Brain Lower Grade Glioma_LGG_TCGA-P5-A5F0-01A-11R-A28M-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

370 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-P5-A5F0-01A-11R-A28M-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ACER1 alkaline ceramidase 1
ACTL6B actin-like 6B
ADAM20 ADAM metallopeptidase domain 20
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6
ADRBK2 adrenergic, beta, receptor kinase 2
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AMER3 APC membrane recruitment protein 3
AMZ1 archaelysin family metallopeptidase 1
ANGEL1 angel homolog 1 (Drosophila)
ANKRD29 ankyrin repeat domain 29
ANKRD30B ankyrin repeat domain 30B
ANKRD36B ankyrin repeat domain 36B
APOA5 apolipoprotein A-V
ATOH7 atonal homolog 7 (Drosophila)
ATP6V0E2 ATPase, H+ transporting V0 subunit e2
BLCAP bladder cancer associated protein
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BRSK2 BR serine/threonine kinase 2
BSPH1 binder of sperm protein homolog 1
BZRAP1 benzodiazepine receptor (peripheral) associated protein 1
C10ORF113 chromosome 10 open reading frame 113
C10ORF82 chromosome 10 open reading frame 82
C15ORF53 chromosome 15 open reading frame 53
C15ORF62 chromosome 15 open reading frame 62
C16ORF82 chromosome 16 open reading frame 82
C19ORF26 chromosome 19 open reading frame 26
C20ORF144 chromosome 20 open reading frame 144
C5ORF52 chromosome 5 open reading frame 52
C7ORF71 chromosome 7 open reading frame 71
C9ORF172 chromosome 9 open reading frame 172
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
CAMK4 calcium/calmodulin-dependent protein kinase IV
CAMSAP3 calmodulin regulated spectrin-associated protein family, member 3
CAPN11 calpain 11
CASD1 CAS1 domain containing 1
CASKIN1 CASK interacting protein 1
CCDC144A coiled-coil domain containing 144A
CCDC183 coiled-coil domain containing 183
CDH9 cadherin 9, type 2 (T1-cadherin)
CELF3 CUGBP, Elav-like family member 3
CELF4 CUGBP, Elav-like family member 4
CELF5 CUGBP, Elav-like family member 5
CELF6 CUGBP, Elav-like family member 6
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3
CHD3 chromodomain helicase DNA binding protein 3
CLDN16 claudin 16
CLDN17 claudin 17
CLIP2 CAP-GLY domain containing linker protein 2
CLVS1 clavesin 1
CNGB1 cyclic nucleotide gated channel beta 1
CNIH2 cornichon family AMPA receptor auxiliary protein 2
CNTNAP2 contactin associated protein-like 2
COG1 component of oligomeric golgi complex 1
CPB2 carboxypeptidase B2 (plasma)
CPNE4 copine IV
CPNE5 copine V
CPNE7 copine VII
CREB3L1 cAMP responsive element binding protein 3-like 1
CRH corticotropin releasing hormone
CSMD1 CUB and Sushi multiple domains 1
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CT55 cancer/testis antigen 55
CT62 cancer/testis antigen 62
CT83 cancer/testis antigen 83
CTAG1B cancer/testis antigen 1B
CTAG2 cancer/testis antigen 2
CYMP chymosin pseudogene
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7
CYP4A22 cytochrome P450, family 4, subfamily A, polypeptide 22
DAGLA diacylglycerol lipase, alpha
DCAF12L2 DDB1 and CUL4 associated factor 12-like 2
DISP2 dispatched homolog 2 (Drosophila)
DMRTC1 DMRT-like family C1
DMXL2 Dmx-like 2
DNAH1 dynein, axonemal, heavy chain 1
DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5
DOK5 docking protein 5
EFHD2 EF-hand domain family, member D2
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1
ELK1 ELK1, member of ETS oncogene family
EME2 essential meiotic structure-specific endonuclease subunit 2
EVI5L ecotropic viral integration site 5-like
FAHD1 fumarylacetoacetate hydrolase domain containing 1
FAM106CP family with sequence similarity 106, member C, pseudogene
FAM131B family with sequence similarity 131, member B
FAM153B family with sequence similarity 153, member B
FAM171A2 family with sequence similarity 171, member A2
