Brain Lower Grade Glioma_LGG_TCGA-HT-8111-01A-11R-2404-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

250 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-8111-01A-11R-2404-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL2 arylacetamide deacetylase-like 2
ACY3 aminoacylase 3
ADIPOR2 adiponectin receptor 2
ADRA2B adrenoceptor alpha 2B
ALAD aminolevulinate dehydratase
AMER2 APC membrane recruitment protein 2
AMPD3 adenosine monophosphate deaminase 3
ANLN anillin, actin binding protein
ANO7 anoctamin 7
ANTXRL anthrax toxin receptor-like
ARHGAP21 Rho GTPase activating protein 21
ARHGAP6 Rho GTPase activating protein 6
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16
ARHGEF37 Rho guanine nucleotide exchange factor (GEF) 37
ARRDC2 arrestin domain containing 2
ARRDC4 arrestin domain containing 4
BAAT bile acid CoA:amino acid N-acyltransferase
BAG3 BCL2-associated athanogene 3
BSPH1 binder of sperm protein homolog 1
BSPRY B-box and SPRY domain containing
C10ORF107 chromosome 10 open reading frame 107
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
C1ORF210 chromosome 1 open reading frame 210
C1QTNF9B-AS1 C1QTNF9B antisense RNA 1
C20ORF197 chromosome 20 open reading frame 197
C22ORF34 chromosome 22 open reading frame 34
C22ORF46 chromosome 22 open reading frame 46
C9ORF139 chromosome 9 open reading frame 139
CCDC79 coiled-coil domain containing 79
CD38 CD38 molecule
CDRT15 CMT1A duplicated region transcript 15
CEACAM18 carcinoembryonic antigen-related cell adhesion molecule 18
CLCA4 chloride channel accessory 4
CLDN11 claudin 11
CLDND1 claudin domain containing 1
CLEC4C C-type lectin domain family 4, member C
CLMN calmin (calponin-like, transmembrane)
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
CPOX coproporphyrinogen oxidase
CPS1 carbamoyl-phosphate synthase 1, mitochondrial
CRYGC crystallin, gamma C
CXADRP3 coxsackie virus and adenovirus receptor pseudogene 3
DEFB125 defensin, beta 125
DHFRL1 dihydrofolate reductase-like 1
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DKFZP434K028 uncharacterized LOC26070
DLG1 discs, large homolog 1 (Drosophila)
DOCK10 dedicator of cytokinesis 10
DTNA dystrobrevin, alpha
DTX4 deltex 4, E3 ubiquitin ligase
DUSP10 dual specificity phosphatase 10
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2
EDARADD EDAR-associated death domain
ELOVL1 ELOVL fatty acid elongase 1
EMC2 ER membrane protein complex subunit 2
EPB41L2 erythrocyte membrane protein band 4.1-like 2
FAM107B family with sequence similarity 107, member B
FAM129B family with sequence similarity 129, member B
FAM134B family with sequence similarity 134, member B
FAM188A family with sequence similarity 188, member A
FAM198B family with sequence similarity 198, member B
FAM227B family with sequence similarity 227, member B
FAM53B family with sequence similarity 53, member B
FAM58A family with sequence similarity 58, member A
FAM58BP cyclin-related protein FAM58B
FAM92A1P2 family with sequence similarity 92, member A3
FBXO25 F-box protein 25
FDFT1 farnesyl-diphosphate farnesyltransferase 1
FECH ferrochelatase
FGF1 fibroblast growth factor 1 (acidic)
FNBP1 formin binding protein 1
FNIP2 folliculin interacting protein 2
FNTB farnesyltransferase, CAAX box, beta
FRYL FRY-like
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
GAB2 GRB2-associated binding protein 2
GAREM GRB2 associated, regulator of MAPK1
GFAP glial fibrillary acidic protein
GJA3 gap junction protein, alpha 3, 46kDa
GOLGA7 golgin A7
GPRC5B G protein-coupled receptor, class C, group 5, member B
GRXCR1 glutaredoxin, cysteine rich 1
GSDMC gasdermin C
GSN gelsolin
