Brain Lower Grade Glioma_LGG_TCGA-QH-A65Z-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

167 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-QH-A65Z-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAT2 acetyl-CoA acetyltransferase 2
ADAM29 ADAM metallopeptidase domain 29
ADCK1 aarF domain containing kinase 1
ADGRF1 adhesion G protein-coupled receptor F1
AHSG alpha-2-HS-glycoprotein
AKR1B10 aldo-keto reductase family 1, member B10 (aldose reductase)
ANAPC13 anaphase promoting complex subunit 13
ASF1A anti-silencing function 1A histone chaperone
BARHL1 BarH-like homeobox 1
C10ORF99 chromosome 10 open reading frame 99
C11ORF94 chromosome 11 open reading frame 94
C14ORF1 chromosome 14 open reading frame 1
C14ORF28 chromosome 14 open reading frame 28
C15ORF32 chromosome 15 open reading frame 32
C16ORF82 chromosome 16 open reading frame 82
C17ORF100 chromosome 17 open reading frame 100
C17ORF50 chromosome 17 open reading frame 50
C3ORF33 chromosome 3 open reading frame 33
C4ORF27 chromosome 4 open reading frame 27
CALML3 calmodulin-like 3
CAPNS2 calpain, small subunit 2
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2)
CDR1 cerebellar degeneration-related protein 1, 34kDa
CLDN8 claudin 8
CLVS1 clavesin 1
COQ3 coenzyme Q3 methyltransferase
COX7B2 cytochrome c oxidase subunit VIIb2
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1
DEFB131 defensin, beta 131
DGCR6 DiGeorge syndrome critical region gene 6
DHCR7 7-dehydrocholesterol reductase
DIRC2 disrupted in renal carcinoma 2
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DPPA3 developmental pluripotency associated 3
DSG3 desmoglein 3
EGLN3 egl-9 family hypoxia-inducible factor 3
EHD1 EH-domain containing 1
EID1 EP300 interacting inhibitor of differentiation 1
ETV4 ets variant 4
ETV5 ets variant 5
FAHD1 fumarylacetoacetate hydrolase domain containing 1
FAM102A family with sequence similarity 102, member A
FAM186A family with sequence similarity 186, member A
FAM201A family with sequence similarity 201, member A
FAM218A family with sequence similarity 218, member A
FAM90A7P putative protein FAM90A7
FDPS farnesyl diphosphate synthase
FGFBP3 fibroblast growth factor binding protein 3
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GHSR growth hormone secretagogue receptor
GKAP1 G kinase anchoring protein 1
GMEB2 glucocorticoid modulatory element binding protein 2
GPX2 glutathione peroxidase 2
GTSE1-AS1 GTSE1 antisense RNA 1 (head to head)
H2BFM H2B histone family, member M
HEY1 hes-related family bHLH transcription factor with YRPW motif 1
HSPA1L heat shock 70kDa protein 1-like
IDI1 isopentenyl-diphosphate delta isomerase 1
IFNA10 interferon, alpha 10
INSIG1 insulin induced gene 1
IVL involucrin
KATNBL1 katanin p80 subunit B-like 1
KC6 keratoconus gene 6
KCNK3 potassium channel, two pore domain subfamily K, member 3
KLHDC1 kelch domain containing 1
LCAT lecithin-cholesterol acyltransferase
LCE1B late cornified envelope 1B
LCE1C late cornified envelope 1C
LCE1D late cornified envelope 1D
LECT2 leukocyte cell-derived chemotaxin 2
LIN28A lin-28 homolog A (C. elegans)
LINC00114 long intergenic non-protein coding RNA 114
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOR loricrin
LRRC75B leucine rich repeat containing 75B
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MAGEA1 melanoma antigen family A1
MAGEA9B melanoma antigen family A9B
MAGEF1 melanoma antigen family F1
MCMDC2 minichromosome maintenance domain containing 2
MFGE8 milk fat globule-EGF factor 8 protein
MIMT1 MER1 repeat containing imprinted transcript 1 (non-protein coding)
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type
MSMO1 methylsterol monooxygenase 1
MVD mevalonate (diphospho) decarboxylase
MVK mevalonate kinase
NMUR2 neuromedin U receptor 2
NOG noggin
NOXO1 NADPH oxidase organizer 1
NPR1 natriuretic peptide receptor 1
NSDHL NAD(P) dependent steroid dehydrogenase-like
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7
OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR7E91P olfactory receptor, family 7, subfamily E, member 91 pseudogene
PCDHA12 protocadherin alpha 12
PCDHA3 protocadherin alpha 3
PCDHA8 protocadherin alpha 8
PCDHB10 protocadherin beta 10
PCDHGA3 protocadherin gamma subfamily A, 3
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
PIGH phosphatidylinositol glycan anchor biosynthesis, class H
POF1B premature ovarian failure, 1B
PRPSAP2 phosphoribosyl pyrophosphate synthetase-associated protein 2
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
PTGES3 prostaglandin E synthase 3 (cytosolic)
RAB28 RAB28, member RAS oncogene family
RAI2 retinoic acid induced 2
RIPPLY1 ripply transcriptional repressor 1
RIT2 Ras-like without CAAX 2
RPS4Y2 ribosomal protein S4, Y-linked 2
RRN3P1 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1
RTP5 receptor (chemosensory) transporter protein 5 (putative)
SCARB1 scavenger receptor class B, member 1
SCARNA9 small Cajal body-specific RNA 9
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13
SFR1 SWI5-dependent recombination repair 1
SFTA2 surfactant associated 2
SHC2 SHC (Src homology 2 domain containing) transforming protein 2
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC35F1 solute carrier family 35, member F1
SLC5A10 solute carrier family 5 (sodium/sugar cotransporter), member 10
SLIT1 slit homolog 1 (Drosophila)
SMCP sperm mitochondria-associated cysteine-rich protein
SOST sclerostin
SPATA5L1 spermatogenesis associated 5-like 1
SPATA9 spermatogenesis associated 9
SPRR1A small proline-rich protein 1A
SPRR2G small proline-rich protein 2G
SPRR3 small proline-rich protein 3
ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5
STPG2 sperm-tail PG-rich repeat containing 2
SYCE2 synaptonemal complex central element protein 2
TAS2R30 taste receptor, type 2, member 30
TAS2R39 taste receptor, type 2, member 39
TBC1D29 TBC1 domain family, member 29
TBX6 T-box 6
TCTE3 t-complex-associated-testis-expressed 3
TDGF1 teratocarcinoma-derived growth factor 1
TMEM196 transmembrane protein 196
TMEM257 transmembrane protein 257
TMEM41B transmembrane protein 41B
TMEM97 transmembrane protein 97
TMPRSS11A transmembrane protease, serine 11A
TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene
TMSB4Y thymosin beta 4, Y-linked
TRIM53AP tripartite motif containing 53A, pseudogene
TRPC3 transient receptor potential cation channel, subfamily C, member 3
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6
UNC93A unc-93 homolog A (C. elegans)
URB1-AS1 URB1 antisense RNA 1 (head to head)
VSIG10 V-set and immunoglobulin domain containing 10
WDR89 WD repeat domain 89
XAGE1E X antigen family, member 1E

low expression

Symbol Name
GCFC2 GC-rich sequence DNA-binding factor 2
GPN2 GPN-loop GTPase 2
IPO5 importin 5
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
WBP4 WW domain binding protein 4
ZMYM2 zinc finger, MYM-type 2