Brain Lower Grade Glioma_LGG_TCGA-R8-A6MO-01A-11R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

341 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-R8-A6MO-01A-11R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1
ACSM1 acyl-CoA synthetase medium-chain family member 1
ACSM2A acyl-CoA synthetase medium-chain family member 2A
ACSM2B acyl-CoA synthetase medium-chain family member 2B
ACTRT1 actin-related protein T1
ADAM20 ADAM metallopeptidase domain 20
ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif, 8
ADIPOR2 adiponectin receptor 2
ADM adrenomedullin
AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene
AGXT2 alanine--glyoxylate aminotransferase 2
AHSG alpha-2-HS-glycoprotein
AKNA AT-hook transcription factor
ALDH8A1 aldehyde dehydrogenase 8 family, member A1
ALOX15B arachidonate 15-lipoxygenase, type B
ANKRD37 ankyrin repeat domain 37
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2
ARL17B ADP-ribosylation factor-like 17B
ARL4D ADP-ribosylation factor-like 4D
ARRDC2 arrestin domain containing 2
ASIC4 acid sensing (proton gated) ion channel family member 4
ATP11AUN ATP11A upstream neighbor
BARHL1 BarH-like homeobox 1
BCAR4 breast cancer anti-estrogen resistance 4 (non-protein coding)
BMP8A bone morphogenetic protein 8a
BRINP2 bone morphogenetic protein/retinoic acid inducible neural-specific 2
BTBD17 BTB (POZ) domain containing 17
BTG1 B-cell translocation gene 1, anti-proliferative
C10ORF128 chromosome 10 open reading frame 128
C11ORF16 chromosome 11 open reading frame 16
C1ORF64 chromosome 1 open reading frame 64
C9ORF139 chromosome 9 open reading frame 139
CACNG4 calcium channel, voltage-dependent, gamma subunit 4
CAPN11 calpain 11
CAPN3 calpain 3, (p94)
CCDC127 coiled-coil domain containing 127
CCNG2 cyclin G2
CCNH cyclin H
CCNI2 cyclin I family, member 2
CDC42EP2 CDC42 effector protein (Rho GTPase binding) 2
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CDRT15 CMT1A duplicated region transcript 15
CECR6 cat eye syndrome chromosome region, candidate 6
CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding)
CERS5 ceramide synthase 5
CHADL chondroadherin-like
CHKA choline kinase alpha
CHRAC1 chromatin accessibility complex 1
CIRBP cold inducible RNA binding protein
CLEC2D C-type lectin domain family 2, member D
CLEC4E C-type lectin domain family 4, member E
CLK1 CDC-like kinase 1
CLK4 CDC-like kinase 4
CMTM5 CKLF-like MARVEL transmembrane domain containing 5
CNTN6 contactin 6
COG2 component of oligomeric golgi complex 2
COL9A1 collagen, type IX, alpha 1
CORO7 coronin 7
CPB2 carboxypeptidase B2 (plasma)
CPN2 carboxypeptidase N, polypeptide 2
CREB3L1 cAMP responsive element binding protein 3-like 1
CREM cAMP responsive element modulator
CRISPLD2 cysteine-rich secretory protein LCCL domain containing 2
CRYAA crystallin, alpha A
CSPG4 chondroitin sulfate proteoglycan 4
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CYB5D2 cytochrome b5 domain containing 2
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6
CYP4A11 cytochrome P450, family 4, subfamily A, polypeptide 11
CYP4B1 cytochrome P450, family 4, subfamily B, polypeptide 1
CYP4F29P cytochrome P450, family 4, subfamily F, polypeptide 29, pseudogene
DDIT4 DNA-damage-inducible transcript 4
DEFB131 defensin, beta 131
DEFB134 defensin, beta 134
DGKG diacylglycerol kinase, gamma 90kDa
DNAH14 dynein, axonemal, heavy chain 14
DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12
DOHH deoxyhypusine hydroxylase/monooxygenase
DUSP9 dual specificity phosphatase 9