FAM19A2 family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
FAM66A family with sequence similarity 66, member A
FAM66E family with sequence similarity 66, member E
FAM71C family with sequence similarity 71, member C
FAM90A7P putative protein FAM90A7
FBXL16 F-box and leucine-rich repeat protein 16
FBXO47 F-box protein 47
FEZF2 FEZ family zinc finger 2
FLJ34503 uncharacterized FLJ34503
FLJ41941 uncharacterized LOC100192420
FMR1-AS1 FMR1 antisense RNA 1
FOXD4L6 forkhead box D4-like 6
FRMPD1 FERM and PDZ domain containing 1
FSCB fibrous sheath CABYR binding protein
FTHL17 ferritin, heavy polypeptide-like 17
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GAL3ST3 galactose-3-O-sulfotransferase 3
GDF2 growth differentiation factor 2
GLRA2 glycine receptor, alpha 2
GLYCTK glycerate kinase
GOLGA6D golgin A6 family, member D
GPD1L glycerol-3-phosphate dehydrogenase 1-like
GPR148 G protein-coupled receptor 148
GPR151 G protein-coupled receptor 151
GPR45 G protein-coupled receptor 45
GPR52 G protein-coupled receptor 52
GPR78 G protein-coupled receptor 78
GPRIN1 G protein regulated inducer of neurite outgrowth 1
GPRIN2 G protein regulated inducer of neurite outgrowth 2
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D
GRM2 glutamate receptor, metabotropic 2
GRM5 glutamate receptor, metabotropic 5
GUCY1A3 guanylate cyclase 1, soluble, alpha 3
HCN3 hyperpolarization activated cyclic nucleotide gated potassium channel 3
HCRTR1 hypocretin (orexin) receptor 1
HHIPL1 HHIP-like 1
HPCA hippocalcin
HRH3 histamine receptor H3
IDS iduronate 2-sulfatase
INTS1 integrator complex subunit 1
IQCF1 IQ motif containing F1
IQCJ IQ motif containing J
IQSEC3 IQ motif and Sec7 domain 3
ISLR2 immunoglobulin superfamily containing leucine-rich repeat 2
IZUMO2 IZUMO family member 2
JPH3 junctophilin 3
JPH4 junctophilin 4
KCNH7 potassium channel, voltage gated eag related subfamily H, member 7
KCNIP2 Kv channel interacting protein 2
KCNK3 potassium channel, two pore domain subfamily K, member 3
KIAA1456 KIAA1456
KIAA1614 KIAA1614
KIF5A kinesin family member 5A
KIF5C kinesin family member 5C
KLK15 kallikrein-related peptidase 15
KRT3 keratin 3, type II
KRT31 keratin 31, type I
KRT33B keratin 33B, type I
KRT81 keratin 81, type II
KRTAP5-2 keratin associated protein 5-2
L1CAM L1 cell adhesion molecule
L3MBTL1 l(3)mbt-like 1 (Drosophila)
LCAT lecithin-cholesterol acyltransferase
LDHAL6A lactate dehydrogenase A-like 6A
LINC00202-1 long intergenic non-protein coding RNA 202-1
LINC00238 long intergenic non-protein coding RNA 238
LINC00596 long intergenic non-protein coding RNA 596
LINC01547 long intergenic non-protein coding RNA 1547
LINGO1 leucine rich repeat and Ig domain containing 1
LINGO3 leucine rich repeat and Ig domain containing 3
LMTK2 lemur tyrosine kinase 2
LOC100128076 protein tyrosine phosphatase pseudogene
LOC100128554 uncharacterized LOC100128554
LOC148696 uncharacterized LOC148696
LOC285696 uncharacterized LOC285696
LOC613037 nuclear pore complex interacting protein pseudogene
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
LRRC16B leucine rich repeat containing 16B
LRRC20 leucine rich repeat containing 20
LRRC4 leucine rich repeat containing 4
LRRIQ4 leucine-rich repeats and IQ motif containing 4
LY6G6E lymphocyte antigen 6 complex, locus G6E (pseudogene)
MAGEB3 melanoma antigen family B3
MAGEL2 melanoma antigen family L2
MAP3K13 mitogen-activated protein kinase kinase kinase 13
MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3
MAPKBP1 mitogen-activated protein kinase binding protein 1
MARCH4 membrane-associated ring finger (C3HC4) 4, E3 ubiquitin protein ligase
MAST1 microtubule associated serine/threonine kinase 1
MB myoglobin
MC4R melanocortin 4 receptor
MCF2L MCF.2 cell line derived transforming sequence-like
MEP1B meprin A, beta
MGC27382 uncharacterized MGC27382
