Brain Lower Grade Glioma_LGG_TCGA-HW-A5KL-01A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

173 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HW-A5KL-01A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADAT aminoadipate aminotransferase
ABLIM3 actin binding LIM protein family, member 3
ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif, 19
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ADD3 adducin 3 (gamma)
ADORA2A-AS1 ADORA2A antisense RNA 1
ANKRD28 ankyrin repeat domain 28
ANKRD36B ankyrin repeat domain 36B
ANTXR1 anthrax toxin receptor 1
BIVM basic, immunoglobulin-like variable motif containing
C20ORF203 chromosome 20 open reading frame 203
C9ORF131 chromosome 9 open reading frame 131
CASP9 caspase 9, apoptosis-related cysteine peptidase
CCDC79 coiled-coil domain containing 79
CCSER2 coiled-coil serine-rich protein 2
CCT8L2 chaperonin containing TCP1, subunit 8 (theta)-like 2
CDK8 cyclin-dependent kinase 8
CDRT4 CMT1A duplicated region transcript 4
CGB1 chorionic gonadotropin, beta polypeptide 1
CLHC1 clathrin heavy chain linker domain containing 1
CROCCP3 ciliary rootlet coiled-coil, rootletin pseudogene 3
CT55 cancer/testis antigen 55
DEFB124 defensin, beta 124
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DOPEY1 dopey family member 1
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2
FAM136BP family with sequence similarity 136, member B, pseudogene
FAM92A1P2 family with sequence similarity 92, member A3
FGF17 fibroblast growth factor 17
FMR1NB fragile X mental retardation 1 neighbor
FOXD4L5 forkhead box D4-like 5
FRAT2 frequently rearranged in advanced T-cell lymphomas 2
FSD1L fibronectin type III and SPRY domain containing 1-like
GALNT8 polypeptide N-acetylgalactosaminyltransferase 8
GHSR growth hormone secretagogue receptor
GINS3 GINS complex subunit 3 (Psf3 homolog)
GK2 glycerol kinase 2
GLIS1 GLIS family zinc finger 1
GNMT glycine N-methyltransferase
GOLGA2P3Y golgin A2 pseudogene 3, Y-linked
GOLGA6L10 golgin A6 family-like 10
GOLGA6L5P golgin A6 family-like 5, pseudogene
GOLGA6L9 golgin A6 family-like 9
GPR148 G protein-coupled receptor 148
GPR27 G protein-coupled receptor 27
GSC2 goosecoid homeobox 2
GUSBP4 glucuronidase, beta pseudogene 4
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
HIPK2 homeodomain interacting protein kinase 2
HMGB3P1 high mobility group box 3 pseudogene 1
IGIP IgA-inducing protein
IGSF1 immunoglobulin superfamily, member 1
IL4 interleukin 4
IL9 interleukin 9
IPW imprinted in Prader-Willi syndrome (non-protein coding)
JARID2 jumonji, AT rich interactive domain 2
KANSL1L KAT8 regulatory NSL complex subunit 1-like
KCNG2 potassium channel, voltage gated modifier subfamily G, member 2
KLHL5 kelch-like family member 5
KLK14 kallikrein-related peptidase 14
KNOP1 lysine-rich nucleolar protein 1
LENG8 leukocyte receptor cluster (LRC) member 8
LINC00051 long intergenic non-protein coding RNA 51
LINC00319 long intergenic non-protein coding RNA 319
LRRC19 leucine rich repeat containing 19
LRRC37A leucine rich repeat containing 37A
LUZP2 leucine zipper protein 2
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAP4 microtubule-associated protein 4
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4
MASP2 mannan-binding lectin serine peptidase 2
MEP1B meprin A, beta
MIR17HG miR-17-92 cluster host gene
MPDZ multiple PDZ domain protein
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MT1IP metallothionein 1I, pseudogene
MYEF2 myelin expression factor 2
MYO1H myosin IH
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NBPF9 neuroblastoma breakpoint family, member 9
NCOR2 nuclear receptor corepressor 2
NEK7 NIMA-related kinase 7
NKTR natural killer cell triggering receptor
NLRP2 NLR family, pyrin domain containing 2