EFHB EF-hand domain family, member B
EFS embryonal Fyn-associated substrate
EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7
EPN2 epsin 2
ESRP2 epithelial splicing regulatory protein 2
EVI5L ecotropic viral integration site 5-like
EXOG endo/exonuclease (5'-3'), endonuclease G-like
EYA1 EYA transcriptional coactivator and phosphatase 1
F2RL3 coagulation factor II (thrombin) receptor-like 3
FAM131C family with sequence similarity 131, member C
FAM170A family with sequence similarity 170, member A
FAM19A4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4
FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
FAM201A family with sequence similarity 201, member A
FAM21A family with sequence similarity 21, member A
FAM58A family with sequence similarity 58, member A
FBXO31 F-box protein 31
FOXD4 forkhead box D4
FOXD4L3 forkhead box D4-like 3
FTX FTX transcript, XIST regulator (non-protein coding)
FUS FUS RNA binding protein
G6PC2 glucose-6-phosphatase, catalytic, 2
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GGT1 gamma-glutamyltransferase 1
GGTLC1 gamma-glutamyltransferase light chain 1
GGTLC2 gamma-glutamyltransferase light chain 2
GJA4 gap junction protein, alpha 4, 37kDa
GLYAT glycine-N-acyltransferase
GLYATL1 glycine-N-acyltransferase-like 1
GPBAR1 G protein-coupled bile acid receptor 1
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
GPR62 G protein-coupled receptor 62
GPR89B G protein-coupled receptor 89B
H2BFM H2B histone family, member M
HAO2 hydroxyacid oxidase 2 (long chain)
HAPLN2 hyaluronan and proteoglycan link protein 2
HEXIM2 hexamethylene bis-acetamide inducible 2
HIATL2 hippocampus abundant transcript-like 2
HIP1R huntingtin interacting protein 1 related
HIRIP3 HIRA interacting protein 3
HIST3H3 histone cluster 3, H3
HKDC1 hexokinase domain containing 1
HNF1B HNF1 homeobox B
HS1BP3 HCLS1 binding protein 3
HSF4 heat shock transcription factor 4
HTRA1 HtrA serine peptidase 1
IL11RA interleukin 11 receptor, alpha
INCA1 inhibitor of CDK, cyclin A1 interacting protein 1
ING2 inhibitor of growth family, member 2
INO80C INO80 complex subunit C
INSM2 insulinoma-associated 2
INSR insulin receptor
INTS6 integrator complex subunit 6
IP6K3 inositol hexakisphosphate kinase 3
ISX intestine-specific homeobox
ITGB1BP2 integrin beta 1 binding protein (melusin) 2
JMJD6 jumonji domain containing 6
KAT8 K(lysine) acetyltransferase 8
KCNIP3 Kv channel interacting protein 3, calsenilin
KCNMB4 potassium channel subfamily M regulatory beta subunit 4
KCTD13 potassium channel tetramerization domain containing 13
KDM3A lysine (K)-specific demethylase 3A
KIF19 kinesin family member 19
KLC4 kinesin light chain 4
KLF15 Kruppel-like factor 15
KLRC3 killer cell lectin-like receptor subfamily C, member 3
KLRK1 killer cell lectin-like receptor subfamily K, member 1
KRCC1 lysine-rich coiled-coil 1
KRT74 keratin 74, type II
KRTAP7-1 keratin associated protein 7-1 (gene/pseudogene)
LASP1 LIM and SH3 protein 1
LAYN layilin
LINC00032 long intergenic non-protein coding RNA 32
LINC00176 long intergenic non-protein coding RNA 176
LINC00320 long intergenic non-protein coding RNA 320
LINC01599 long intergenic non-protein coding RNA 1599
LINGO1 leucine rich repeat and Ig domain containing 1
LIPE lipase, hormone-sensitive
LMBR1L limb development membrane protein 1-like
LMNA lamin A/C
LOC100130264 uncharacterized LOC100130264
LOC143188 uncharacterized LOC143188
LOC389033 placenta-specific 9 pseudogene
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LOC613037 nuclear pore complex interacting protein pseudogene
