Brain Lower Grade Glioma_LGG_TCGA-P5-A731-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

225 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-P5-A731-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2
ACHE acetylcholinesterase (Yt blood group)
ACSM5 acyl-CoA synthetase medium-chain family member 5
ACTA2 actin, alpha 2, smooth muscle, aorta
ACTG2 actin, gamma 2, smooth muscle, enteric
ADCY8 adenylate cyclase 8 (brain)
ADGRG7 adhesion G protein-coupled receptor G7
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide
AGK acylglycerol kinase
AGTR2 angiotensin II receptor, type 2
AK8 adenylate kinase 8
AKTIP AKT interacting protein
AMT aminomethyltransferase
ARMC10 armadillo repeat containing 10
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa
ASIC5 acid sensing (proton gated) ion channel family member 5
ATG4A autophagy related 4A, cysteine peptidase
ATP5J2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
ATP6V0E2 ATPase, H+ transporting V0 subunit e2
B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
BET1 Bet1 golgi vesicular membrane trafficking protein
BPGM 2,3-bisphosphoglycerate mutase
BPIFA4P BPI fold containing family A, member 4, pseudogene
BPIFC BPI fold containing family C
BSPRY B-box and SPRY domain containing
C10ORF131 chromosome 10 open reading frame 131
C11ORF16 chromosome 11 open reading frame 16
C12ORF54 chromosome 12 open reading frame 54
C16ORF90 chromosome 16 open reading frame 90
C1ORF94 chromosome 1 open reading frame 94
C20ORF166-AS1 C20orf166 antisense RNA 1
C2ORF78 chromosome 2 open reading frame 78
C3P1 complement component 3 precursor pseudogene
C5ORF46 chromosome 5 open reading frame 46
C5ORF52 chromosome 5 open reading frame 52
CALD1 caldesmon 1
CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle)
CCDC163P coiled-coil domain containing 163, pseudogene
CCDC85A coiled-coil domain containing 85A
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CLEC3A C-type lectin domain family 3, member A
CLRN1-AS1 CLRN1 antisense RNA 1
CMBL carboxymethylenebutenolidase homolog (Pseudomonas)
CNOT4 CCR4-NOT transcription complex, subunit 4
CNPY4 canopy FGF signaling regulator 4
COL12A1 collagen, type XII, alpha 1
COPS6 COP9 signalosome subunit 6
COX6C cytochrome c oxidase subunit VIc
COX7B2 cytochrome c oxidase subunit VIIb2
CPSF4 cleavage and polyadenylation specific factor 4, 30kDa
CTAGE6 CTAGE family, member 6
CYP2J2 cytochrome P450, family 2, subfamily J, polypeptide 2
CYP8B1 cytochrome P450, family 8, subfamily B, polypeptide 1
DEFB103B defensin, beta 103B
DFNA5 deafness, autosomal dominant 5
DMRTC1 DMRT-like family C1
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNAL4 dynein, axonemal, light chain 4
DOK5 docking protein 5
DPPA2 developmental pluripotency associated 2
DRD5 dopamine receptor D5
EDA2R ectodysplasin A2 receptor
EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
ERO1LB ERO1-like beta (S. cerevisiae)
EXOC4 exocyst complex component 4
FABP12 fatty acid binding protein 12
FAM200A family with sequence similarity 200, member A
FAM86B1 family with sequence similarity 86, member B1
FAM86B2 family with sequence similarity 86, member B2
FBXO24 F-box protein 24
FCN3 ficolin (collagen/fibrinogen domain containing) 3
FDXR ferredoxin reductase
FER1L4 fer-1-like family member 4, pseudogene (functional)
FST follistatin
FXN frataxin
GABRE gamma-aminobutyric acid (GABA) A receptor, epsilon
GABRG1 gamma-aminobutyric acid (GABA) A receptor, gamma 1
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11
GATS GATS, stromal antigen 3 opposite strand
GBP4 guanylate binding protein 4
GJA10 gap junction protein, alpha 10, 62kDa
GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2
GRIA1 glutamate receptor, ionotropic, AMPA 1
GSTT1 glutathione S-transferase theta 1
GTF2A1L general transcription factor IIA, 1-like
GUCA1A guanylate cyclase activator 1A (retina)
H2BFWT H2B histone family, member W, testis-specific
HMHB1 histocompatibility (minor) HB-1
HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled
IFRD1 interferon-related developmental regulator 1
IL17D interleukin 17D
IL3 interleukin 3
IL7 interleukin 7
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KRTAP1-1 keratin associated protein 1-1
KRTAP3-3 keratin associated protein 3-3
LALBA lactalbumin, alpha-
LAPTM4A lysosomal protein transmembrane 4 alpha
LINC00114 long intergenic non-protein coding RNA 114
LINC00238 long intergenic non-protein coding RNA 238
LINC00271 long intergenic non-protein coding RNA 271
LINC00515 long intergenic non-protein coding RNA 515
LINC00589 long intergenic non-protein coding RNA 589
LINC01587 long intergenic non-protein coding RNA 1587
LIPI lipase, member I
