Brain Lower Grade Glioma_LGG_TCGA-QH-A65S-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

265 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-QH-A65S-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAT1 acetyl-CoA acetyltransferase 1
ACYP2 acylphosphatase 2, muscle type
ADAM7 ADAM metallopeptidase domain 7
ADD3 adducin 3 (gamma)
ADGRA3 adhesion G protein-coupled receptor A3
ADGRG7 adhesion G protein-coupled receptor G7
AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene
AHSP alpha hemoglobin stabilizing protein
AKAP4 A kinase (PRKA) anchor protein 4
ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
AMY1A amylase, alpha 1A (salivary)
ANKRD40 ankyrin repeat domain 40
ANO1 anoctamin 1, calcium activated chloride channel
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
APOC1 apolipoprotein C-I
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ATP5L2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2
B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
BOK BCL2-related ovarian killer
BRD7P3 bromodomain containing 7 pseudogene 3
BRD9 bromodomain containing 9
BTBD18 BTB (POZ) domain containing 18
C11ORF52 chromosome 11 open reading frame 52
C11ORF57 chromosome 11 open reading frame 57
C11ORF71 chromosome 11 open reading frame 71
C18ORF32 chromosome 18 open reading frame 32
C19ORF73 chromosome 19 open reading frame 73
C1ORF168 chromosome 1 open reading frame 168
C1ORF210 chromosome 1 open reading frame 210
C1ORF64 chromosome 1 open reading frame 64
C3P1 complement component 3 precursor pseudogene
C4ORF3 chromosome 4 open reading frame 3
C5ORF60 chromosome 5 open reading frame 60
C7ORF69 chromosome 7 open reading frame 69
C8A complement component 8, alpha polypeptide
CA1 carbonic anhydrase I
CABLES1 Cdk5 and Abl enzyme substrate 1
CALN1 calneuron 1
CARD14 caspase recruitment domain family, member 14
CBLC Cbl proto-oncogene C, E3 ubiquitin protein ligase
CBWD3 COBW domain containing 3
CCDC63 coiled-coil domain containing 63
CCDC90B coiled-coil domain containing 90B
CCT5 chaperonin containing TCP1, subunit 5 (epsilon)
CDC16 cell division cycle 16
CDC26 cell division cycle 26
CDC42EP2 CDC42 effector protein (Rho GTPase binding) 2
CDK2AP2 cyclin-dependent kinase 2 associated protein 2
CENPB centromere protein B, 80kDa
CERS3 ceramide synthase 3
CFL1 cofilin 1 (non-muscle)
CHKA choline kinase alpha
CHRM5 cholinergic receptor, muscarinic 5
CLDN4 claudin 4
CLNS1A chloride channel, nucleotide-sensitive, 1A
CLPTM1L CLPTM1-like
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
CRISP3 cysteine-rich secretory protein 3
CSDC2 cold shock domain containing C2, RNA binding
CSH2 chorionic somatomammotropin hormone 2
CTRB2 chymotrypsinogen B2
CUL4A cullin 4A
CWC15 CWC15 spliceosome-associated protein
CXADRP3 coxsackie virus and adenovirus receptor pseudogene 3
CXCL17 chemokine (C-X-C motif) ligand 17
DIO3OS DIO3 opposite strand/antisense RNA (head to head)
DPH3 diphthamide biosynthesis 3
DPPA3 developmental pluripotency associated 3
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1
EPB42 erythrocyte membrane protein band 4.2
EPCAM epithelial cell adhesion molecule
EPM2A epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
ERCC5 excision repair cross-complementation group 5
ERVFRD-1 endogenous retrovirus group FRD, member 1
EVI2A ecotropic viral integration site 2A
EVPLL envoplakin-like
FADS2 fatty acid desaturase 2
FAM127A family with sequence similarity 127, member A
FAM131C family with sequence similarity 131, member C
FAM170B family with sequence similarity 170, member B
