Brain Lower Grade Glioma_LGG_TCGA-R8-A6MK-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

311 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-R8-A6MK-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ABHD3 abhydrolase domain containing 3
ABHD4 abhydrolase domain containing 4
ABLIM1 actin binding LIM protein 1
ACKR3 atypical chemokine receptor 3
ACSBG1 acyl-CoA synthetase bubblegum family member 1
ADGRA3 adhesion G protein-coupled receptor A3
ADGRV1 adhesion G protein-coupled receptor V1
ADHFE1 alcohol dehydrogenase, iron containing, 1
ADSSL1 adenylosuccinate synthase like 1
AKR1C3 aldo-keto reductase family 1, member C3
ALAD aminolevulinate dehydratase
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ALDH7A1 aldehyde dehydrogenase 7 family, member A1
ANAPC10 anaphase promoting complex subunit 10
ANKDD1A ankyrin repeat and death domain containing 1A
ANKRD40 ankyrin repeat domain 40
ANXA8L1 annexin A8-like 1
AP3S2 adaptor-related protein complex 3, sigma 2 subunit
ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26
ARL6IP6 ADP-ribosylation factor-like 6 interacting protein 6
ASB8 ankyrin repeat and SOCS box containing 8
ASF1A anti-silencing function 1A histone chaperone
ASRGL1 asparaginase like 1
ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide
ATXN7 ataxin 7
BAALC brain and acute leukemia, cytoplasmic
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BMPR1B bone morphogenetic protein receptor, type IB
BOLL boule-like RNA-binding protein
C11ORF42 chromosome 11 open reading frame 42
C12ORF29 chromosome 12 open reading frame 29
C1ORF27 chromosome 1 open reading frame 27
C1QTNF1 C1q and tumor necrosis factor related protein 1
C20ORF202 chromosome 20 open reading frame 202
C2ORF72 chromosome 2 open reading frame 72
C2ORF76 chromosome 2 open reading frame 76
C5ORF60 chromosome 5 open reading frame 60
CACYBP calcyclin binding protein
CASC3 cancer susceptibility candidate 3
CASC4 cancer susceptibility candidate 4
CBWD1 COBW domain containing 1
CBX1 chromobox homolog 1
CCDC160 coiled-coil domain containing 160
CCL1 chemokine (C-C motif) ligand 1
CDC14B cell division cycle 14B
CDKL3 cyclin-dependent kinase-like 3
CGB chorionic gonadotropin, beta polypeptide
CGB5 chorionic gonadotropin, beta polypeptide 5
CGB8 chorionic gonadotropin, beta polypeptide 8
CHMP5 charged multivesicular body protein 5
CLDN25 claudin 25
COA5 cytochrome c oxidase assembly factor 5
COL27A1 collagen, type XXVII, alpha 1
CPE carboxypeptidase E
CRLF2 cytokine receptor-like factor 2
CSH2 chorionic somatomammotropin hormone 2
CT47A2 cancer/testis antigen family 47, member A2
CT47B1 cancer/testis antigen family 47, member B1
CXORF57 chromosome X open reading frame 57
CYB5A cytochrome b5 type A (microsomal)
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2
DCTN6 dynactin 6
DDHD1 DDHD domain containing 1
DDX59 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
DHRS4-AS1 DHRS4 antisense RNA 1
DNAJC12 DnaJ (Hsp40) homolog, subfamily C, member 12
DPPA3 developmental pluripotency associated 3
DSCR8 Down syndrome critical region 8
DTNA dystrobrevin, alpha
EAF2 ELL associated factor 2
EIF3J eukaryotic translation initiation factor 3, subunit J
EIF5B eukaryotic translation initiation factor 5B
ELOVL2 ELOVL fatty acid elongase 2
EMC4 ER membrane protein complex subunit 4
EMC7 ER membrane protein complex subunit 7
ENDOU endonuclease, polyU-specific
ENOPH1 enolase-phosphatase 1
ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3
ERBB4 erb-b2 receptor tyrosine kinase 4
ERO1LB ERO1-like beta (S. cerevisiae)
ESRRG estrogen-related receptor gamma
F5 coagulation factor V (proaccelerin, labile factor)
FAM133A family with sequence similarity 133, member A
FAM149B1 family with sequence similarity 149, member B1
FAM210B family with sequence similarity 210, member B
FAM90A1 family with sequence similarity 90, member A1
FGF2 fibroblast growth factor 2 (basic)
FIGLA folliculogenesis specific basic helix-loop-helix
FLJ33360 FLJ33360 protein
FMR1NB fragile X mental retardation 1 neighbor
FOXG1 forkhead box G1
FUT9 fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1
GAGE2A G antigen 2A
GAGE4 G antigen 4
GAGE8 G antigen 8
GDF9 growth differentiation factor 9
GFAP glial fibrillary acidic protein
GJA10 gap junction protein, alpha 10, 62kDa
