Brain Lower Grade Glioma_LGG_TCGA-S9-A6U2-01A-21R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

357 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A6U2-01A-21R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AAA1 aortic aneurysm, familial abdominal 1
AARS alanyl-tRNA synthetase
ABLIM3 actin binding LIM protein family, member 3
ACADL acyl-CoA dehydrogenase, long chain
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
ACOT2 acyl-CoA thioesterase 2
ACSL6 acyl-CoA synthetase long-chain family member 6
ADGRA3 adhesion G protein-coupled receptor A3
ADGRV1 adhesion G protein-coupled receptor V1
AFAP1L2 actin filament associated protein 1-like 2
AFF2 AF4/FMR2 family, member 2
ALDH1L2 aldehyde dehydrogenase 1 family, member L2
ALDH6A1 aldehyde dehydrogenase 6 family, member A1
ALG10 ALG10, alpha-1,2-glucosyltransferase
ANKFY1 ankyrin repeat and FYVE domain containing 1
ANKRD31 ankyrin repeat domain 31
ANOS1 anosmin 1
APCDD1 adenomatosis polyposis coli down-regulated 1
APLNR apelin receptor
AQP4-AS1 AQP4 antisense RNA 1
ARHGAP36 Rho GTPase activating protein 36
ARL13A ADP-ribosylation factor-like 13A
ASCC3 activating signal cointegrator 1 complex subunit 3
ATG2A autophagy related 2A
ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)
ATRN attractin
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
BARX2 BARX homeobox 2
BCL2 B-cell CLL/lymphoma 2
BDNF-AS BDNF antisense RNA
BHLHA15 basic helix-loop-helix family, member a15
BRI3BP BRI3 binding protein
BROX BRO1 domain and CAAX motif containing
C10ORF62 chromosome 10 open reading frame 62
C14ORF105 chromosome 14 open reading frame 105
C1QTNF1 C1q and tumor necrosis factor related protein 1
C2ORF61 chromosome 2 open reading frame 61
C2ORF72 chromosome 2 open reading frame 72
C4ORF29 chromosome 4 open reading frame 29
CALN1 calneuron 1
CANX calnexin
CARD18 caspase recruitment domain family, member 18
CCBE1 collagen and calcium binding EGF domains 1
CCDC157 coiled-coil domain containing 157
CCDC79 coiled-coil domain containing 79
CD177 CD177 molecule
CD38 CD38 molecule
CDC14B cell division cycle 14B
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CEL carboxyl ester lipase
CEP68 centrosomal protein 68kDa
CEP85L centrosomal protein 85kDa-like
CERKL ceramide kinase-like
CHP2 calcineurin-like EF-hand protein 2
CHST1 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
CMTM4 CKLF-like MARVEL transmembrane domain containing 4
CNTD1 cyclin N-terminal domain containing 1
CTSO cathepsin O
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1
CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1
DAAM2 dishevelled associated activator of morphogenesis 2
DCAF5 DDB1 and CUL4 associated factor 5
DCHS2 dachsous cadherin-related 2
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DENND1B DENN/MADD domain containing 1B
DHCR7 7-dehydrocholesterol reductase
DISC1 disrupted in schizophrenia 1
DNAH7 dynein, axonemal, heavy chain 7
DNMBP-AS1 DNMBP antisense RNA 1
DPPA5 developmental pluripotency associated 5
DRAM1 DNA-damage regulated autophagy modulator 1
DTNA dystrobrevin, alpha
DTWD2 DTW domain containing 2
DUPD1 dual specificity phosphatase and pro isomerase domain containing 1
EDA2R ectodysplasin A2 receptor
EFCAB11 EF-hand calcium binding domain 11
EGLN1 egl-9 family hypoxia-inducible factor 1
EHD1 EH-domain containing 1
ELOVL5 ELOVL fatty acid elongase 5
EML5 echinoderm microtubule associated protein like 5
ERN2 endoplasmic reticulum to nucleus signaling 2
EXOC6B exocyst complex component 6B
F5 coagulation factor V (proaccelerin, labile factor)
FAM157A family with sequence similarity 157, member A
FAM168A family with sequence similarity 168, member A