FAM173B family with sequence similarity 173, member B
FAM212A family with sequence similarity 212, member A
FAM86C1 family with sequence similarity 86, member C1
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FBXW4 F-box and WD repeat domain containing 4
FEZ1 fasciculation and elongation protein zeta 1 (zygin I)
FGF1 fibroblast growth factor 1 (acidic)
FGL1 fibrinogen-like 1
FIZ1 FLT3-interacting zinc finger 1
FLJ33360 FLJ33360 protein
FNTA farnesyltransferase, CAAX box, alpha
FNTB farnesyltransferase, CAAX box, beta
GEMIN8P4 gem (nuclear organelle) associated protein 8 pseudogene 4
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene
GINS3 GINS complex subunit 3 (Psf3 homolog)
GJB1 gap junction protein, beta 1, 32kDa
GLTP glycolipid transfer protein
GOLPH3 golgi phosphoprotein 3 (coat-protein)
GP9 glycoprotein IX (platelet)
GPBAR1 G protein-coupled bile acid receptor 1
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
GUSBP1 glucuronidase, beta pseudogene 1
HBA1 hemoglobin, alpha 1
HBD hemoglobin, delta
HBG1 hemoglobin, gamma A
HBG2 hemoglobin, gamma G
HBM hemoglobin, mu
HBZ hemoglobin, zeta
HEMGN hemogen
HIST1H4K histone cluster 1, H4k
HMGB4 high mobility group box 4
HPR haptoglobin-related protein
HSPB2 heat shock 27kDa protein 2
HTATSF1 HIV-1 Tat specific factor 1
IGF2BP2-AS1 IGF2BP2 antisense RNA 1
IGIP IgA-inducing protein
IL17D interleukin 17D
IL17RD interleukin 17 receptor D
IL19 interleukin 19
INSL6 insulin-like 6
IRX2 iroquois homeobox 2
JPH2 junctophilin 2
KANK4 KN motif and ankyrin repeat domains 4
KAZN kazrin, periplakin interacting protein
KCNG4 potassium channel, voltage gated modifier subfamily G, member 4
KLHL5 kelch-like family member 5
KLK12 kallikrein-related peptidase 12
KLK9 kallikrein-related peptidase 9
KRT19 keratin 19, type I
KRT24 keratin 24, type I
KRT74 keratin 74, type II
KRT83 keratin 83, type II
KRTAP5-8 keratin associated protein 5-8
LAMP1 lysosomal-associated membrane protein 1
LCN2 lipocalin 2
LINC00162 long intergenic non-protein coding RNA 162
LINC00341 long intergenic non-protein coding RNA 341
LINC00476 long intergenic non-protein coding RNA 476
LINC00479 long intergenic non-protein coding RNA 479
LITAF lipopolysaccharide-induced TNF factor
LOC285627 uncharacterized LOC285627
LOC340074 uncharacterized LOC340074
LOC400794 uncharacterized LOC400794
LOC643387 TAR DNA binding protein pseudogene
LOC646762 uncharacterized LOC646762
LOC728613 programmed cell death 6 pseudogene
MAGEB6 melanoma antigen family B6
MARCKSL1 MARCKS-like 1
MBP myelin basic protein
MED10 mediator complex subunit 10
METTL12 methyltransferase like 12
MIA2 melanoma inhibitory activity 2
MOBP myelin-associated oligodendrocyte basic protein
MOGAT1 monoacylglycerol O-acyltransferase 1
MPC1 mitochondrial pyruvate carrier 1
MROH8 maestro heat-like repeat family member 8
MRPL16 mitochondrial ribosomal protein L16
MRPL36 mitochondrial ribosomal protein L36
MRPL57 mitochondrial ribosomal protein L57
MRPS31 mitochondrial ribosomal protein S31
MRS2P2 MRS2 pseudogene 2
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
MTRF1L mitochondrial translational release factor 1-like
MUC16 mucin 16, cell surface associated
MYH14 myosin, heavy chain 14, non-muscle
NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa
NKAIN2 Na+/K+ transporting ATPase interacting 2
NR2E3 nuclear receptor subfamily 2, group E, member 3
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
NTSR2 neurotensin receptor 2
OAZ2 ornithine decarboxylase antizyme 2
OCM oncomodulin
OR11H6 olfactory receptor, family 11, subfamily H, member 6
