Brain Lower Grade Glioma_LGG_TCGA-S9-A6TX-01A-21R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

283 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A6TX-01A-21R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS2 alanyl-tRNA synthetase 2, mitochondrial
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ACBD4 acyl-CoA binding domain containing 4
ACSL6 acyl-CoA synthetase long-chain family member 6
ACSM2B acyl-CoA synthetase medium-chain family member 2B
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
AKAP17A A kinase (PRKA) anchor protein 17A
ALPL alkaline phosphatase, liver/bone/kidney
AMER2 APC membrane recruitment protein 2
ANKRD13B ankyrin repeat domain 13B
ANKRD30A ankyrin repeat domain 30A
ANO8 anoctamin 8
ANP32C acidic (leucine-rich) nuclear phosphoprotein 32 family, member C
AP3D1 adaptor-related protein complex 3, delta 1 subunit
ARL4D ADP-ribosylation factor-like 4D
ARRDC2 arrestin domain containing 2
ATXN2L ataxin 2-like
ATXN3L ataxin 3-like
BARHL1 BarH-like homeobox 1
BLK BLK proto-oncogene, Src family tyrosine kinase
BMP6 bone morphogenetic protein 6
BTNL9 butyrophilin-like 9
C10ORF62 chromosome 10 open reading frame 62
C10ORF95 chromosome 10 open reading frame 95
C14ORF177 chromosome 14 open reading frame 177
C15ORF39 chromosome 15 open reading frame 39
C15ORF59 chromosome 15 open reading frame 59
C16ORF86 chromosome 16 open reading frame 86
C19ORF45 chromosome 19 open reading frame 45
CA12 carbonic anhydrase XII
CASKIN2 CASK interacting protein 2
CBS cystathionine-beta-synthase
CCBL1 cysteine conjugate-beta lyase, cytoplasmic
CCDC154 coiled-coil domain containing 154
CCDC174 coiled-coil domain containing 174
CCDC38 coiled-coil domain containing 38
CCNI2 cyclin I family, member 2
CDC25B cell division cycle 25B
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding)
CELF6 CUGBP, Elav-like family member 6
CHGB chromogranin B
CLEC4F C-type lectin domain family 4, member F
CLVS1 clavesin 1
CMKLR1 chemerin chemokine-like receptor 1
CORO7 coronin 7
CRTAC1 cartilage acidic protein 1
CRTC2 CREB regulated transcription coactivator 2
CRY2 cryptochrome circadian clock 2
CTNNBL1 catenin, beta like 1
D2HGDH D-2-hydroxyglutarate dehydrogenase
DAPK2 death-associated protein kinase 2
DDO D-aspartate oxidase
DEF8 differentially expressed in FDCP 8 homolog (mouse)
DFNB31 deafness, autosomal recessive 31
DISP2 dispatched homolog 2 (Drosophila)
DNM2 dynamin 2
DOK5 docking protein 5
DPF2 D4, zinc and double PHD fingers family 2
EHMT2 euchromatic histone-lysine N-methyltransferase 2
ELMO1 engulfment and cell motility 1
EPOR erythropoietin receptor
EPS8L3 EPS8-like 3
ESRRA estrogen-related receptor alpha
EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit
FABP6 fatty acid binding protein 6, ileal
FAM110A family with sequence similarity 110, member A
FAM149A family with sequence similarity 149, member A
FAM150B family with sequence similarity 150, member B
FAM201A family with sequence similarity 201, member A
FAM221B family with sequence similarity 221, member B
FAM57B family with sequence similarity 57, member B
FAM89A family with sequence similarity 89, member A
FBRS fibrosin
FLJ23867 uncharacterized protein FLJ23867
FLYWCH1 FLYWCH-type zinc finger 1
FRA10AC1 fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
FXR2 fragile X mental retardation, autosomal homolog 2
GALR3 galanin receptor 3
GALT galactose-1-phosphate uridylyltransferase
GAS2L1 growth arrest-specific 2 like 1
GATSL3 GATS protein-like 3
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GLIS2 GLIS family zinc finger 2
GLRA1 glycine receptor, alpha 1
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
GPR6 G protein-coupled receptor 6
GPR89B G protein-coupled receptor 89B
GRIP2 glutamate receptor interacting protein 2
GRIPAP1 GRIP1 associated protein 1
GTF2F1 general transcription factor IIF, polypeptide 1, 74kDa