MIAT myocardial infarction associated transcript (non-protein coding)
MMD2 monocyte to macrophage differentiation-associated 2
MROH1 maestro heat-like repeat family member 1
MS4A8 membrane-spanning 4-domains, subfamily A, member 8
MST1R macrophage stimulating 1 receptor
MTNR1A melatonin receptor 1A
MYOG myogenin (myogenic factor 4)
NANOG Nanog homeobox
NAP1L3 nucleosome assembly protein 1-like 3
NAT16 N-acetyltransferase 16 (GCN5-related, putative)
NDRG4 NDRG family member 4
NELL1 NEL-like 1 (chicken)
NEURL1B neuralized E3 ubiquitin protein ligase 1B
NEUROD1 neuronal differentiation 1
NPFFR2 neuropeptide FF receptor 2
NRG1 neuregulin 1
NRXN2 neurexin 2
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor
NXPH1 neurexophilin 1
NXPH3 neurexophilin 3
OCLM oculomedin
OR11H1 olfactory receptor, family 11, subfamily H, member 1
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene)
OR2T6 olfactory receptor, family 2, subfamily T, member 6
OR2T8 olfactory receptor, family 2, subfamily T, member 8
OR4M2 olfactory receptor, family 4, subfamily M, member 2
OR51B4 olfactory receptor, family 51, subfamily B, member 4
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OR52W1 olfactory receptor, family 52, subfamily W, member 1
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OTOP1 otopetrin 1
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PCDHA1 protocadherin alpha 1
PCDHA6 protocadherin alpha 6
PCDHB18P protocadherin beta 18 pseudogene
PCDHB19P protocadherin beta 19 pseudogene
PCDHB8 protocadherin beta 8
PCDHGB5 protocadherin gamma subfamily B, 5
PCDHGB6 protocadherin gamma subfamily B, 6
PCDHGC4 protocadherin gamma subfamily C, 4
PCSK2 proprotein convertase subtilisin/kexin type 2
PDE2A phosphodiesterase 2A, cGMP-stimulated
PDE4A phosphodiesterase 4A, cAMP-specific
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2
PIGZ phosphatidylinositol glycan anchor biosynthesis, class Z
PIP5KL1 phosphatidylinositol-4-phosphate 5-kinase-like 1
PKD1 polycystic kidney disease 1 (autosomal dominant)
PKD2L2 polycystic kidney disease 2-like 2
PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha
PLA2G4D phospholipase A2, group IVD (cytosolic)
PLCH1 phospholipase C, eta 1
PLCXD2 phosphatidylinositol-specific phospholipase C, X domain containing 2
PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
PLGLB2 plasminogen-like B2
PLXNA1 plexin A1
PMS2CL PMS2 C-terminal like pseudogene
POLR2J3 polymerase (RNA) II (DNA directed) polypeptide J3
PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
PPIP5K1 diphosphoinositol pentakisphosphate kinase 1
PQLC2L PQ loop repeat containing 2-like
PRAMEF1 PRAME family member 1
PRAMEF10 PRAME family member 10
PRB3 proline-rich protein BstNI subfamily 3
PRG1 p53-responsive gene 1
PROM2 prominin 2
PRR5-ARHGAP8 PRR5-ARHGAP8 readthrough
PRRT4 proline-rich transmembrane protein 4
PSD pleckstrin and Sec7 domain containing
PTGFR prostaglandin F receptor (FP)
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2
PWRN2 Prader-Willi region non-protein coding RNA 2
RAB40AL RAB40A, member RAS oncogene family-like
RAI1 retinoic acid induced 1
RALGPS1 Ral GEF with PH domain and SH3 binding motif 1
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RASA4 RAS p21 protein activator 4
RASA4CP RAS p21 protein activator 4C, pseudogene
RASAL2 RAS protein activator like 2
RASD2 RASD family, member 2
REC114 REC114 meiotic recombination protein
RFPL1 ret finger protein-like 1
RHBDL1 rhomboid, veinlet-like 1 (Drosophila)
RIT2 Ras-like without CAAX 2
RNF216P1 ring finger protein 216 pseudogene 1
RNF44 ring finger protein 44
RPS6KL1 ribosomal protein S6 kinase-like 1
RTBDN retbindin
RTN4R reticulon 4 receptor
RTN4RL2 reticulon 4 receptor-like 2
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
RXFP1 relaxin/insulin-like family peptide receptor 1
SBF1 SET binding factor 1
SCEL sciellin
