Brain Lower Grade Glioma_LGG_TCGA-HT-A5RB-01A-11R-A28M-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

208 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-A5RB-01A-11R-A28M-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ANKRD13C ankyrin repeat domain 13C
ANKRD20A3 ankyrin repeat domain 20 family, member A3
ANKRD20A4 ankyrin repeat domain 20 family, member A4
ANKRD20A8P ankyrin repeat domain 20 family, member A8, pseudogene
ANKRD28 ankyrin repeat domain 28
ANKRD36B ankyrin repeat domain 36B
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2
AQP12A aquaporin 12A
ASTL astacin-like metallo-endopeptidase (M12 family)
ATP11AUN ATP11A upstream neighbor
BRMS1L breast cancer metastasis-suppressor 1-like
BRWD1 bromodomain and WD repeat domain containing 1
C15ORF62 chromosome 15 open reading frame 62
C17ORF104 chromosome 17 open reading frame 104
C1ORF100 chromosome 1 open reading frame 100
C22ORF42 chromosome 22 open reading frame 42
C2ORF57 chromosome 2 open reading frame 57
C4ORF29 chromosome 4 open reading frame 29
CACNG7 calcium channel, voltage-dependent, gamma subunit 7
CADM2 cell adhesion molecule 2
CASZ1 castor zinc finger 1
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC88A coiled-coil domain containing 88A
CCDC88C coiled-coil domain containing 88C
CCER1 coiled-coil glutamate-rich protein 1
CCT8L2 chaperonin containing TCP1, subunit 8 (theta)-like 2
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CLDN8 claudin 8
COL11A1 collagen, type XI, alpha 1
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa
CRIPAK cysteine-rich PAK1 inhibitor
CRISP3 cysteine-rich secretory protein 3
CROCCP3 ciliary rootlet coiled-coil, rootletin pseudogene 3
CRYBG3 beta-gamma crystallin domain containing 3
CRYGA crystallin, gamma A
CST9 cystatin 9 (testatin)
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1
DLEU2L deleted in lymphocytic leukemia 2-like
DMXL2 Dmx-like 2
DNAJC24 DnaJ (Hsp40) homolog, subfamily C, member 24
DNM3 dynamin 3
DOPEY1 dopey family member 1
EHMT1 euchromatic histone-lysine N-methyltransferase 1
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3
ERBB4 erb-b2 receptor tyrosine kinase 4
ERO1LB ERO1-like beta (S. cerevisiae)
EVX1 even-skipped homeobox 1
FAM106A family with sequence similarity 106, member A
FAM106CP family with sequence similarity 106, member C, pseudogene
FAM170A family with sequence similarity 170, member A
FAM217A family with sequence similarity 217, member A
FAM47A family with sequence similarity 47, member A
FAM95B1 family with sequence similarity 95, member B1
FGF17 fibroblast growth factor 17
FLJ41941 uncharacterized LOC100192420
FOXN3 forkhead box N3
GDF2 growth differentiation factor 2
GOLGA6D golgin A6 family, member D
GOLGA8A golgin A8 family, member A
GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
GPM6A glycoprotein M6A
GPR101 G protein-coupled receptor 101
GREB1 growth regulation by estrogen in breast cancer 1
GRIA2 glutamate receptor, ionotropic, AMPA 2
GRIA3 glutamate receptor, ionotropic, AMPA 3
GYPB glycophorin B (MNS blood group)
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
HIC2 hypermethylated in cancer 2
HIST1H2BA histone cluster 1, H2ba
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
JRKL JRK-like
KANSL1L KAT8 regulatory NSL complex subunit 1-like
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KLHL10 kelch-like family member 10
KLK15 kallikrein-related peptidase 15
KRT12 keratin 12, type I
LCNL1 lipocalin-like 1
LOC100134368 uncharacterized LOC100134368
LOC100190986 uncharacterized LOC100190986
LOC148696 uncharacterized LOC148696
LOC441666 zinc finger protein 91 pseudogene
LOC642852 uncharacterized LOC642852
LOC90834
LRP1B low density lipoprotein receptor-related protein 1B
LRRN4 leucine rich repeat neuronal 4
LSAMP limbic system-associated membrane protein
MAGEA8 melanoma antigen family A8
MARCH8 membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
MASP2 mannan-binding lectin serine peptidase 2
MBL2 mannose-binding lectin (protein C) 2, soluble
MEIOB meiosis specific with OB domains
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3
MICALL1 MICAL-like 1
MRGPRG-AS1 MRGPRG antisense RNA 1
MS4A3 membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
MTF2 metal response element binding transcription factor 2