OSR1 odd-skipped related transciption factor 1
PAAF1 proteasomal ATPase-associated factor 1
PACS2 phosphofurin acidic cluster sorting protein 2
PCSK6 proprotein convertase subtilisin/kexin type 6
PEX10 peroxisomal biogenesis factor 10
PGF placental growth factor
PIK3CD-AS1 PIK3CD antisense RNA 1
PINK1 PTEN induced putative kinase 1
PKD2L2 polycystic kidney disease 2-like 2
PLA2G16 phospholipase A2, group XVI
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
POLR2G polymerase (RNA) II (DNA directed) polypeptide G
POMP proteasome maturation protein
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
PPIAL4E peptidylprolyl isomerase A (cyclophilin A)-like 4E
PPP2R5A protein phosphatase 2, regulatory subunit B', alpha
PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
PTPN21 protein tyrosine phosphatase, non-receptor type 21
RAB1B RAB1B, member RAS oncogene family
RAB3IL1 RAB3A interacting protein (rabin3)-like 1
RBM11 RNA binding motif protein 11
RLN1 relaxin 1
RNF113B ring finger protein 113B
RNF126P1 ring finger protein 126 pseudogene 1
RNF130 ring finger protein 130
ROM1 retinal outer segment membrane protein 1
RPL13AP3 ribosomal protein L13a pseudogene 3
RPL23P8 ribosomal protein L23 pseudogene 8
RPS28 ribosomal protein S28
RTFDC1 replication termination factor 2 domain containing 1
SAP18 Sin3A-associated protein, 18kDa
SAR1A secretion associated, Ras related GTPase 1A
SCCPDH saccharopine dehydrogenase (putative)
SDSL serine dehydratase-like
SEPT2 septin 2
SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene)
SIX1 SIX homeobox 1
SLC22A12 solute carrier family 22 (organic anion/urate transporter), member 12
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SLFN14 schlafen family member 14
SNORA45B small nucleolar RNA, H/ACA box 45B
SNX19 sorting nexin 19
SNX20 sorting nexin 20
SNX31 sorting nexin 31
SPACA4 sperm acrosome associated 4
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SRSF8 serine/arginine-rich splicing factor 8
SUB1 SUB1 homolog (S. cerevisiae)
SUMO1P1 SUMO1 pseudogene 1
TAAR6 trace amine associated receptor 6
TARS threonyl-tRNA synthetase
TAS2R46 taste receptor, type 2, member 46
TEX12 testis expressed 12
TEX29 testis expressed 29
TEX30 testis expressed 30
TEX43 testis expressed 43
TFDP1 transcription factor Dp-1
TFEB transcription factor EB
TIMMDC1 translocase of inner mitochondrial membrane domain containing 1
TMC6 transmembrane channel-like 6
TMCO2 transmembrane and coiled-coil domains 2
TMCO3 transmembrane and coiled-coil domains 3
TMEM105 transmembrane protein 105
TMEM126B transmembrane protein 126B
TMEM178A transmembrane protein 178A
TMEM244 transmembrane protein 244
TMEM40 transmembrane protein 40
TMPRSS11F transmembrane protease, serine 11F
TMPRSS4 transmembrane protease, serine 4
TPI1P3 triosephosphate isomerase 1 pseudogene 3
TPRX1 tetra-peptide repeat homeobox 1
TRIM10 tripartite motif containing 10
TSPAN1 tetraspanin 1
TSPAN8 tetraspanin 8
TTLL8 tubulin tyrosine ligase-like family member 8
UBE2L3 ubiquitin-conjugating enzyme E2L 3
UFM1 ubiquitin-fold modifier 1
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
VTI1B vesicle transport through interaction with t-SNAREs 1B
WBP4 WW domain binding protein 4
WFDC2 WAP four-disulfide core domain 2
ZBTB3 zinc finger and BTB domain containing 3
ZBTB8A zinc finger and BTB domain containing 8A
ZDHHC19 zinc finger, DHHC-type containing 19
ZNF350 zinc finger protein 350
ZPBP2 zona pellucida binding protein 2

low expression

Symbol Name
GON4L gon-4-like (C. elegans)
KBTBD4 kelch repeat and BTB (POZ) domain containing 4