FAM196B family with sequence similarity 196, member B
FAM198B family with sequence similarity 198, member B
FAM199X family with sequence similarity 199, X-linked
FAM46D family with sequence similarity 46, member D
FASN fatty acid synthase
FDXR ferredoxin reductase
FER fer (fps/fes related) tyrosine kinase
FGFBP3 fibroblast growth factor binding protein 3
FICD FIC domain containing
FITM2 fat storage-inducing transmembrane protein 2
FKTN fukutin
FLJ16779 uncharacterized LOC100192386
FLVCR1 feline leukemia virus subgroup C cellular receptor 1
FMO2 flavin containing monooxygenase 2 (non-functional)
FMR1NB fragile X mental retardation 1 neighbor
FOXN3 forkhead box N3
FSTL5 follistatin-like 5
FUT9 fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
G6PC glucose-6-phosphatase, catalytic subunit
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GALC galactosylceramidase
GAN gigaxonin
GATSL2 GATS protein-like 2
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GCSH glycine cleavage system protein H (aminomethyl carrier)
GDPD1 glycerophosphodiester phosphodiesterase domain containing 1
GFRAL GDNF family receptor alpha like
GNAL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
GNPDA2 glucosamine-6-phosphate deaminase 2
GPC6 glypican 6
GPR148 G protein-coupled receptor 148
GPR161 G protein-coupled receptor 161
GPR27 G protein-coupled receptor 27
GPR75 G protein-coupled receptor 75
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
GTSF1L gametocyte specific factor 1-like
GUCY1A3 guanylate cyclase 1, soluble, alpha 3
HERC2P4 hect domain and RLD 2 pseudogene 4
HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HPSE2 heparanase 2 (inactive)
IFITM5 interferon induced transmembrane protein 5
IL17RD interleukin 17 receptor D
IL20 interleukin 20
IL24 interleukin 24
ILDR2 immunoglobulin-like domain containing receptor 2
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa
INVS inversin
IPMK inositol polyphosphate multikinase
IRAK1BP1 interleukin-1 receptor-associated kinase 1 binding protein 1
IRX1 iroquois homeobox 1
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2
KCNB1 potassium channel, voltage gated Shab related subfamily B, member 1
KCNJ16 potassium channel, inwardly rectifying subfamily J, member 16
KCTD21 potassium channel tetramerization domain containing 21
KIAA1033 KIAA1033
KIAA1143 KIAA1143
KIAA1161 KIAA1161
KIAA2018 KIAA2018
KIF26B kinesin family member 26B
KLHL36 kelch-like family member 36
KLHL5 kelch-like family member 5
KPNA1 karyopherin alpha 1 (importin alpha 5)
KRTAP19-8 keratin associated protein 19-8
LACE1 lactation elevated 1
LAMA1 laminin, alpha 1
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LHFPL1 lipoma HMGIC fusion partner-like 1
LIN7A lin-7 homolog A (C. elegans)
LINC00161 long intergenic non-protein coding RNA 161
LINC01550 long intergenic non-protein coding RNA 1550
LOC100128573 uncharacterized LOC100128573
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
LRRC16A leucine rich repeat containing 16A
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene
LRRN1 leucine rich repeat neuronal 1
LRRTM3 leucine rich repeat transmembrane neuronal 3
MCC mutated in colorectal cancers
MESTIT1 MEST intronic transcript 1, antisense RNA
MGAM maltase-glucoamylase
MGAT4C MGAT4 family, member C
MIR99AHG mir-99a-let-7c cluster host gene
MMD2 monocyte to macrophage differentiation-associated 2
MON1B MON1 secretory trafficking family member B
MSMO1 methylsterol monooxygenase 1
MSX2P1 msh homeobox 2 pseudogene 1
NACC2 NACC family member 2, BEN and BTB (POZ) domain containing
NBEAL1 neurobeachin-like 1
NHSL1 NHS-like 1
NKX1-2 NK1 homeobox 2
NOP9 NOP9 nucleolar protein