LOC727924 uncharacterized LOC727924
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LRP2 low density lipoprotein receptor-related protein 2
LRRC75B leucine rich repeat containing 75B
LSMEM1 leucine-rich single-pass membrane protein 1
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
LTB4R leukotriene B4 receptor
LVRN laeverin
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1
LZTS2 leucine zipper, putative tumor suppressor 2
MAGEB3 melanoma antigen family B3
MAGEC3 melanoma antigen family C3
MAPK7 mitogen-activated protein kinase 7
MCF2L MCF.2 cell line derived transforming sequence-like
MFSD2A major facilitator superfamily domain containing 2A
MIA2 melanoma inhibitory activity 2
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MIOX myo-inositol oxygenase
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
MME membrane metallo-endopeptidase
MORC2-AS1 MORC2 antisense RNA 1
MRFAP1L1 Morf4 family associated protein 1-like 1
MSANTD2 Myb/SANT-like DNA-binding domain containing 2
MST1 macrophage stimulating 1
MVK mevalonate kinase
MYOZ1 myozenin 1
MYT1 myelin transcription factor 1
NAGS N-acetylglutamate synthase
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NFYB nuclear transcription factor Y, beta
NINJ2 ninjurin 2
NKAIN2 Na+/K+ transporting ATPase interacting 2
NKX6-2 NK6 homeobox 2
NLRP2 NLR family, pyrin domain containing 2
NLRP7 NLR family, pyrin domain containing 7
NPPA natriuretic peptide A
NRXN2 neurexin 2
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13
NUTM2F NUT family member 2F
NUTM2G NUT family member 2G
NXF4 nuclear RNA export factor 4 pseudogene
OLIG1 oligodendrocyte transcription factor 1
OR2J3 olfactory receptor, family 2, subfamily J, member 3
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR4M1 olfactory receptor, family 4, subfamily M, member 1
OR5H6 olfactory receptor, family 5, subfamily H, member 6 (gene/pseudogene)
OR5K2 olfactory receptor, family 5, subfamily K, member 2
OR5T1 olfactory receptor, family 5, subfamily T, member 1
OR7A5 olfactory receptor, family 7, subfamily A, member 5
OVCH2 ovochymase 2 (gene/pseudogene)
PA2G4P4 proliferation-associated 2G4 pseudogene 4
PAQR4 progestin and adipoQ receptor family member IV
PCDH20 protocadherin 20
PCDHA13 protocadherin alpha 13
PCDHA6 protocadherin alpha 6
PCGF1 polycomb group ring finger 1
PDIA2 protein disulfide isomerase family A, member 2
PGF placental growth factor
PHACTR3 phosphatase and actin regulator 3
PHLDA1 pleckstrin homology-like domain, family A, member 1
PLGLB2 plasminogen-like B2
PNRC1 proline-rich nuclear receptor coactivator 1
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PPIL3 peptidylprolyl isomerase (cyclophilin)-like 3
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PRAP1 proline-rich acidic protein 1
PRCD progressive rod-cone degeneration
PRODH2 proline dehydrogenase (oxidase) 2
PRPH peripherin
PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding)
PTPRVP protein tyrosine phosphatase, receptor type, V, pseudogene
RALGDS ral guanine nucleotide dissociation stimulator
RARA retinoic acid receptor, alpha
RBBP7 retinoblastoma binding protein 7
RBM4B RNA binding motif protein 4B
RBM6 RNA binding motif protein 6
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
RNF112 ring finger protein 112
RNF146 ring finger protein 146
RPL3L ribosomal protein L3-like
RSRC2 arginine/serine-rich coiled-coil 2
RTKN rhotekin
RTP5 receptor (chemosensory) transporter protein 5 (putative)
RUFY4 RUN and FYVE domain containing 4
