Brain Lower Grade Glioma_LGG_TCGA-S9-A6TS-01A-12R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

212 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-S9-A6TS-01A-12R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAD8 acyl-CoA dehydrogenase family, member 8
ACTL7A actin-like 7A
ADCY2 adenylate cyclase 2 (brain)
ADGRG3 adhesion G protein-coupled receptor G3
ANKDD1A ankyrin repeat and death domain containing 1A
AP2A1 adaptor-related protein complex 2, alpha 1 subunit
APOE apolipoprotein E
ARFGAP1 ADP-ribosylation factor GTPase activating protein 1
ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
ATPAF2 ATP synthase mitochondrial F1 complex assembly factor 2
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide
C12ORF73 chromosome 12 open reading frame 73
C1ORF105 chromosome 1 open reading frame 105
C1ORF61 chromosome 1 open reading frame 61
C3ORF49 chromosome 3 open reading frame 49
C4ORF26 chromosome 4 open reading frame 26
C7ORF66 chromosome 7 open reading frame 66
CATSPER4 cation channel, sperm associated 4
CATSPERG catsper channel auxiliary subunit gamma
CBWD3 COBW domain containing 3
CCDC106 coiled-coil domain containing 106
CCDC183 coiled-coil domain containing 183
CDCP2 CUB domain containing protein 2
CHPF chondroitin polymerizing factor
CLPTM1 cleft lip and palate associated transmembrane protein 1
CLUH clustered mitochondria (cluA/CLU1) homolog
CNBD1 cyclic nucleotide binding domain containing 1
COX7B2 cytochrome c oxidase subunit VIIb2
CPT1C carnitine palmitoyltransferase 1C
CPT2 carnitine palmitoyltransferase 2
CRYBB3 crystallin, beta B3
CSNK1D casein kinase 1, delta
CSPG4P2Y chondroitin sulfate proteoglycan 4 pseudogene 2, Y-linked
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
DCST1 DC-STAMP domain containing 1
DCST2 DC-STAMP domain containing 2
DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
DGAT2L6 diacylglycerol O-acyltransferase 2-like 6
DGKA diacylglycerol kinase, alpha 80kDa
DPRXP4 divergent-paired related homeobox pseudogene 4
ECH1 enoyl CoA hydratase 1, peroxisomal
EFNA1 ephrin-A1
EFNA3 ephrin-A3
EML3 echinoderm microtubule associated protein like 3
ESRG embryonic stem cell related (non-protein coding)
EVPLL envoplakin-like
FAM95B1 family with sequence similarity 95, member B1
FBXO46 F-box protein 46
FGF17 fibroblast growth factor 17
FIG4 FIG4 phosphoinositide 5-phosphatase
FITM1 fat storage-inducing transmembrane protein 1
FLJ42393 uncharacterized LOC401105
FUT2 fucosyltransferase 2 (secretor status included)
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
GALR3 galanin receptor 3
GOLGA6C golgin A6 family, member C
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2
GPX3 glutathione peroxidase 3
GRAPL GRB2-related adaptor protein-like
GUCA1B guanylate cyclase activator 1B (retina)
HBQ1 hemoglobin, theta 1
HMGA1 high mobility group AT-hook 1
HOXB5 homeobox B5
HOXB6 homeobox B6
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
IFITM5 interferon induced transmembrane protein 5
IGFALS insulin-like growth factor binding protein, acid labile subunit
INAFM1 InaF-motif containing 1
INPPL1 inositol polyphosphate phosphatase-like 1
IRX1 iroquois homeobox 1
IRX2 iroquois homeobox 2
IZUMO1R IZUMO1 receptor, JUNO
KCNG2 potassium channel, voltage gated modifier subfamily G, member 2
KCTD6 potassium channel tetramerization domain containing 6
KHDC3L KH domain containing 3-like, subcortical maternal complex member
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KRTAP10-6 keratin associated protein 10-6
KRTAP10-7 keratin associated protein 10-7
KRTAP19-8 keratin associated protein 19-8
LAMB2P1 laminin, beta 2 pseudogene 1
LCNL1 lipocalin-like 1
LINC00158 long intergenic non-protein coding RNA 158
LINC00515 long intergenic non-protein coding RNA 515
LIPT1 lipoyltransferase 1
LOC100128573 uncharacterized LOC100128573
LOC100129055 cyclin Y-like 1 pseudogene
LOC100132831 A20-binding inhibitor of NF-kappaB activation 2 pseudogene
LOC440461 Rho GTPase activating protein 27 pseudogene
LRRN4 leucine rich repeat neuronal 4
LSAMP limbic system-associated membrane protein
LTBP4 latent transforming growth factor beta binding protein 4
MAGEA12 melanoma antigen family A12
MAGEA3 melanoma antigen family A3
MBD3L5 methyl-CpG binding domain protein 3-like 5
MECR mitochondrial trans-2-enoyl-CoA reductase
METTL9 methyltransferase like 9
MMP20 matrix metallopeptidase 20
MS4A10 membrane-spanning 4-domains, subfamily A, member 10
MT1X metallothionein 1X