GKAP1 G kinase anchoring protein 1
GNPDA2 glucosamine-6-phosphate deaminase 2
GOLGA6L9 golgin A6 family-like 9
GOLGA7B golgin A7 family, member B
GPRC5B G protein-coupled receptor, class C, group 5, member B
GRIA1 glutamate receptor, ionotropic, AMPA 1
GRIN2C glutamate receptor, ionotropic, N-methyl D-aspartate 2C
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
HDDC2 HD domain containing 2
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HIGD1A HIG1 hypoxia inducible domain family, member 1A
HMGN5 high mobility group nucleosome binding domain 5
HRSP12 heat-responsive protein 12
HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6
HSPB8 heat shock 22kDa protein 8
IGDCC4 immunoglobulin superfamily, DCC subclass, member 4
IL33 interleukin 33
IQCK IQ motif containing K
ITIH4 inter-alpha-trypsin inhibitor heavy chain family, member 4
KATNBL1 katanin p80 subunit B-like 1
KCNE2 potassium channel, voltage gated subfamily E regulatory beta subunit 2
KCNIP1 Kv channel interacting protein 1
KCNJ10 potassium channel, inwardly rectifying subfamily J, member 10
KCTD21 potassium channel tetramerization domain containing 21
KDSR 3-ketodihydrosphingosine reductase
KIAA1456 KIAA1456
KIF6 kinesin family member 6
KLHDC1 kelch domain containing 1
KRTAP13-2 keratin associated protein 13-2
LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase
LIFR leukemia inhibitory factor receptor alpha
LIMCH1 LIM and calponin homology domains 1
LIN7A lin-7 homolog A (C. elegans)
LINC00032 long intergenic non-protein coding RNA 32
LINC01551 long intergenic non-protein coding RNA 1551
LOC100128542
LRIT1 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
LRP1B low density lipoprotein receptor-related protein 1B
LRRC16A leucine rich repeat containing 16A
LSAMP limbic system-associated membrane protein
LUZP4 leucine zipper protein 4
MAGEB1 melanoma antigen family B1
MB myoglobin
MCC mutated in colorectal cancers
MCEE methylmalonyl CoA epimerase
MDN1 MDN1, midasin homolog (yeast)
MEGF9 multiple EGF-like-domains 9
MIR99AHG mir-99a-let-7c cluster host gene
MOCS2 molybdenum cofactor synthesis 2
MRO maestro
MRVI1 murine retrovirus integration site 1 homolog
NAAA N-acylethanolamine acid amidase
NBPF10 neuroblastoma breakpoint family, member 10
NDP Norrie disease (pseudoglioma)
NDRG2 NDRG family member 2
NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
NDUFB3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
NFS1 NFS1 cysteine desulfurase
NPAS3 neuronal PAS domain protein 3
NR1D1 nuclear receptor subfamily 1, group D, member 1
NR3C2 nuclear receptor subfamily 3, group C, member 2
NSRP1 nuclear speckle splicing regulatory protein 1
NTM neurotrimin
OLFM2 olfactomedin 2
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR2H2 olfactory receptor, family 2, subfamily H, member 2
OR4M1 olfactory receptor, family 4, subfamily M, member 1
OR4M2 olfactory receptor, family 4, subfamily M, member 2
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR51B2 olfactory receptor, family 51, subfamily B, member 2 (gene/pseudogene)
OR52N1 olfactory receptor, family 52, subfamily N, member 1
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OR5AU1 olfactory receptor, family 5, subfamily AU, member 1
OR5B21 olfactory receptor, family 5, subfamily B, member 21
ORMDL3 ORMDL sphingolipid biosynthesis regulator 3
OSBPL11 oxysterol binding protein-like 11
OTOP1 otopetrin 1
PAGE1 P antigen family, member 1 (prostate associated)
PAGE2 P antigen family, member 2 (prostate associated)
PAGE2B P antigen family, member 2B
PAGE5 P antigen family, member 5 (prostate associated)
PCDHB3 protocadherin beta 3
PCDHGA11 protocadherin gamma subfamily A, 11
PCDHGB5 protocadherin gamma subfamily B, 5
PCGF5 polycomb group ring finger 5
PDE4D phosphodiesterase 4D, cAMP-specific
PDLIM3 PDZ and LIM domain 3
PDZD9 PDZ domain containing 9
PEA15 phosphoprotein enriched in astrocytes 15
PHYHIPL phytanoyl-CoA 2-hydroxylase interacting protein-like
PLA2G2C phospholipase A2, group IIC
PMP2 peripheral myelin protein 2
PNPO pyridoxamine 5'-phosphate oxidase
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit
PRPF40B PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)
PSD2 pleckstrin and Sec7 domain containing 2
PTGES3 prostaglandin E synthase 3 (cytosolic)
PTGFR prostaglandin F receptor (FP)