HDAC6 histone deacetylase 6
HIP1R huntingtin interacting protein 1 related
HIRIP3 HIRA interacting protein 3
HMGN5 high mobility group nucleosome binding domain 5
HNF1A-AS1 HNF1A antisense RNA 1
HSF2BP heat shock transcription factor 2 binding protein
HSF4 heat shock transcription factor 4
HSPB9 heat shock protein, alpha-crystallin-related, B9
IFNA14 interferon, alpha 14
IGSF8 immunoglobulin superfamily, member 8
IK IK cytokine, down-regulator of HLA II
IL37 interleukin 37
ILK integrin-linked kinase
ING2 inhibitor of growth family, member 2
INSL6 insulin-like 6
INTS4P1 integrator complex subunit 4 pseudogene 1
IP6K3 inositol hexakisphosphate kinase 3
IRF2BP2 interferon regulatory factor 2 binding protein 2
JPH2 junctophilin 2
KANK3 KN motif and ankyrin repeat domains 3
KAT2A K(lysine) acetyltransferase 2A
KCNAB3 potassium channel, voltage gated subfamily A regulatory beta subunit 3
KCNIP2 Kv channel interacting protein 2
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNK3 potassium channel, two pore domain subfamily K, member 3
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3
KIAA0895L KIAA0895-like
KLF1 Kruppel-like factor 1 (erythroid)
KLF15 Kruppel-like factor 15
KRT73 keratin 73, type II
KRTAP5-1 keratin associated protein 5-1
L1CAM L1 cell adhesion molecule
LCE5A late cornified envelope 5A
LCNL1 lipocalin-like 1
LINC00052 long intergenic non-protein coding RNA 52
LINC00173 long intergenic non-protein coding RNA 173
LINC00313 long intergenic non-protein coding RNA 313
LINC00593 long intergenic non-protein coding RNA 593
LINC01599 long intergenic non-protein coding RNA 1599
LINGO3 leucine rich repeat and Ig domain containing 3
LOC100288778 WAS protein family homolog 1 pseudogene
LOC145837
LOC650293 seven transmembrane helix receptor
LOC727924 uncharacterized LOC727924
LRRC16B leucine rich repeat containing 16B
MAMDC4 MAM domain containing 4
MARCH4 membrane-associated ring finger (C3HC4) 4, E3 ubiquitin protein ligase
MGRN1 mahogunin ring finger 1, E3 ubiquitin protein ligase
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MLLT4-AS1 MLLT4 antisense RNA 1 (head to head)
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae)
MST1 macrophage stimulating 1
MSTO2P misato family member 2, pseudogene
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
NBEAP1 neurobeachin pseudogene 1
NEK3 NIMA-related kinase 3
NELFA negative elongation factor complex member A
NEUROD1 neuronal differentiation 1
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NRG2 neuregulin 2
NRXN2 neurexin 2
NXPH3 neurexophilin 3
OR10A7 olfactory receptor, family 10, subfamily A, member 7
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene
OR51B5 olfactory receptor, family 51, subfamily B, member 5
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OTUD5 OTU deubiquitinase 5
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PBX2 pre-B-cell leukemia homeobox 2
PCDHGA10 protocadherin gamma subfamily A, 10
PCSK4 proprotein convertase subtilisin/kexin type 4
PECR peroxisomal trans-2-enoyl-CoA reductase
PELP1 proline, glutamate and leucine rich protein 1
PGF placental growth factor
PHF1 PHD finger protein 1
PHF21B PHD finger protein 21B
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific)
PLCD4 phospholipase C, delta 4
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
POM121L1P POM121 transmembrane nucleoporin-like 1, pseudogene
POM121L8P POM121 transmembrane nucleoporin-like 8 pseudogene
POM121L9P POM121 transmembrane nucleoporin-like 9, pseudogene
POTEC POTE ankyrin domain family, member C
POU3F3 POU class 3 homeobox 3
PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2)
PPP1R14C protein phosphatase 1, regulatory (inhibitor) subunit 14C
PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A
PROCA1 protein interacting with cyclin A1
PRPF40B PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)
