Brain Lower Grade Glioma_LGG_TCGA-S9-A6U6-01A-12R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

178 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A6U6-01A-12R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif, 8
ARHGAP31 Rho GTPase activating protein 31
ARMCX6 armadillo repeat containing, X-linked 6
ARMS2 age-related maculopathy susceptibility 2
ASB15 ankyrin repeat and SOCS box containing 15
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BCR breakpoint cluster region
BCYRN1 brain cytoplasmic RNA 1
BMP10 bone morphogenetic protein 10
BOC BOC cell adhesion associated, oncogene regulated
BRINP2 bone morphogenetic protein/retinoic acid inducible neural-specific 2
C12ORF71 chromosome 12 open reading frame 71
C16ORF90 chromosome 16 open reading frame 90
C1ORF220 chromosome 1 open reading frame 220
C4ORF17 chromosome 4 open reading frame 17
CACUL1 CDK2-associated, cullin domain 1
CASZ1 castor zinc finger 1
CCDC38 coiled-coil domain containing 38
CDYL chromodomain protein, Y-like
CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CLDN6 claudin 6
COLCA1 colorectal cancer associated 1
CPSF4L cleavage and polyadenylation specific factor 4-like
CSRNP1 cysteine-serine-rich nuclear protein 1
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CYP11B1 cytochrome P450, family 11, subfamily B, polypeptide 1
DAD1P1 defender against cell death 1 pseudogene 1
DDIT4 DNA-damage-inducible transcript 4
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
DEFB4A defensin, beta 4A
DGCR10 DiGeorge syndrome critical region gene 10 (non-protein coding)
DUSP9 dual specificity phosphatase 9
ESX1 ESX homeobox 1
FAM212B family with sequence similarity 212, member B
FAM57B family with sequence similarity 57, member B
FAM58A family with sequence similarity 58, member A
FAM58BP cyclin-related protein FAM58B
FAM69A family with sequence similarity 69, member A
FBXO31 F-box protein 31
FDFT1 farnesyl-diphosphate farnesyltransferase 1
FIBIN fin bud initiation factor homolog (zebrafish)
FRAT1 frequently rearranged in advanced T-cell lymphomas 1
FRAT2 frequently rearranged in advanced T-cell lymphomas 2
GDF10 growth differentiation factor 10
GFRAL GDNF family receptor alpha like
GJB4 gap junction protein, beta 4, 30.3kDa
GJB5 gap junction protein, beta 5, 31.1kDa
GML glycosylphosphatidylinositol anchored molecule like
GNAZ guanine nucleotide binding protein (G protein), alpha z polypeptide
GOLGA8EP golgin A8 family, member E, pseudogene
GPR153 G protein-coupled receptor 153
GRIK5 glutamate receptor, ionotropic, kainate 5
GSTM2P1 glutathione S-transferase mu 2 (muscle) pseudogene 1
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene)
GYPE glycophorin E (MNS blood group)
HMGB3P1 high mobility group box 3 pseudogene 1
IFFO2 intermediate filament family orphan 2
IFNA8 interferon, alpha 8
IFNL3 interferon, lambda 3
IGLON5 IgLON family member 5
IL19 interleukin 19
IL20 interleukin 20
INSC inscuteable homolog (Drosophila)
INTS10 integrator complex subunit 10
ITPK1-AS1 ITPK1 antisense RNA 1
JARID2 jumonji, AT rich interactive domain 2
KCNK4 potassium channel, two pore domain subfamily K, member 4
KRT24 keratin 24, type I
KRT37 keratin 37, type I
KRT5 keratin 5, type II
KRTAP10-4 keratin associated protein 10-4
KRTAP4-3 keratin associated protein 4-3
KRTAP5-6 keratin associated protein 5-6
LANCL3 LanC lantibiotic synthetase component C-like 3 (bacterial)
LIFR leukemia inhibitory factor receptor alpha
LOC494141 solute carrier family 25, member 51 pseudogene
MAGED1 melanoma antigen family D1
MBL2 mannose-binding lectin (protein C) 2, soluble
MROH2B maestro heat-like repeat family member 2B
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
NANOS2 nanos homolog 2 (Drosophila)
NT5DC3 5'-nucleotidase domain containing 3
NUDT10 nudix (nucleoside diphosphate linked moiety X)-type motif 10
NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 11