S1PR5 sphingosine-1-phosphate receptor 5
SAFB scaffold attachment factor B
SCARB2 scavenger receptor class B, member 2
SCARNA15 small Cajal body-specific RNA 15
SCARNA21 small Cajal body-specific RNA 21
SDHAP3 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3
SDPR serum deprivation response
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SEPT8 septin 8
SFTPC surfactant protein C
SLAIN1 SLAIN motif family, member 1
SLC13A1 solute carrier family 13 (sodium/sulfate symporter), member 1
SLC17A4 solute carrier family 17, member 4
SLC22A12 solute carrier family 22 (organic anion/urate transporter), member 12
SLC22A7 solute carrier family 22 (organic anion transporter), member 7
SLC25A2 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC26A5 solute carrier family 26 (anion exchanger), member 5
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SLC31A2 solute carrier family 31 (copper transporter), member 2
SLC35D3 solute carrier family 35, member D3
SLC39A5 solute carrier family 39 (zinc transporter), member 5
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8
SLCO4A1 solute carrier organic anion transporter family, member 4A1
SLITRK1 SLIT and NTRK-like family, member 1
SMAD7 SMAD family member 7
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SMTN smoothelin
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1
SNAR-B2 small ILF3/NF90-associated RNA B2
SNAR-F small ILF3/NF90-associated RNA F
SNORA13 small nucleolar RNA, H/ACA box 13
SNORA15 small nucleolar RNA, H/ACA box 15
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA72 small nucleolar RNA, H/ACA box 72
SOX8 SRY (sex determining region Y)-box 8
SPSB4 splA/ryanodine receptor domain and SOCS box containing 4
SRSF3 serine/arginine-rich splicing factor 3
SSTR2 somatostatin receptor 2
ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5
STK31 serine/threonine kinase 31
STMN4 stathmin-like 4
SYCE2 synaptonemal complex central element protein 2
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TBC1D10B TBC1 domain family, member 10B
TBX5 T-box 5
TEX13B testis expressed 13B
TFEB transcription factor EB
TINAG tubulointerstitial nephritis antigen
TLE6 transducin-like enhancer of split 6
TM4SF5 transmembrane 4 L six family member 5
TMEM121 transmembrane protein 121
TMEM175 transmembrane protein 175
TMEM179 transmembrane protein 179
TMEM88B transmembrane protein 88B
TNK2 tyrosine kinase, non-receptor, 2
TOP1P2 topoisomerase (DNA) I pseudogene 2
TPPP2 tubulin polymerization-promoting protein family member 2
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1
TRAF4 TNF receptor-associated factor 4
TRIM15 tripartite motif containing 15
TRIM62 tripartite motif containing 62
TSC22D3 TSC22 domain family, member 3
TSPAN15 tetraspanin 15
TSPAN8 tetraspanin 8
U2AF1 U2 small nuclear RNA auxiliary factor 1
UGT2A3 UDP glucuronosyltransferase 2 family, polypeptide A3
UHRF1 ubiquitin-like with PHD and ring finger domains 1
UPK2 uroplakin 2
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
WDR20 WD repeat domain 20
WWP2 WW domain containing E3 ubiquitin protein ligase 2
YPEL4 yippee-like 4 (Drosophila)
ZCCHC24 zinc finger, CCHC domain containing 24
ZNF141 zinc finger protein 141
ZNF263 zinc finger protein 263
ZNF513 zinc finger protein 513
ZNF652 zinc finger protein 652
ZNF654 zinc finger protein 654
ZNF821 zinc finger protein 821
ZPBP2 zona pellucida binding protein 2
ZSWIM4 zinc finger, SWIM-type containing 4

low expression

Symbol Name
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B
ZNF808 zinc finger protein 808