NPSR1 neuropeptide S receptor 1
NRP2 neuropilin 2
NT5C1A 5'-nucleotidase, cytosolic IA
NTN1 netrin 1
NUDT12 nudix (nucleoside diphosphate linked moiety X)-type motif 12
NXF4 nuclear RNA export factor 4 pseudogene
OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1L4 olfactory receptor, family 1, subfamily L, member 4
OR2T6 olfactory receptor, family 2, subfamily T, member 6
OR51G2 olfactory receptor, family 51, subfamily G, member 2
OR52B6 olfactory receptor, family 52, subfamily B, member 6
OR5AK2 olfactory receptor, family 5, subfamily AK, member 2
P2RY1 purinergic receptor P2Y, G-protein coupled, 1
PANK1 pantothenate kinase 1
PATE4 prostate and testis expressed 4
PBLD phenazine biosynthesis-like protein domain containing
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
PCDH10 protocadherin 10
PCDH17 protocadherin 17
PCDHA11 protocadherin alpha 11
PCDHA2 protocadherin alpha 2
PCDHA9 protocadherin alpha 9
PCDHB2 protocadherin beta 2
PCDHGA7 protocadherin gamma subfamily A, 7
PCDHGB2 protocadherin gamma subfamily B, 2
PCDHGB7 protocadherin gamma subfamily B, 7
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2
PDZD8 PDZ domain containing 8
PGM3 phosphoglucomutase 3
PHAX phosphorylated adaptor for RNA export
PIKFYVE phosphoinositide kinase, FYVE finger containing
PIWIL3 piwi-like RNA-mediated gene silencing 3
PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
PLXNB2 plexin B2
PNPLA3 patatin-like phospholipase domain containing 3
PON1 paraoxonase 1
PON3 paraoxonase 3
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PREX2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
PRINS psoriasis associated non-protein coding RNA induced by stress
PRSS42 protease, serine, 42
PTCHD4 patched domain containing 4
PTPRA protein tyrosine phosphatase, receptor type, A
RAB40A RAB40A, member RAS oncogene family
RBSN rabenosyn, RAB effector
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
RFXAP regulatory factor X-associated protein
RGPD1 RANBP2-like and GRIP domain containing 1
RGPD8 RANBP2-like and GRIP domain containing 8
RGR retinal G protein coupled receptor
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RRM2B ribonucleotide reductase M2 B (TP53 inducible)
SAMD4A sterile alpha motif domain containing 4A
SAMD8 sterile alpha motif domain containing 8
SASH1 SAM and SH3 domain containing 1
SC5D sterol-C5-desaturase
SCARNA18 small Cajal body-specific RNA 18
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SCN11A sodium channel, voltage gated, type XI alpha subunit
SERHL serine hydrolase-like (pseudogene)
SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1
SF3A1 splicing factor 3a, subunit 1, 120kDa
SH2B2 SH2B adaptor protein 2
SHC3 SHC (Src homology 2 domain containing) transforming protein 3
SHISA6 shisa family member 6
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC22A2 solute carrier family 22 (organic cation transporter), member 2
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLC22A8 solute carrier family 22 (organic anion transporter), member 8
SLC38A7 solute carrier family 38, member 7
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4
SLC5A5 solute carrier family 5 (sodium/iodide cotransporter), member 5
SLC6A13 solute carrier family 6 (neurotransmitter transporter), member 13
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SLITRK2 SLIT and NTRK-like family, member 2
SLITRK3 SLIT and NTRK-like family, member 3
SMAD9 SMAD family member 9
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA40 small nucleolar RNA, H/ACA box 40
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA72 small nucleolar RNA, H/ACA box 72
SNORA77 small nucleolar RNA, H/ACA box 77