PXT1 peroxisomal, testis specific 1
R3HDML R3H domain containing-like
RAB10 RAB10, member RAS oncogene family
RAB22A RAB22A, member RAS oncogene family
RAB29 RAB29, member RAS oncogene family
RAB41 RAB41, member RAS oncogene family
RAB5B RAB5B, member RAS oncogene family
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RGMA repulsive guidance molecule family member a
RGR retinal G protein coupled receptor
RMDN3 regulator of microtubule dynamics 3
RNASE7 ribonuclease, RNase A family, 7
RNF170 ring finger protein 170
RORA RAR-related orphan receptor A
RPL23AP53 ribosomal protein L23a pseudogene 53
RPP30 ribonuclease P/MRP 30kDa subunit
RRH retinal pigment epithelium-derived rhodopsin homolog
RTFDC1 replication termination factor 2 domain containing 1
SAP18 Sin3A-associated protein, 18kDa
SASH1 SAM and SH3 domain containing 1
SDS serine dehydratase
SEC22C SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
SEC62 SEC62 homolog (S. cerevisiae)
SELL selectin L
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2
SFT2D1 SFT2 domain containing 1
SGCE sarcoglycan, epsilon
SH3BP2 SH3-domain binding protein 2
SHISA3 shisa family member 3
SHISA6 shisa family member 6
SLC13A1 solute carrier family 13 (sodium/sulfate symporter), member 1
SLC18B1 solute carrier family 18, subfamily B, member 1
SLC25A18 solute carrier family 25 (glutamate carrier), member 18
SLC25A28 solute carrier family 25 (mitochondrial iron transporter), member 28
SLC35B3 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2
SLC44A2 solute carrier family 44 (choline transporter), member 2
SLCO1A2 solute carrier organic anion transporter family, member 1A2
SMEK3P SMEK homolog 3, suppressor of mek1 (Dictyostelium) pseudogene
SMIM15 small integral membrane protein 15
SMIM8 small integral membrane protein 8
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA16B small nucleolar RNA, H/ACA box 16B
SNORA29 small nucleolar RNA, H/ACA box 29
SNORA37 small nucleolar RNA, H/ACA box 37
SNORA71B small nucleolar RNA, H/ACA box 71B
SNORA81 small nucleolar RNA, H/ACA box 81
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
SNX31 sorting nexin 31
SOD1 superoxide dismutase 1, soluble
SPANXD SPANX family, member D
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPARCL1 SPARC-like 1 (hevin)
SPATA25 spermatogenesis associated 25
SPOCK2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
SRI sorcin
SSX1 synovial sarcoma, X breakpoint 1
SSX2 synovial sarcoma, X breakpoint 2
STOM stomatin
STX19 syntaxin 19
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4
SUMO4 small ubiquitin-like modifier 4
SYCE3 synaptonemal complex central element protein 3
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
TAS2R50 taste receptor, type 2, member 50
TBC1D28 TBC1 domain family, member 28
TCEAL5 transcription elongation factor A (SII)-like 5
TCP10L2 t-complex 10-like 2
TIMM21 translocase of inner mitochondrial membrane 21 homolog (yeast)
TMEM128 transmembrane protein 128
TMEM133 transmembrane protein 133
TMEM257 transmembrane protein 257
TMOD2 tropomodulin 2 (neuronal)
TPD52L1 tumor protein D52-like 1
TPSD1 tryptase delta 1
TRIM60 tripartite motif containing 60
TRIM78P tripartite motif containing 78, pseudogene
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TSLP thymic stromal lymphopoietin
TTPA tocopherol (alpha) transfer protein
TUBA3C tubulin, alpha 3c
UCN3 urocortin 3
ULK4P2 ULK4 pseudogene 2
UNC50 unc-50 homolog (C. elegans)
VAMP4 vesicle-associated membrane protein 4
VANGL2 VANGL planar cell polarity protein 2
VRK1 vaccinia related kinase 1
WASF3 WAS protein family, member 3
WBP2NL WBP2 N-terminal like
WBP4 WW domain binding protein 4
WBP5 WW domain binding protein 5
WDR61 WD repeat domain 61
WFDC11 WAP four-disulfide core domain 11
WISP3 WNT1 inducible signaling pathway protein 3
XAGE1E X antigen family, member 1E
YIPF7 Yip1 domain family, member 7
ZFYVE21 zinc finger, FYVE domain containing 21
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF23 zinc finger protein 23
ZNF280B zinc finger protein 280B
ZNF385A zinc finger protein 385A
ZNF443 zinc finger protein 443
ZNF451 zinc finger protein 451
ZNF621 zinc finger protein 621

low expression

Symbol Name
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
ZNF630 zinc finger protein 630