MT2A metallothionein 2A
MTA2 metastasis associated 1 family, member 2
MTFR1L mitochondrial fission regulator 1-like
MYH3 myosin, heavy chain 3, skeletal muscle, embryonic
MYLPF myosin light chain, phosphorylatable, fast skeletal muscle
MYOZ2 myozenin 2
NAPSA napsin A aspartic peptidase
NEUROG3 neurogenin 3
NFS1 NFS1 cysteine desulfurase
NIT1 nitrilase 1
NLGN2 neuroligin 2
NMUR2 neuromedin U receptor 2
NTN5 netrin 5
OAZ3 ornithine decarboxylase antizyme 3
OR10A4 olfactory receptor, family 10, subfamily A, member 4
OR13J1 olfactory receptor, family 13, subfamily J, member 1
OR2H2 olfactory receptor, family 2, subfamily H, member 2
OR2M1P olfactory receptor, family 2, subfamily M, member 1 pseudogene
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OR8B2 olfactory receptor, family 8, subfamily B, member 2
OVGP1 oviductal glycoprotein 1, 120kDa
PAGE2 P antigen family, member 2 (prostate associated)
PCCA propionyl CoA carboxylase, alpha polypeptide
PDILT protein disulfide isomerase-like, testis expressed
PDZD9 PDZ domain containing 9
PLA2G10 phospholipase A2, group X
PLCD4 phospholipase C, delta 4
PLIN5 perilipin 5
PMPCA peptidase (mitochondrial processing) alpha
POLG2 polymerase (DNA directed), gamma 2, accessory subunit
PPA2 pyrophosphatase (inorganic) 2
PPIEL peptidylprolyl isomerase E-like pseudogene
PRR25 proline rich 25
PRSS41 protease, serine, 41
PRSS55 protease, serine, 55
PSG8 pregnancy specific beta-1-glycoprotein 8
PTK6 protein tyrosine kinase 6
PYY peptide YY
RBMXL3 RNA binding motif protein, X-linked-like 3
RHOXF1 Rhox homeobox family, member 1
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RNU11 RNA, U11 small nuclear
RPL36A ribosomal protein L36a
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
SAA3P serum amyloid A3 pseudogene
SATL1 spermidine/spermine N1-acetyl transferase-like 1
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SLC22A24 solute carrier family 22, member 24
SLC25A51 solute carrier family 25, member 51
SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4
SLC50A1 solute carrier family 50 (sugar efflux transporter), member 1
SNORA16A small nucleolar RNA, H/ACA box 16A
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA21 small nucleolar RNA, H/ACA box 21
SNORA25 small nucleolar RNA, H/ACA box 25
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA55 small nucleolar RNA, H/ACA box 55
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA72 small nucleolar RNA, H/ACA box 72
SOX12 SRY (sex determining region Y)-box 12
SPANXA2 SPANX family, member A2
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
SRRM5 serine/arginine repetitive matrix 5
STRADA STE20-related kinase adaptor alpha
SUV420H2 suppressor of variegation 4-20 homolog 2 (Drosophila)
SYCP2L synaptonemal complex protein 2-like
TAAR8 trace amine associated receptor 8
TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAS1R2 taste receptor, type 1, member 2
TBC1D3C TBC1 domain family, member 3C
TBC1D3H TBC1 domain family, member 3H
TBPL2 TATA box binding protein like 2
TCP10 t-complex 10
TCP10L t-complex 10-like
TEX35 testis expressed 35
TEX43 testis expressed 43
TFAP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)
THBS3 thrombospondin 3
TMEM204 transmembrane protein 204
TMEM211 transmembrane protein 211
TMEM86B transmembrane protein 86B
TMUB2 transmembrane and ubiquitin-like domain containing 2
TNNC1 troponin C type 1 (slow)
TPSD1 tryptase delta 1
TRIM50 tripartite motif containing 50
TRIM74 tripartite motif containing 74
TSEN34 TSEN34 tRNA splicing endonuclease subunit
TTLL13P tubulin tyrosine ligase-like family member 13, pseudogene
TTLL8 tubulin tyrosine ligase-like family member 8
TTYH1 tweety family member 1
UBE2E2 ubiquitin-conjugating enzyme E2E 2
USP20 ubiquitin specific peptidase 20
USP44 ubiquitin specific peptidase 44
UTS2 urotensin 2
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae)
ZAN zonadhesin (gene/pseudogene)
ZMYM3 zinc finger, MYM-type 3
ZNF226 zinc finger protein 226
ZNF577 zinc finger protein 577
ZNF579 zinc finger protein 579
ZNF629 zinc finger protein 629
ZNF671 zinc finger protein 671
ZNF749 zinc finger protein 749
ZNF766 zinc finger protein 766
ZNF784 zinc finger protein 784
ZNF805 zinc finger protein 805
ZNF814 zinc finger protein 814
ZSCAN18 zinc finger and SCAN domain containing 18
ZSCAN5B zinc finger and SCAN domain containing 5B

low expression

Symbol Name
GABPB2 GA binding protein transcription factor, beta subunit 2
SLTM SAFB-like, transcription modulator