SNX29 sorting nexin 29
SNX31 sorting nexin 31
SPATA3 spermatogenesis associated 3
SPDYE4 speedy/RINGO cell cycle regulator family member E4
SPINK9 serine peptidase inhibitor, Kazal type 9
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
STARD4 StAR-related lipid transfer (START) domain containing 4
STARD6 StAR-related lipid transfer (START) domain containing 6
STX19 syntaxin 19
SULF2 sulfatase 2
TADA2A transcriptional adaptor 2A
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TAS2R3 taste receptor, type 2, member 3
TAS2R9 taste receptor, type 2, member 9
TCAIM T cell activation inhibitor, mitochondrial
TCEANC transcription elongation factor A (SII) N-terminal and central domain containing
THSD7A thrombospondin, type I, domain containing 7A
TIGIT T cell immunoreceptor with Ig and ITIM domains
TLX1NB TLX1 neighbor
TM4SF20 transmembrane 4 L six family member 20
TMED10P1 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1
TMEM170A transmembrane protein 170A
TMEM30B transmembrane protein 30B
TMEM38B transmembrane protein 38B
TMEM65 transmembrane protein 65
TMEM89 transmembrane protein 89
TMEM8B transmembrane protein 8B
TNR tenascin R
TPPP2 tubulin polymerization-promoting protein family member 2
TRAF3 TNF receptor-associated factor 3
TRPC3 transient receptor potential cation channel, subfamily C, member 3
TSPAN11 tetraspanin 11
TSPO2 translocator protein 2
TSPY26P testis specific protein, Y-linked 26, pseudogene
TSSK4 testis-specific serine kinase 4
TTLL8 tubulin tyrosine ligase-like family member 8
TXNRD3NB thioredoxin reductase 3 neighbor
UGT3A2 UDP glycosyltransferase 3 family, polypeptide A2
UNC93A unc-93 homolog A (C. elegans)
USP17L2 ubiquitin specific peptidase 17-like family member 2
USP38 ubiquitin specific peptidase 38
USP50 ubiquitin specific peptidase 50
USP9X ubiquitin specific peptidase 9, X-linked
VPREB1 pre-B lymphocyte 1
WASF3 WAS protein family, member 3
WDFY3-AS2 WDFY3 antisense RNA 2
WDR31 WD repeat domain 31
XG Xg blood group
XKR3 XK, Kell blood group complex subunit-related family, member 3
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial
ZBTB37 zinc finger and BTB domain containing 37
ZFX zinc finger protein, X-linked
ZMAT3 zinc finger, matrin-type 3
ZNF257 zinc finger protein 257
ZNF385A zinc finger protein 385A
ZNF391 zinc finger protein 391
ZNF676 zinc finger protein 676
ZNF843 zinc finger protein 843
ZNF846 zinc finger protein 846
ZNF99 zinc finger protein 99
ZNRF4 zinc and ring finger 4
ZSCAN23 zinc finger and SCAN domain containing 23
ZXDA zinc finger, X-linked, duplicated A

low expression

Symbol Name
AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
COPS2 COP9 signalosome subunit 2
EIF3J eukaryotic translation initiation factor 3, subunit J
EMC4 ER membrane protein complex subunit 4
FAM103A1 family with sequence similarity 103, member A1
FAM219B family with sequence similarity 219, member B
GTF2A2 general transcription factor IIA, 2, 12kDa
IPW imprinted in Prader-Willi syndrome (non-protein coding)
MFAP1 microfibrillar-associated protein 1
MORF4L1 mortality factor 4 like 1
MTFMT mitochondrial methionyl-tRNA formyltransferase
NDNL2 necdin-like 2
OAZ2 ornithine decarboxylase antizyme 2
PARP16 poly (ADP-ribose) polymerase family, member 16
PDCD7 programmed cell death 7
RAB11A RAB11A, member RAS oncogene family
RCN2 reticulocalbin 2, EF-hand calcium binding domain
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein)
TM2D3 TM2 domain containing 3
TMEM62 transmembrane protein 62
VPS33B vacuolar protein sorting 33 homolog B (yeast)
VPS39 vacuolar protein sorting 39 homolog (S. cerevisiae)
VWA9 von Willebrand factor A domain containing 9