MTMR1 myotubularin related protein 1
MTMR9LP myotubularin related protein 9-like, pseudogene
MTNR1A melatonin receptor 1A
MUCL1 mucin-like 1
MYSM1 Myb-like, SWIRM and MPN domains 1
NBPF15 neuroblastoma breakpoint family, member 15
NKTR natural killer cell triggering receptor
NPFFR1 neuropeptide FF receptor 1
NPPB natriuretic peptide B
OPHN1 oligophrenin 1
OR10Q1 olfactory receptor, family 10, subfamily Q, member 1
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1E2 olfactory receptor, family 1, subfamily E, member 2
OR2C1 olfactory receptor, family 2, subfamily C, member 1
OR2M3 olfactory receptor, family 2, subfamily M, member 3
OR2T33 olfactory receptor, family 2, subfamily T, member 33
OR4F21 olfactory receptor, family 4, subfamily F, member 21
OXCT2 3-oxoacid CoA transferase 2
PABPC1P2 poly(A) binding protein, cytoplasmic 1 pseudogene 2
PAGE1 P antigen family, member 1 (prostate associated)
PCDH15 protocadherin-related 15
PCDHB19P protocadherin beta 19 pseudogene
PCDHB5 protocadherin beta 5
PCDHGA2 protocadherin gamma subfamily A, 2
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PDGFC platelet derived growth factor C
PDZK1P1 PDZ domain containing 1 pseudogene 1
PER3 period circadian clock 3
PER4 period circadian clock 3 pseudogene
PFN3 profilin 3
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PI4KAP2 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 2
PLET1 placenta expressed transcript 1
PLGLB2 plasminogen-like B2
PODN podocan
PRAMEF11 PRAME family member 11
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit
PRPF39 pre-mRNA processing factor 39
PRTG protogenin
RAB19 RAB19, member RAS oncogene family
RBMXL3 RNA binding motif protein, X-linked-like 3
RICTOR RPTOR independent companion of MTOR, complex 2
RNPC3 RNA-binding region (RNP1, RRM) containing 3
RPL13AP17 ribosomal protein L13a pseudogene 17
SCN1A sodium channel, voltage gated, type I alpha subunit
SENP7 SUMO1/sentrin specific peptidase 7
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
SGCZ sarcoglycan, zeta
SH3RF3 SH3 domain containing ring finger 3
SIX4 SIX homeobox 4
SLC16A14 solute carrier family 16, member 14
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36
SLC35E2 solute carrier family 35, member E2
SLC5A10 solute carrier family 5 (sodium/sugar cotransporter), member 10
SNORD116-28 small nucleolar RNA, C/D box 116-28
SNX14 sorting nexin 14
SNX29P2 sorting nexin 29 pseudogene 2
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
TAS2R42 taste receptor, type 2, member 42
TAS2R43 taste receptor, type 2, member 43
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1
TCERG1 transcription elongation regulator 1
TDRP testis development related protein
TKTL2 transketolase-like 2
TPP2 tripeptidyl peptidase II
TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1
TRERF1 transcriptional regulating factor 1
TTTY15 testis-specific transcript, Y-linked 15 (non-protein coding)
TXLNGY taxilin gamma pseudogene, Y-linked
U2SURP U2 snRNP-associated SURP domain containing
UBQLN3 ubiquilin 3
UGT2B10 UDP glucuronosyltransferase 2 family, polypeptide B10
USP43 ubiquitin specific peptidase 43
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae)
WDR17 WD repeat domain 17
WNT5A wingless-type MMTV integration site family, member 5A
XRN1 5'-3' exoribonuclease 1
ZFP14 ZFP14 zinc finger protein
ZFYVE16 zinc finger, FYVE domain containing 16
ZNF112 zinc finger protein 112
ZNF132 zinc finger protein 132
ZNF154 zinc finger protein 154
ZNF224 zinc finger protein 224
ZNF280D zinc finger protein 280D
ZNF320 zinc finger protein 320
ZNF334 zinc finger protein 334
ZNF382 zinc finger protein 382
ZNF418 zinc finger protein 418
ZNF441 zinc finger protein 441
ZNF471 zinc finger protein 471
ZNF514 zinc finger protein 514
ZNF518A zinc finger protein 518A
ZNF549 zinc finger protein 549
ZNF551 zinc finger protein 551
ZNF714 zinc finger protein 714
ZNF770 zinc finger protein 770
ZNF780B zinc finger protein 780B
ZNF793 zinc finger protein 793
ZNF804A zinc finger protein 804A
ZNF827 zinc finger protein 827

low expression

Symbol Name
ATG5 autophagy related 5
FBXO22-AS1 FBXO22 antisense RNA 1
KATNA1 katanin p60 (ATPase containing) subunit A 1
MRPL18 mitochondrial ribosomal protein L18
SFT2D1 SFT2 domain containing 1
TFB1M transcription factor B1, mitochondrial
WDR53 WD repeat domain 53