Brain Lower Grade Glioma_LGG_TCGA-HW-8320-01A-11R-2404-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

172 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HW-8320-01A-11R-2404-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABI3BP ABI family, member 3 (NESH) binding protein
ACER1 alkaline ceramidase 1
ADAM7 ADAM metallopeptidase domain 7
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
AFAP1 actin filament associated protein 1
AHNAK AHNAK nucleoprotein
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
AMER1 APC membrane recruitment protein 1
ANKRD13A ankyrin repeat domain 13A
ANKRD28 ankyrin repeat domain 28
ANKRD30A ankyrin repeat domain 30A
AR androgen receptor
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like
ARID1A AT rich interactive domain 1A (SWI-like)
ARL5C ADP-ribosylation factor-like 5C
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide
BAZ2A bromodomain adjacent to zinc finger domain, 2A
BCORP1 BCL6 corepressor pseudogene 1
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
C20ORF173 chromosome 20 open reading frame 173
C6ORF89 chromosome 6 open reading frame 89
CASP9 caspase 9, apoptosis-related cysteine peptidase
CCDC50 coiled-coil domain containing 50
CCL3 chemokine (C-C motif) ligand 3
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCL3L3 chemokine (C-C motif) ligand 3-like 3
CCL4 chemokine (C-C motif) ligand 4
CCL4L2 chemokine (C-C motif) ligand 4-like 2
CD38 CD38 molecule
CD82 CD82 molecule
CDH15 cadherin 15, type 1, M-cadherin (myotubule)
CDK15 cyclin-dependent kinase 15
CDV3 CDV3 homolog (mouse)
CEP83 centrosomal protein 83kDa
CH25H cholesterol 25-hydroxylase
CHD2 chromodomain helicase DNA binding protein 2
COL6A4P2 collagen, type VI, alpha 4 pseudogene 2
CPS1 carbamoyl-phosphate synthase 1, mitochondrial
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CSF1 colony stimulating factor 1 (macrophage)
CSPG4P2Y chondroitin sulfate proteoglycan 4 pseudogene 2, Y-linked
CXORF21 chromosome X open reading frame 21
CYP2B7P cytochrome P450, family 2, subfamily B, polypeptide 7, pseudogene
CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43
DCAF8L1 DDB1 and CUL4 associated factor 8-like 1
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)
DNTT DNA nucleotidylexotransferase
DST dystonin
EGR2 early growth response 2
EGR3 early growth response 3
ELMO2 engulfment and cell motility 2
EML5 echinoderm microtubule associated protein like 5
ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3
EYS eyes shut homolog (Drosophila)
FAM182A family with sequence similarity 182, member A
FAM21A family with sequence similarity 21, member A
FAM53C family with sequence similarity 53, member C
FFAR2 free fatty acid receptor 2
FFAR3 free fatty acid receptor 3
FGF12 fibroblast growth factor 12
FHDC1 FH2 domain containing 1
FIBIN fin bud initiation factor homolog (zebrafish)
FLG filaggrin
FRY furry homolog (Drosophila)
GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
GDF7 growth differentiation factor 7
GPX6 glutathione peroxidase 6
H3F3C H3 histone, family 3C
HELZ helicase with zinc finger
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HRNR hornerin
HTR1D 5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
IER3 immediate early response 3
IL1B interleukin 1, beta
IL9 interleukin 9
KANSL1L KAT8 regulatory NSL complex subunit 1-like
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3
KCTD15 potassium channel tetramerization domain containing 15
KIF1B kinesin family member 1B
KNOP1 lysine-rich nucleolar protein 1
LIMCH1 LIM and calponin homology domains 1
LINC00479 long intergenic non-protein coding RNA 479
LINC00593 long intergenic non-protein coding RNA 593
LOC100130987 uncharacterized LOC100130987
LOC283332 uncharacterized LOC283332
LOC613037 nuclear pore complex interacting protein pseudogene
LONRF3 LON peptidase N-terminal domain and ring finger 3
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
MAN1A2 mannosidase, alpha, class 1A, member 2
MAP3K14 mitogen-activated protein kinase kinase kinase 14
MAPT microtubule-associated protein tau
MDN1 MDN1, midasin homolog (yeast)
MIP major intrinsic protein of lens fiber
MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
NBPF10 neuroblastoma breakpoint family, member 10
NDST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NHSL2 NHS-like 2
NOTCH2 notch 2
NOTCH2NL notch 2 N-terminal like
NTN4 netrin 4
OPHN1 oligophrenin 1
OR11H6 olfactory receptor, family 11, subfamily H, member 6
OR52B4 olfactory receptor, family 52, subfamily B, member 4 (gene/pseudogene)
OR52W1 olfactory receptor, family 52, subfamily W, member 1
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OSM oncostatin M
OTUD1 OTU deubiquitinase 1
P2RY4 pyrimidinergic receptor P2Y, G-protein coupled, 4
PABPC1P2 poly(A) binding protein, cytoplasmic 1 pseudogene 2
PAGE2 P antigen family, member 2 (prostate associated)
PANK4 pantothenate kinase 4
PCDHB18P protocadherin beta 18 pseudogene
PCDHB7 protocadherin beta 7
PCDHGA5 protocadherin gamma subfamily A, 5
PCDHGA7 protocadherin gamma subfamily A, 7
PKDREJ polycystin (PKD) family receptor for egg jelly
PLXNB1 plexin B1
POMT2 protein-O-mannosyltransferase 2
POU3F4 POU class 3 homeobox 4
PRAMEF6 PRAME family member 6
PRRC2A proline-rich coiled-coil 2A
PRRX1 paired related homeobox 1
PRSS37 protease, serine, 37
PRSS42 protease, serine, 42
PSG3 pregnancy specific beta-1-glycoprotein 3
PYGO1 pygopus family PHD finger 1
RBL2 retinoblastoma-like 2
RC3H2 ring finger and CCCH-type domains 2
RNPC3 RNA-binding region (RNP1, RRM) containing 3
SACS sacsin molecular chaperone
SEC1P secretory blood group 1, pseudogene
SERINC5 serine incorporator 5
SFTPA2 surfactant protein A2
SHPRH SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase
SIX1 SIX homeobox 1
SLC35E2 solute carrier family 35, member E2
SMAD3 SMAD family member 3
SNORA66 small nucleolar RNA, H/ACA box 66
SNORD116-4 small nucleolar RNA, C/D box 116-4
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12)
SOGA1 suppressor of glucose, autophagy associated 1
SPEN spen family transcriptional repressor
SPRR4 small proline-rich protein 4
SRRM2 serine/arginine repetitive matrix 2
SYPL2 synaptophysin-like 2
SYTL4 synaptotagmin-like 4
TAAR5 trace amine associated receptor 5
TAAR8 trace amine associated receptor 8
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2
TAS2R38 taste receptor, type 2, member 38
TAS2R60 taste receptor, type 2, member 60
TCP10L t-complex 10-like
TNF tumor necrosis factor
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18
TOPAZ1 testis and ovary specific PAZ domain containing 1
UBA2 ubiquitin-like modifier activating enzyme 2
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UBR4 ubiquitin protein ligase E3 component n-recognin 4
VCAN versican
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
ZFC3H1 zinc finger, C3H1-type containing
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF275 zinc finger protein 275
ZNF318 zinc finger protein 318
ZNF592 zinc finger protein 592
ZNF77 zinc finger protein 77
ZNF774 zinc finger protein 774

low expression

Symbol Name
BTBD6 BTB (POZ) domain containing 6
IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
NDUFB4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa