Brain Lower Grade Glioma_LGG_TCGA-HT-A615-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

182 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-A615-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACTL7A actin-like 7A
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ARL5C ADP-ribosylation factor-like 5C
ASCL3 achaete-scute family bHLH transcription factor 3
ASCL4 achaete-scute family bHLH transcription factor 4
AURKAPS1 aurora kinase A pseudogene 1
BCCIP BRCA2 and CDKN1A interacting protein
BLZF1 basic leucine zipper nuclear factor 1
BOD1 biorientation of chromosomes in cell division 1
BRD8 bromodomain containing 8
BRMS1L breast cancer metastasis-suppressor 1-like
C10ORF53 chromosome 10 open reading frame 53
C1ORF27 chromosome 1 open reading frame 27
C21ORF62-AS1 C21orf62 antisense RNA 1
C2ORF47 chromosome 2 open reading frame 47
C3ORF17 chromosome 3 open reading frame 17
C3ORF38 chromosome 3 open reading frame 38
C5ORF15 chromosome 5 open reading frame 15
C5ORF24 chromosome 5 open reading frame 24
C5ORF56 chromosome 5 open reading frame 56
C9ORF153 chromosome 9 open reading frame 153
CAMLG calcium modulating ligand
CCDC47 coiled-coil domain containing 47
CCR8 chemokine (C-C motif) receptor 8
CCT4 chaperonin containing TCP1, subunit 4 (delta)
CD300LF CD300 molecule-like family member f
CD48 CD48 molecule
CD5L CD5 molecule-like
CDC23 cell division cycle 23
CDKN2AIP CDKN2A interacting protein
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CLEC4A C-type lectin domain family 4, member A
CLK4 CDC-like kinase 4
CNGA1 cyclic nucleotide gated channel alpha 1
CNOT6 CCR4-NOT transcription complex, subunit 6
CNOT8 CCR4-NOT transcription complex, subunit 8
COG6 component of oligomeric golgi complex 6
COX18 COX18 cytochrome c oxidase assembly factor
CSNK1A1 casein kinase 1, alpha 1
CYB5R4 cytochrome b5 reductase 4
DCTN4 dynactin 4 (p62)
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
DEFB126 defensin, beta 126
DHRS9 dehydrogenase/reductase (SDR family) member 9
DNASE2B deoxyribonuclease II beta
DTWD2 DTW domain containing 2
ECHDC1 ethylmalonyl-CoA decarboxylase 1
ERI2 ERI1 exoribonuclease family member 2
ETF1 eukaryotic translation termination factor 1
FAF2 Fas associated factor family member 2
FAM118A family with sequence similarity 118, member A
FAM218A family with sequence similarity 218, member A
FBXO3 F-box protein 3
FBXO38 F-box protein 38
FBXW11 F-box and WD repeat domain containing 11
FLJ41941 uncharacterized LOC100192420
FLJ45079 FLJ45079 protein
FNIP1 folliculin interacting protein 1
FOXP3 forkhead box P3
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GCSAM germinal center-associated, signaling and motility
GDF9 growth differentiation factor 9
GNPDA2 glucosamine-6-phosphate deaminase 2
GRPEL2 GrpE-like 2, mitochondrial (E. coli)
GSTM3 glutathione S-transferase mu 3 (brain)
H2BFWT H2B histone family, member W, testis-specific
HCG4 HLA complex group 4 (non-protein coding)
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HRH4 histamine receptor H4
HSPA9 heat shock 70kDa protein 9 (mortalin)
HTR3D 5-hydroxytryptamine (serotonin) receptor 3D, ionotropic
IRF8 interferon regulatory factor 8
JPX JPX transcript, XIST activator (non-protein coding)
KIAA0141 KIAA0141
KLF1 Kruppel-like factor 1 (erythroid)
KLRC1 killer cell lectin-like receptor subfamily C, member 1
LARS leucyl-tRNA synthetase
LIN28A lin-28 homolog A (C. elegans)
LINC00114 long intergenic non-protein coding RNA 114
LINC00472 long intergenic non-protein coding RNA 472
LINC01465 long intergenic non-protein coding RNA 1465
LIPA lipase A, lysosomal acid, cholesterol esterase
LOC728819
LOC730668 dynein heavy chain -like pseudogene
LRRIQ4 leucine-rich repeats and IQ motif containing 4
LYRM5 LYR motif containing 5
LYRM7 LYR motif containing 7