SCGB1C1 secretoglobin, family 1C, member 1
SCN3B sodium channel, voltage gated, type III beta subunit
SCRT1 scratch family zinc finger 1
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
SEPT7P9 septin 7 pseudogene 9
SEZ6 seizure related 6 homolog (mouse)
SEZ6L2 seizure related 6 homolog (mouse)-like 2
SGSM2 small G protein signaling modulator 2
SHANK1 SH3 and multiple ankyrin repeat domains 1
SHANK2 SH3 and multiple ankyrin repeat domains 2
SHANK3 SH3 and multiple ankyrin repeat domains 3
SHC3 SHC (Src homology 2 domain containing) transforming protein 3
SHISA6 shisa family member 6
SHISA9 shisa family member 9
SLC25A22 solute carrier family 25 (mitochondrial carrier: glutamate), member 22
SLC26A1 solute carrier family 26 (anion exchanger), member 1
SLC26A8 solute carrier family 26 (anion exchanger), member 8
SLC5A8 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8
SLC8A3 solute carrier family 8 (sodium/calcium exchanger), member 3
SMIM21 small integral membrane protein 21
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
SNORA78 small nucleolar RNA, H/ACA box 78
SNORA81 small nucleolar RNA, H/ACA box 81
SNORD115-13 small nucleolar RNA, C/D box 115-13
SNORD115-26 small nucleolar RNA, C/D box 115-26
SNORD116-28 small nucleolar RNA, C/D box 116-28
SPHKAP SPHK1 interactor, AKAP domain containing
SPRR2G small proline-rich protein 2G
SRRM3 serine/arginine repetitive matrix 3
SSPO SCO-spondin
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STAG3L1 stromal antigen 3-like 1 (pseudogene)
STAG3L4 stromal antigen 3-like 4 (pseudogene)
STMN3 stathmin-like 3
SYCE1 synaptonemal complex central element protein 1
SYN1 synapsin I
SYNGAP1 synaptic Ras GTPase activating protein 1
SYT15 synaptotagmin XV
SYT17 synaptotagmin XVII
SYT8 synaptotagmin VIII
SYTL5 synaptotagmin-like 5
TACC2 transforming, acidic coiled-coil containing protein 2
TAOK2 TAO kinase 2
TAS2R50 taste receptor, type 2, member 50
TAS2R9 taste receptor, type 2, member 9
TBC1D24 TBC1 domain family, member 24
TCP10 t-complex 10
TECPR1 tectonin beta-propeller repeat containing 1
TINCR tissue differentiation-inducing non-protein coding RNA
TMC3 transmembrane channel-like 3
TMEM132E transmembrane protein 132E
TMEM151B transmembrane protein 151B
TMEM196 transmembrane protein 196
TMEM35 transmembrane protein 35
TMEM63C transmembrane protein 63C
TNN tenascin N
TNRC18 trinucleotide repeat containing 18
TPH2 tryptophan hydroxylase 2
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1
TRAF3 TNF receptor-associated factor 3
TRIM17 tripartite motif containing 17
TRIM3 tripartite motif containing 3
TRIM67 tripartite motif containing 67
TRPC7 transient receptor potential cation channel, subfamily C, member 7
TSPAN11 tetraspanin 11
TSPAN13 tetraspanin 13
TSPYL6 TSPY-like 6
TTC7B tetratricopeptide repeat domain 7B
TTC8 tetratricopeptide repeat domain 8
TTTY23 testis-specific transcript, Y-linked 23 (non-protein coding)
TUBBP5 tubulin, beta pseudogene 5
UCKL1-AS1 UCKL1 antisense RNA 1
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
UNC119 unc-119 homolog (C. elegans)
UNC13C unc-13 homolog C (C. elegans)
UNC79 unc-79 homolog (C. elegans)
UPK3BL uroplakin 3B-like
USP17L2 ubiquitin specific peptidase 17-like family member 2
VWA5B2 von Willebrand factor A domain containing 5B2
VWC2L von Willebrand factor C domain containing protein 2-like
WDR17 WD repeat domain 17
WDR86 WD repeat domain 86
XKR7 XK, Kell blood group complex subunit-related family, member 7
ZDHHC11 zinc finger, DHHC-type containing 11
ZDHHC21 zinc finger, DHHC-type containing 21
ZMIZ2 zinc finger, MIZ-type containing 2
ZNF382 zinc finger protein 382
ZNF449 zinc finger protein 449
ZNF786 zinc finger protein 786
ZNF815P zinc finger protein 815, pseudogene

low expression

Symbol Name
PWP1 PWP1 homolog (S. cerevisiae)
SOWAHC sosondowah ankyrin repeat domain family member C