 3
ELFN2 extracellular leucine-rich repeat and fibronectin type III domain containing 2
EPN2 epsin 2
ETV1 ets variant 1
ETV5 ets variant 5
EVI5L ecotropic viral integration site 5-like
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM21A family with sequence similarity 21, member A
FAM221B family with sequence similarity 221, member B
FAM226B family with sequence similarity 226, member B (non-protein coding)
FAM27B family with sequence similarity 27, member B
FAM66A family with sequence similarity 66, member A
FAM66E family with sequence similarity 66, member E
FAM84A family with sequence similarity 84, member A
FDFT1 farnesyl-diphosphate farnesyltransferase 1
FDPS farnesyl diphosphate synthase
FGFBP3 fibroblast growth factor binding protein 3
FLJ42393 uncharacterized LOC401105
FLRT3 fibronectin leucine rich transmembrane protein 3
FOXF1 forkhead box F1
GAL3ST1 galactose-3-O-sulfotransferase 1
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6
GFRA1 GDNF family receptor alpha 1
GIN1 gypsy retrotransposon integrase 1
GLDC glycine dehydrogenase (decarboxylating)
GPR161 G protein-coupled receptor 161
GPR27 G protein-coupled receptor 27
GRID1 glutamate receptor, ionotropic, delta 1
HEPACAM2 HEPACAM family member 2
HIST1H2BI histone cluster 1, H2bi
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HMP19 HMP19 protein
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H')
HS6ST2 heparan sulfate 6-O-sulfotransferase 2
IDI1 isopentenyl-diphosphate delta isomerase 1
INSM2 insulinoma-associated 2
INTS4 integrator complex subunit 4
INTS6 integrator complex subunit 6
JMJD6 jumonji domain containing 6
KANK1 KN motif and ankyrin repeat domains 1
KCNIP3 Kv channel interacting protein 3, calsenilin
KCNK2 potassium channel, two pore domain subfamily K, member 2
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KIAA1644 KIAA1644
KIF3A kinesin family member 3A
KLHL35 kelch-like family member 35
KLRF1 killer cell lectin-like receptor subfamily F, member 1
KLRG1 killer cell lectin-like receptor subfamily G, member 1
KRTAP13-1 keratin associated protein 13-1
KRTAP5-11 keratin associated protein 5-11
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
LHX5 LIM homeobox 5
LIMA1 LIM domain and actin binding 1
LIMS3-LOC440895 LIMS3-LOC440895 readthrough
LOC100128573 uncharacterized LOC100128573
LOC285696 uncharacterized LOC285696
LOC389705 chromosome 4 open reading frame 27 pseudogene
LOC727896 cysteine and histidine-rich domain (CHORD) containing 1 pseudogene
LPPR1 lipid phosphate phosphatase-related protein type 1
LPPR3 lipid phosphate phosphatase-related protein type 3
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LRRTM3 leucine rich repeat transmembrane neuronal 3
LRRTM4 leucine rich repeat transmembrane neuronal 4
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1
MAGED4B melanoma antigen family D4B
MARCKS myristoylated alanine-rich protein kinase C substrate
MBD3L5 methyl-CpG binding domain protein 3-like 5
MCL1 myeloid cell leukemia 1
MCMDC2 minichromosome maintenance domain containing 2
MCTS2P malignant T cell amplified sequence 2, pseudogene
MEGF11 multiple EGF-like-domains 11
MICU1 mitochondrial calcium uptake 1
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
MRFAP1L1 Morf4 family associated protein 1-like 1
MRPL44 mitochondrial ribosomal protein L44
MRPL50 mitochondrial ribosomal protein L50
MTSS1 metastasis suppressor 1
NAGS N-acetylglutamate synthase
NAP1L6 nucleosome assembly protein 1-like 6
NKX1-2 NK1 homeobox 2
NKX2-2 NK2 homeobox 2
NLGN3 neuroligin 3
NLGN4Y neuroligin 4, Y-linked
NLRP13 NLR family, pyrin domain containing 13
NOMO3 NODAL modulator 3
NR0B1 nuclear receptor subfamily 0, group B, member 1
NSDHL NAD(P) dependent steroid dehydrogenase-like
NUP35 nucleoporin 35kDa
NUPL2 nucleoporin like 2