PRPH peripherin
PRR14 proline rich 14
PRR21 proline rich 21
PRR22 proline rich 22
PRR23B proline rich 23B
PRSS42 protease, serine, 42
PTPN23 protein tyrosine phosphatase, non-receptor type 23
PYGB phosphorylase, glycogen; brain
QPRT quinolinate phosphoribosyltransferase
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RASD2 RASD family, member 2
RASGEF1C RasGEF domain family, member 1C
RGL2 ral guanine nucleotide dissociation stimulator-like 2
RGL3 ral guanine nucleotide dissociation stimulator-like 3
RILPL1 Rab interacting lysosomal protein-like 1
RMND5B required for meiotic nuclear division 5 homolog B (S. cerevisiae)
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RRP8 ribosomal RNA processing 8, methyltransferase, homolog (yeast)
RSRC2 arginine/serine-rich coiled-coil 2
RTN4RL2 reticulon 4 receptor-like 2
SAFB scaffold attachment factor B
SCARA5 scavenger receptor class A, member 5
SCLY selenocysteine lyase
SCRT1 scratch family zinc finger 1
SCRT2 scratch family zinc finger 2
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SEPT8 septin 8
SF3A1 splicing factor 3a, subunit 1, 120kDa
SF3A2 splicing factor 3a, subunit 2, 66kDa
SF3B2 splicing factor 3b, subunit 2, 145kDa
SH2B1 SH2B adaptor protein 1
SH2D6 SH2 domain containing 6
SLC39A5 solute carrier family 39 (zinc transporter), member 5
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SLIT1 slit homolog 1 (Drosophila)
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SNORA74B small nucleolar RNA, H/ACA box 74B
SNW1 SNW domain containing 1
SRCIN1 SRC kinase signaling inhibitor 1
SRRM3 serine/arginine repetitive matrix 3
SSPO SCO-spondin
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STARD5 StAR-related lipid transfer (START) domain containing 5
STX4 syntaxin 4
TAL2 T-cell acute lymphocytic leukemia 2
TAOK2 TAO kinase 2
TAS2R8 taste receptor, type 2, member 8
TBC1D10A TBC1 domain family, member 10A
TBC1D2 TBC1 domain family, member 2
TBC1D3P1-DHX40P1 TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
TBX22 T-box 22
TBX6 T-box 6
TCEAL3 transcription elongation factor A (SII)-like 3
TCEAL4 transcription elongation factor A (SII)-like 4
TEX19 testis expressed 19
TGM6 transglutaminase 6
THSD4 thrombospondin, type I, domain containing 4
TINAGL1 tubulointerstitial nephritis antigen-like 1
TMC3 transmembrane channel-like 3
TMEM120B transmembrane protein 120B
TMEM132E transmembrane protein 132E
TMEM151B transmembrane protein 151B
TMEM204 transmembrane protein 204
TNK2 tyrosine kinase, non-receptor, 2
TNKS1BP1 tankyrase 1 binding protein 1, 182kDa
TPCN1 two pore segment channel 1
TRAPPC9 trafficking protein particle complex 9
TRIM67 tripartite motif containing 67
TSSK6 testis-specific serine kinase 6
VSX2 visual system homeobox 2
VWC2L von Willebrand factor C domain containing protein 2-like
WSCD2 WSC domain containing 2
WWP2 WW domain containing E3 ubiquitin protein ligase 2
XAGE3 X antigen family, member 3
ZBTB47 zinc finger and BTB domain containing 47
ZC3H18 zinc finger CCCH-type containing 18
ZDHHC22 zinc finger, DHHC-type containing 22
ZNF219 zinc finger protein 219
ZNF330 zinc finger protein 330
ZNF423 zinc finger protein 423
ZNF513 zinc finger protein 513

low expression

Symbol Name
ADNP2 ADNP homeobox 2
C2ORF42 chromosome 2 open reading frame 42
CHMP3 charged multivesicular body protein 3
ELAC1 elaC ribonuclease Z 1
ELP2 elongator acetyltransferase complex subunit 2
FASTKD2 FAST kinase domains 2
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
HDHD2 haloacid dehalogenase-like hydrolase domain containing 2
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2
RBM45 RNA binding motif protein 45
SCYL3 SCY1-like 3 (S. cerevisiae)
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
TMX3 thioredoxin-related transmembrane protein 3
UBLCP1 ubiquitin-like domain containing CTD phosphatase 1
ZNF271P zinc finger protein 271, pseudogene