NUTM2F NUT family member 2F
ODF3 outer dense fiber of sperm tails 3
OR1M1 olfactory receptor, family 1, subfamily M, member 1
OR2V2 olfactory receptor, family 2, subfamily V, member 2
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR51I1 olfactory receptor, family 51, subfamily I, member 1
OR51S1 olfactory receptor, family 51, subfamily S, member 1
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OR8J1 olfactory receptor, family 8, subfamily J, member 1
OR8U1 olfactory receptor, family 8, subfamily U, member 1
PAX8 paired box 8
PCDH15 protocadherin-related 15
PCDHGA1 protocadherin gamma subfamily A, 1
PCDHGA6 protocadherin gamma subfamily A, 6
PCTP phosphatidylcholine transfer protein
PDGFB platelet-derived growth factor beta polypeptide
PER1 period circadian clock 1
PFN3 profilin 3
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PLAC9 placenta-specific 9
PP2D1 protein phosphatase 2C-like domain containing 1
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B
PRB1 proline-rich protein BstNI subfamily 1
PRSS27 protease, serine 27
PTCH1 patched 1
PTCHD2 patched domain containing 2
RAB20 RAB20, member RAS oncogene family
RASGRF1 Ras protein-specific guanine nucleotide-releasing factor 1
RBBP7 retinoblastoma binding protein 7
REC114 REC114 meiotic recombination protein
RNF150 ring finger protein 150
RNF222 ring finger protein 222
RNU6ATAC RNA, U6atac small nuclear (U12-dependent splicing)
RPL13AP6 ribosomal protein L13a pseudogene 6
SAG S-antigen; retina and pineal gland (arrestin)
SCARNA15 small Cajal body-specific RNA 15
SEMA5B sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
SGMS1 sphingomyelin synthase 1
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2
SLC35G5 solute carrier family 35, member G5
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA61 small nucleolar RNA, H/ACA box 61
SNORA76C small nucleolar RNA, H/ACA box 76C
SNORD89 small nucleolar RNA, C/D box 89
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SQLE squalene epoxidase
SSTR5 somatostatin receptor 5
SSX4 synovial sarcoma, X breakpoint 4
STK25 serine/threonine kinase 25
TAS2R7 taste receptor, type 2, member 7
TBC1D3F TBC1 domain family, member 3F
TEX30 testis expressed 30
TGM6 transglutaminase 6
TIPARP TCDD-inducible poly(ADP-ribose) polymerase
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
TMEM100 transmembrane protein 100
TMEM82 transmembrane protein 82
TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene
TMSB4Y thymosin beta 4, Y-linked
TRIM62 tripartite motif containing 62
TSC22D1 TSC22 domain family, member 1
TTC27 tetratricopeptide repeat domain 27
TTLL8 tubulin tyrosine ligase-like family member 8
TTTY15 testis-specific transcript, Y-linked 15 (non-protein coding)
TTTY1B testis-specific transcript, Y-linked 1B (non-protein coding)
TTTY2 testis-specific transcript, Y-linked 2 (non-protein coding)
UBAP2 ubiquitin associated protein 2
UGT1A1 UDP glucuronosyltransferase 1 family, polypeptide A1
USP3 ubiquitin specific peptidase 3
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
VN1R10P vomeronasal 1 receptor 10 pseudogene
XIRP1 xin actin binding repeat containing 1
ZBED1 zinc finger, BED-type containing 1
ZBTB16 zinc finger and BTB domain containing 16
ZFY zinc finger protein, Y-linked
ZNF189 zinc finger protein 189
ZNF282 zinc finger protein 282
ZNF425 zinc finger protein 425
ZNF584 zinc finger protein 584
ZNF671 zinc finger protein 671
ZNF703 zinc finger protein 703
ZNF705D zinc finger protein 705D
ZNRF4 zinc and ring finger 4
ZPBP2 zona pellucida binding protein 2
ZSCAN1 zinc finger and SCAN domain containing 1
ZSWIM6 zinc finger, SWIM-type containing 6

low expression

Symbol Name
C2ORF47 chromosome 2 open reading frame 47
COPG2 coatomer protein complex, subunit gamma 2
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
ORC2 origin recognition complex, subunit 2
WDR12 WD repeat domain 12