NXPH1 neurexophilin 1
OLIG1 oligodendrocyte transcription factor 1
OLIG2 oligodendrocyte lineage transcription factor 2
OR10A4 olfactory receptor, family 10, subfamily A, member 4
OR5B12 olfactory receptor, family 5, subfamily B, member 12
PAK7 p21 protein (Cdc42/Rac)-activated kinase 7
PANK1 pantothenate kinase 1
PCDH20 protocadherin 20
PCDHA2 protocadherin alpha 2
PCDHA6 protocadherin alpha 6
PCDHB8 protocadherin beta 8
PCDHGA7 protocadherin gamma subfamily A, 7
PCDHGA8 protocadherin gamma subfamily A, 8
PCDHGB4 protocadherin gamma subfamily B, 4
PDE4B phosphodiesterase 4B, cAMP-specific
PELI1 pellino E3 ubiquitin protein ligase 1
PELI2 pellino E3 ubiquitin protein ligase family member 2
PGRMC1 progesterone receptor membrane component 1
PHLDA1 pleckstrin homology-like domain, family A, member 1
PID1 phosphotyrosine interaction domain containing 1
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
POLR2F polymerase (RNA) II (DNA directed) polypeptide F
PP2D1 protein phosphatase 2C-like domain containing 1
PRX periaxin
RAB10 RAB10, member RAS oncogene family
RAB14 RAB14, member RAS oncogene family
RAB2A RAB2A, member RAS oncogene family
RAB31 RAB31, member RAS oncogene family
RAB33A RAB33A, member RAS oncogene family
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
RBBP7 retinoblastoma binding protein 7
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
RGMB repulsive guidance molecule family member b
RNF146 ring finger protein 146
RNF8 ring finger protein 8, E3 ubiquitin protein ligase
RRAGB Ras-related GTP binding B
RSRC2 arginine/serine-rich coiled-coil 2
RTKN rhotekin
SCARB2 scavenger receptor class B, member 2
SCARNA17 small Cajal body-specific RNA 17
SCD5 stearoyl-CoA desaturase 5
SDPR serum deprivation response
SH3BP4 SH3-domain binding protein 4
SLAIN1 SLAIN motif family, member 1
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC22A17 solute carrier family 22, member 17
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLCO4A1 solute carrier organic anion transporter family, member 4A1
SLITRK1 SLIT and NTRK-like family, member 1
SLITRK3 SLIT and NTRK-like family, member 3
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA27 small nucleolar RNA, H/ACA box 27
SNORA71B small nucleolar RNA, H/ACA box 71B
SNORA77 small nucleolar RNA, H/ACA box 77
SOX8 SRY (sex determining region Y)-box 8
SPIN2B spindlin family, member 2B
SPO11 SPO11 meiotic protein covalently bound to DSB
SPRY3 sprouty homolog 3 (Drosophila)
SPSB4 splA/ryanodine receptor domain and SOCS box containing 4
SSMEM1 serine-rich single-pass membrane protein 1
SSTR1 somatostatin receptor 1
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
SULF2 sulfatase 2
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAL2 T-cell acute lymphocytic leukemia 2
TBC1D10A TBC1 domain family, member 10A
TBC1D14 TBC1 domain family, member 14
THAP2 THAP domain containing, apoptosis associated protein 2
TMEM179 transmembrane protein 179
TMEM199 transmembrane protein 199
TMEM38B transmembrane protein 38B
TNK2 tyrosine kinase, non-receptor, 2
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
TOPAZ1 testis and ovary specific PAZ domain containing 1
TRIB2 tribbles pseudokinase 2
TSC22D3 TSC22 domain family, member 3
TTI2 TELO2 interacting protein 2
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
UBE2G1 ubiquitin-conjugating enzyme E2G 1
UBQLN3 ubiquilin 3
UNC93A unc-93 homolog A (C. elegans)
USP54 ubiquitin specific peptidase 54
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
ZC4H2 zinc finger, C4H2 domain containing
ZCCHC24 zinc finger, CCHC domain containing 24
ZDHHC22 zinc finger, DHHC-type containing 22
ZNF595 zinc finger protein 595
ZPBP zona pellucida binding protein

low expression

Symbol Name
CYB561D1 cytochrome b561 family, member D1