MED7 mediator complex subunit 7
MEP1A meprin A, alpha (PABA peptide hydrolase)
MICU2 mitochondrial calcium uptake 2
MIR17HG miR-17-92 cluster host gene
MORC1 MORC family CW-type zinc finger 1
MPEG1 macrophage expressed 1
MYO1A myosin IA
MYOD1 myogenic differentiation 1
NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2
NIN ninein (GSK3B interacting protein)
NMUR1 neuromedin U receptor 1
NOG noggin
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NUDCD2 NudC domain containing 2
OBP2A odorant binding protein 2A
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR2T12 olfactory receptor, family 2, subfamily T, member 12
OR51G1 olfactory receptor, family 51, subfamily G, member 1 (gene/pseudogene)
OR52K1 olfactory receptor, family 52, subfamily K, member 1
OR5K2 olfactory receptor, family 5, subfamily K, member 2
ORC3 origin recognition complex, subunit 3
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
PCDHB15 protocadherin beta 15
PCDHB17P protocadherin beta 17 pseudogene
PCDHB2 protocadherin beta 2
PCDHGB5 protocadherin gamma subfamily B, 5
PHOSPHO2 phosphatase, orphan 2
PIGW phosphatidylinositol glycan anchor biosynthesis, class W
PLA2G7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme
PRR34 proline rich 34
PRSS41 protease, serine, 41
PTCD3 pentatricopeptide repeat domain 3
PTGES3 prostaglandin E synthase 3 (cytosolic)
PWWP2A PWWP domain containing 2A
RAB14 RAB14, member RAS oncogene family
RAB33B RAB33B, member RAS oncogene family
RBM22 RNA binding motif protein 22
RGS21 regulator of G-protein signaling 21
RNF103 ring finger protein 103
RNF14 ring finger protein 14
SAP30L SAP30-like
SAR1B secretion associated, Ras related GTPase 1B
SFXN1 sideroflexin 1
SHCBP1L SHC SH2-domain binding protein 1-like
SKP1 S-phase kinase-associated protein 1
SLC35A5 solute carrier family 35, member A5
SLU7 SLU7 splicing factor homolog (S. cerevisiae)
SMIM15 small integral membrane protein 15
SNX14 sorting nexin 14
SOWAHD sosondowah ankyrin repeat domain family member D
SOX21 SRY (sex determining region Y)-box 21
SPDYC speedy/RINGO cell cycle regulator family member C
SPO11 SPO11 meiotic protein covalently bound to DSB
SRSF6 serine/arginine-rich splicing factor 6
STAG3L2 stromal antigen 3-like 2 (pseudogene)
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
TAS2R39 taste receptor, type 2, member 39
TBC1D23 TBC1 domain family, member 23
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)
TEDDM1 transmembrane epididymal protein 1
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
THAP5 THAP domain containing 5
THAP9 THAP domain containing 9
TIMM10B translocase of inner mitochondrial membrane 10 homolog B (yeast)
TMEM263 transmembrane protein 263
TMEM87A transmembrane protein 87A
TMPRSS13 transmembrane protease, serine 13
TMX2 thioredoxin-related transmembrane protein 2
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C
TREH trehalase (brush-border membrane glycoprotein)
TSIX TSIX transcript, XIST antisense RNA
TTC14 tetratricopeptide repeat domain 14
TXNDC15 thioredoxin domain containing 15
TXNDC9 thioredoxin domain containing 9
UBA5 ubiquitin-like modifier activating enzyme 5
UBE2B ubiquitin-conjugating enzyme E2B
UBE2D3 ubiquitin-conjugating enzyme E2D 3
UNC50 unc-50 homolog (C. elegans)
USPL1 ubiquitin specific peptidase like 1
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae)
WDR55 WD repeat domain 55
YIPF5 Yip1 domain family, member 5
YY2 YY2 transcription factor
ZC2HC1B zinc finger, C2HC-type containing 1B
ZCCHC10 zinc finger, CCHC domain containing 10
ZNF24 zinc finger protein 24
ZNF322P1 zinc finger protein 322 pseudogene 1
ZNF564 zinc finger protein 564

low expression

Symbol Name
ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
IFT172 intraflagellar transport 172
TTLL5 tubulin tyrosine ligase-like family member 5