Brain Lower Grade Glioma_LGG_TCGA-QH-A6CZ-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

207 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-QH-A6CZ-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS2 alanyl-tRNA synthetase 2, mitochondrial
ACACA acetyl-CoA carboxylase alpha
ACO2 aconitase 2, mitochondrial
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5
ADRBK2 adrenergic, beta, receptor kinase 2
AFF2 AF4/FMR2 family, member 2
ANKAR ankyrin and armadillo repeat containing
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
ART1 ADP-ribosyltransferase 1
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ASTL astacin-like metallo-endopeptidase (M12 family)
ATRX alpha thalassemia/mental retardation syndrome X-linked
ATXN10 ataxin 10
BCCIP BRCA2 and CDKN1A interacting protein
BCL2L13 BCL2-like 13 (apoptosis facilitator)
BID BH3 interacting domain death agonist
BLM Bloom syndrome, RecQ helicase-like
BSPH1 binder of sperm protein homolog 1
C15ORF39 chromosome 15 open reading frame 39
C17ORF51 chromosome 17 open reading frame 51
C22ORF39 chromosome 22 open reading frame 39
C8ORF86 chromosome 8 open reading frame 86
CACNG2 calcium channel, voltage-dependent, gamma subunit 2
CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle)
CCDC178 coiled-coil domain containing 178
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion
CHRM4 cholinergic receptor, muscarinic 4
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CLEC12B C-type lectin domain family 12, member B
COPS8 COP9 signalosome subunit 8
COX20 COX20 cytochrome c oxidase assembly factor
CPB2 carboxypeptidase B2 (plasma)
CSDC2 cold shock domain containing C2, RNA binding
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CT45A3 cancer/testis antigen family 45, member A3
CTNNA3 catenin (cadherin-associated protein), alpha 3
DAND5 DAN domain family member 5, BMP antagonist
DDX25 DEAD (Asp-Glu-Ala-Asp) box helicase 25
DESI1 desumoylating isopeptidase 1
DGCR10 DiGeorge syndrome critical region gene 10 (non-protein coding)
DGCR9 DiGeorge syndrome critical region gene 9 (non-protein coding)
DKFZP434L187 uncharacterized LOC26082
DPPA3 developmental pluripotency associated 3
ENDOU endonuclease, polyU-specific
EPHA5 EPH receptor A5
EPS8L3 EPS8-like 3
FAM66C family with sequence similarity 66, member C
FBXL17 F-box and leucine-rich repeat protein 17
FBXO45 F-box protein 45
FGF14 fibroblast growth factor 14
FGF9 fibroblast growth factor 9
FMO3 flavin containing monooxygenase 3
FMO6P flavin containing monooxygenase 6 pseudogene
FNDC5 fibronectin type III domain containing 5
FSHB follicle stimulating hormone, beta polypeptide
FSIP1 fibrous sheath interacting protein 1
G6PC glucose-6-phosphatase, catalytic subunit
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1
GNAZ guanine nucleotide binding protein (G protein), alpha z polypeptide
GRID2 glutamate receptor, ionotropic, delta 2
GRXCR1 glutaredoxin, cysteine rich 1
GSTM1 glutathione S-transferase mu 1
GUCY1A2 guanylate cyclase 1, soluble, alpha 2
GUCY1A3 guanylate cyclase 1, soluble, alpha 3
HDHD2 haloacid dehalogenase-like hydrolase domain containing 2
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HMHB1 histocompatibility (minor) HB-1
HNMT histamine N-methyltransferase
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H')
HSF2BP heat shock transcription factor 2 binding protein
IDI1 isopentenyl-diphosphate delta isomerase 1
ISX intestine-specific homeobox
ITGA8 integrin, alpha 8
KCNG4 potassium channel, voltage gated modifier subfamily G, member 4
KCNIP2 Kv channel interacting protein 2
KIAA1456 KIAA1456
KIAA1715 KIAA1715
KLB klotho beta
KLF1 Kruppel-like factor 1 (erythroid)
KNG1 kininogen 1
LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
LCE2C late cornified envelope 2C
LDOC1L leucine zipper, down-regulated in cancer 1-like
LINC00588 long intergenic non-protein coding RNA 588
LOC283856 uncharacterized LOC283856
LOC643486
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LONRF1 LON peptidase N-terminal domain and ring finger 1
LPL lipoprotein lipase
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
LRRC34 leucine rich repeat containing 34
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2
LRRIQ4 leucine-rich repeats and IQ motif containing 4
MAPK12 mitogen-activated protein kinase 12
MCF2 MCF.2 cell line derived transforming sequence
MICU2 mitochondrial calcium uptake 2
MIEF1 mitochondrial elongation factor 1
MMD2 monocyte to macrophage differentiation-associated 2
MME membrane metallo-endopeptidase
MRPL35 mitochondrial ribosomal protein L35
MTMR3 myotubularin related protein 3
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NBPF15 neuroblastoma breakpoint family, member 15
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa
NELL1 NEL-like 1 (chicken)
NFKBIE nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
NHP2L1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
NR2E3 nuclear receptor subfamily 2, group E, member 3
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2L3 olfactory receptor, family 2, subfamily L, member 3
OR4M2 olfactory receptor, family 4, subfamily M, member 2
OR51Q1 olfactory receptor, family 51, subfamily Q, member 1 (gene/pseudogene)
OR8D4 olfactory receptor, family 8, subfamily D, member 4
PARVA parvin, alpha
PCDHA6 protocadherin alpha 6
PCDHA7 protocadherin alpha 7
PCDHB18P protocadherin beta 18 pseudogene
PCDHB19P protocadherin beta 19 pseudogene
PDZD4 PDZ domain containing 4
PEX26 peroxisomal biogenesis factor 26
PIGS phosphatidylinositol glycan anchor biosynthesis, class S
PITPNB phosphatidylinositol transfer protein, beta
PLA2G2C phospholipase A2, group IIC
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLD5 phospholipase D family, member 5
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PQLC2L PQ loop repeat containing 2-like
PRPS1 phosphoribosyl pyrophosphate synthetase 1
PTGFR prostaglandin F receptor (FP)
PVALB parvalbumin
RAB31 RAB31, member RAS oncogene family
RAD9B RAD9 homolog B (S. pombe)
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RBM26 RNA binding motif protein 26
REN renin
RFPL1S RFPL1 antisense RNA 1
RGAG4 retrotransposon gag domain containing 4
RHOXF2B Rhox homeobox family, member 2B
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
RIT2 Ras-like without CAAX 2
RNF185 ring finger protein 185
RNF215 ring finger protein 215
RPA4 replication protein A4, 30kDa
SAMD5 sterile alpha motif domain containing 5
SC5D sterol-C5-desaturase
SCEL sciellin
SCN3B sodium channel, voltage gated, type III beta subunit
SEPT3 septin 3
SETD4 SET domain containing 4
SETD7 SET domain containing (lysine methyltransferase) 7
SF3A1 splicing factor 3a, subunit 1, 120kDa
SH3PXD2A SH3 and PX domains 2A
SLAIN1 SLAIN motif family, member 1
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8
SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11
SLC30A9 solute carrier family 30 (zinc transporter), member 9
SLC35G5 solute carrier family 35, member G5
SND1-IT1 SND1 intronic transcript 1
SNORA51 small nucleolar RNA, H/ACA box 51
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)
SPANXC SPANX family, member C
SPINK5 serine peptidase inhibitor, Kazal type 5
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
SRRD SRR1 domain containing
SSTR2 somatostatin receptor 2
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
STARD5 StAR-related lipid transfer (START) domain containing 5
SUN5 Sad1 and UNC84 domain containing 5
SYN3 synapsin III
SYT13 synaptotagmin XIII
SYT14 synaptotagmin XIV
SYT9 synaptotagmin IX
TAS2R19 taste receptor, type 2, member 19
TAS2R9 taste receptor, type 2, member 9
TBC1D10A TBC1 domain family, member 10A
TBRG1 transforming growth factor beta regulator 1
TCTE1 t-complex-associated-testis-expressed 1
TDH L-threonine dehydrogenase (pseudogene)
TEF thyrotrophic embryonic factor
TESC tescalcin
TEX13B testis expressed 13B
TIMM10B translocase of inner mitochondrial membrane 10 homolog B (yeast)
TMEM151B transmembrane protein 151B
TMX2 thioredoxin-related transmembrane protein 2
TRAF5 TNF receptor-associated factor 5
TRIM10 tripartite motif containing 10
TRIM67 tripartite motif containing 67
TRPC5 transient receptor potential cation channel, subfamily C, member 5
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
TUB tubby bipartite transcription factor
VSTM5 V-set and transmembrane domain containing 5
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial
YAF2 YY1 associated factor 2
ZC3H12B zinc finger CCCH-type containing 12B
ZCCHC16 zinc finger, CCHC domain containing 16
ZNF702P zinc finger protein 702, pseudogene
ZSCAN10 zinc finger and SCAN domain containing 10

low expression

Symbol Name
OXA1L oxidase (cytochrome c) assembly 1-like
RNF31 ring finger protein 31
WDR81 WD repeat domain 81