NLRP7 NLR family, pyrin domain containing 7
NR2C1 nuclear receptor subfamily 2, group C, member 1
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NUDT9P1 nudix (nucleoside diphosphate linked moiety X)-type motif 9 pseudogene 1
OCLM oculomedin
OR10G2 olfactory receptor, family 10, subfamily G, member 2
OR10H3 olfactory receptor, family 10, subfamily H, member 3
OR1B1 olfactory receptor, family 1, subfamily B, member 1 (gene/pseudogene)
OR52A4P olfactory receptor, family 52, subfamily A, member 4, pseudogene
OR7E91P olfactory receptor, family 7, subfamily E, member 91 pseudogene
OXT oxytocin/neurophysin I prepropeptide
PAGE2 P antigen family, member 2 (prostate associated)
PAXBP1 PAX3 and PAX7 binding protein 1
PCDH15 protocadherin-related 15
PCDHA7 protocadherin alpha 7
PCDHGA3 protocadherin gamma subfamily A, 3
PCDHGB4 protocadherin gamma subfamily B, 4
PEG3-AS1 PEG3 antisense RNA 1
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PINK1 PTEN induced putative kinase 1
PKD2L2 polycystic kidney disease 2-like 2
PLRG1 pleiotropic regulator 1
PPY2P pancreatic polypeptide 2, pseudogene
PROM2 prominin 2
PRTG protogenin
PSG3 pregnancy specific beta-1-glycoprotein 3
PTPN21 protein tyrosine phosphatase, non-receptor type 21
PWAR5 Prader Willi/Angelman region RNA 5
RAP2A RAP2A, member of RAS oncogene family
RBM5 RNA binding motif protein 5
RBM6 RNA binding motif protein 6
RBMXL1 RNA binding motif protein, X-linked-like 1
RGAG1 retrotransposon gag domain containing 1
RICTOR RPTOR independent companion of MTOR, complex 2
RNF151 ring finger protein 151
RPS26P11 ribosomal protein S26 pseudogene 11
SAP18 Sin3A-associated protein, 18kDa
SCARNA21 small Cajal body-specific RNA 21
SCGB2B2 secretoglobin, family 2B, member 2
SEC31B SEC31 homolog B (S. cerevisiae)
SEPT2 septin 2
SETD5 SET domain containing 5
SIX4 SIX homeobox 4
SLC25A51P1 solute carrier family 25, member 51 pseudogene 1
SLC35E2 solute carrier family 35, member E2
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SNORA44 small nucleolar RNA, H/ACA box 44
SNORA72 small nucleolar RNA, H/ACA box 72
SNORD116-28 small nucleolar RNA, C/D box 116-28
SYCP2L synaptonemal complex protein 2-like
TBC1D26 TBC1 domain family, member 26
TBC1D3 TBC1 domain family, member 3
TBC1D3H TBC1 domain family, member 3H
TBPL2 TATA box binding protein like 2
TMC1 transmembrane channel-like 1
TMEM236 transmembrane protein 236
TRAK2 trafficking protein, kinesin binding 2
TRIM41 tripartite motif containing 41
TRIM50 tripartite motif containing 50
TSHR thyroid stimulating hormone receptor
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UBL4B ubiquitin-like 4B
UBR4 ubiquitin protein ligase E3 component n-recognin 4
UGT1A7 UDP glucuronosyltransferase 1 family, polypeptide A7
URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase
USP17L6P ubiquitin specific peptidase 17-like family member 6, pseudogene
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
VWCE von Willebrand factor C and EGF domains
WASF3 WAS protein family, member 3
ZAN zonadhesin (gene/pseudogene)
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZFYVE16 zinc finger, FYVE domain containing 16
ZNF154 zinc finger protein 154
ZNF285 zinc finger protein 285
ZNF326 zinc finger protein 326
ZNF419 zinc finger protein 419
ZNF431 zinc finger protein 431
ZNF551 zinc finger protein 551
ZNF583 zinc finger protein 583
ZNF621 zinc finger protein 621
ZNF664 zinc finger protein 664
ZNF77 zinc finger protein 77
ZNF814 zinc finger protein 814
ZNF84 zinc finger protein 84

low expression

Symbol Name
EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
SARAF store-operated calcium entry-associated regulatory factor
THEM4 thioesterase superfamily member 4
THUMPD2 THUMP domain containing 2