LOC340074 uncharacterized LOC340074
LOC728743 zinc finger protein pseudogene
LOX lysyl oxidase
LRWD1 leucine-rich repeats and WD repeat domain containing 1
LY6G6F lymphocyte antigen 6 complex, locus G6F
MAGEA4 melanoma antigen family A4
MC4R melanocortin 4 receptor
MIR1-1HG MIR1-1 host gene
MIR7-3HG MIR7-3 host gene
MKRN1 makorin ring finger protein 1
MMP13 matrix metallopeptidase 13
MMP9 matrix metallopeptidase 9
MRGPRX3 MAS-related GPR, member X3
MRGPRX4 MAS-related GPR, member X4
MRPS33 mitochondrial ribosomal protein S33
MT1F metallothionein 1F
MT3 metallothionein 3
MT4 metallothionein 4
MXRA7 matrix-remodelling associated 7
MYEOV2 myeloma overexpressed 2
MYL10 myosin, light chain 10, regulatory
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit
NAP1L6 nucleosome assembly protein 1-like 6
NME7 NME/NM23 family member 7
NOX3 NADPH oxidase 3
NUB1 negative regulator of ubiquitin-like proteins 1
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7
OARD1 O-acyl-ADP-ribose deacylase 1
ODF4 outer dense fiber of sperm tails 4
OR51E1 olfactory receptor, family 51, subfamily E, member 1
OR52N4 olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)
OR5K2 olfactory receptor, family 5, subfamily K, member 2
OR9I1 olfactory receptor, family 9, subfamily I, member 1
PAGE4 P antigen family, member 4 (prostate associated)
PCDHGA6 protocadherin gamma subfamily A, 6
PCDHGA8 protocadherin gamma subfamily A, 8
PCDHGB4 protocadherin gamma subfamily B, 4
PDAP1 PDGFA associated protein 1
PDZD9 PDZ domain containing 9
PEX11A peroxisomal biogenesis factor 11 alpha
PEX7 peroxisomal biogenesis factor 7
PFN3 profilin 3
PITHD1 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
PLA2G2C phospholipase A2, group IIC
PLCH1 phospholipase C, eta 1
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3
PLIN1 perilipin 1
PLVAP plasmalemma vesicle associated protein
PMPCB peptidase (mitochondrial processing) beta
PNP purine nucleoside phosphorylase
POM121L2 POM121 transmembrane nucleoporin-like 2
PON1 paraoxonase 1
PON2 paraoxonase 2
POTEG POTE ankyrin domain family, member G
PPIAL4E peptidylprolyl isomerase A (cyclophilin A)-like 4E
PRAMEF8 PRAME family member 8
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
PRLHR prolactin releasing hormone receptor
PRTN3 proteinase 3
PSG3 pregnancy specific beta-1-glycoprotein 3
PSMA8 proteasome (prosome, macropain) subunit, alpha type, 8
PSMB11 proteasome (prosome, macropain) subunit, beta type, 11
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2
PTCD1 pentatricopeptide repeat domain 1
PTCHD4 patched domain containing 4
RAB1A RAB1A, member RAS oncogene family
RAB41 RAB41, member RAS oncogene family
RAVER2 ribonucleoprotein, PTB-binding 2
RETN resistin
RHEB Ras homolog enriched in brain
RTL1 retrotransposon-like 1
SCGB1D4 secretoglobin, family 1D, member 4
SDHAF3 succinate dehydrogenase complex assembly factor 3
SERPINA9 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
SFTPD surfactant protein D
SHFM1 split hand/foot malformation (ectrodactyly) type 1
SLC14A1 solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4
SLC30A8 solute carrier family 30 (zinc transporter), member 8
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
SLC52A1 solute carrier family 52 (riboflavin transporter), member 1
SNORA66 small nucleolar RNA, H/ACA box 66
SNORA70 small nucleolar RNA, H/ACA box 70
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
SORD sorbitol dehydrogenase
SOST sclerostin
SPAG11B sperm associated antigen 11B
SPINK2 serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)
STARD7 StAR-related lipid transfer (START) domain containing 7
STX19 syntaxin 19
SYCP3 synaptonemal complex protein 3
TAC1 tachykinin, precursor 1
TAC3 tachykinin 3
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
TAS2R1 taste receptor, type 2, member 1
TH tyrosine hydroxylase
TMEM106C transmembrane protein 106C
TMEM133 transmembrane protein 133
TMEM176A transmembrane protein 176A
TMEM176B transmembrane protein 176B
TPRXL tetra-peptide repeat homeobox-like
TRIM4 tripartite motif containing 4
TSLP thymic stromal lymphopoietin
TSPAN16 tetraspanin 16
TST thiosulfate sulfurtransferase (rhodanese)
VANGL2 VANGL planar cell polarity protein 2
VRTN vertebrae development associated
VWCE von Willebrand factor C and EGF domains
WFDC11 WAP four-disulfide core domain 11
XPC xeroderma pigmentosum, complementation group C
YIPF7 Yip1 domain family, member 7
ZC3HC1 zinc finger, C3HC-type containing 1
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZNF212 zinc finger protein 212
ZP1 zona pellucida glycoprotein 1 (sperm receptor)
ZSCAN21 zinc finger and SCAN domain containing 21

low expression

Symbol Name
ZNF747 zinc finger protein 747