GUSBP3 glucuronidase, beta pseudogene 3
HACD1 3-hydroxyacyl-CoA dehydratase 1
HARBI1 harbinger transposase derived 1
HEATR9 HEAT repeat containing 9
HHIP hedgehog interacting protein
HMHB1 histocompatibility (minor) HB-1
HSP90B3P heat shock protein 90kDa beta (Grp94), member 3, pseudogene
IKZF2 IKAROS family zinc finger 2 (Helios)
IP6K3 inositol hexakisphosphate kinase 3
IQCF5 IQ motif containing F5
KCNK6 potassium channel, two pore domain subfamily K, member 6
KCNU1 potassium channel, subfamily U, member 1
KCTD21 potassium channel tetramerization domain containing 21
KCTD4 potassium channel tetramerization domain containing 4
KIAA0930 KIAA0930
KIAA1161 KIAA1161
KIAA1598
KIAA2013 KIAA2013
KLKP1 kallikrein pseudogene 1
LAMP2 lysosomal-associated membrane protein 2
LHB luteinizing hormone beta polypeptide
LINC01600 long intergenic non-protein coding RNA 1600
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LOC643486
LOC728613 programmed cell death 6 pseudogene
LPAR1 lysophosphatidic acid receptor 1
MAGEA5 melanoma antigen family A5
MAN2A1 mannosidase, alpha, class 2A, member 1
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4
MAPRE2 microtubule-associated protein, RP/EB family, member 2
MGC16025 uncharacterized LOC85009
MGC16275 uncharacterized protein MGC16275
MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
MOG myelin oligodendrocyte glycoprotein
MROH9 maestro heat-like repeat family member 9
MTERF1 mitochondrial transcription termination factor 1
MTUS1 microtubule associated tumor suppressor 1
MVB12B multivesicular body subunit 12B
NARS asparaginyl-tRNA synthetase
NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
NEK7 NIMA-related kinase 7
NINJ1 ninjurin 1
NINJ2 ninjurin 2
NIPSNAP3A nipsnap homolog 3A (C. elegans)
NPC1 Niemann-Pick disease, type C1
NXPE3 neurexophilin and PC-esterase domain family, member 3
OPTN optineurin
OR10H5 olfactory receptor, family 10, subfamily H, member 5
OR1I1 olfactory receptor, family 1, subfamily I, member 1
OR1L4 olfactory receptor, family 1, subfamily L, member 4
OR2B11 olfactory receptor, family 2, subfamily B, member 11
OR2C1 olfactory receptor, family 2, subfamily C, member 1
OR4N5 olfactory receptor, family 4, subfamily N, member 5
OR51B2 olfactory receptor, family 51, subfamily B, member 2 (gene/pseudogene)
OR51B4 olfactory receptor, family 51, subfamily B, member 4
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR52N5 olfactory receptor, family 52, subfamily N, member 5
OR5AU1 olfactory receptor, family 5, subfamily AU, member 1
OR5K2 olfactory receptor, family 5, subfamily K, member 2
OR6V1 olfactory receptor, family 6, subfamily V, member 1
OR8U1 olfactory receptor, family 8, subfamily U, member 1
PCDHA9 protocadherin alpha 9
PCDHGB4 protocadherin gamma subfamily B, 4
PGAP3 post-GPI attachment to proteins 3
PGLYRP2 peptidoglycan recognition protein 2
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1
PIGN phosphatidylinositol glycan anchor biosynthesis, class N
PIGP phosphatidylinositol glycan anchor biosynthesis, class P
PIK3IP1 phosphoinositide-3-kinase interacting protein 1
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PKDREJ polycystin (PKD) family receptor for egg jelly
PLP1 proteolipid protein 1
POTEE POTE ankyrin domain family, member E
POTEM POTE ankyrin domain family, member M
PPM1H protein phosphatase, Mg2+/Mn2+ dependent, 1H
PPP1R2P1 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 1
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
PRM2 protamine 2
PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1
PRR34 proline rich 34
PRTFDC1 phosphoribosyl transferase domain containing 1
PTGER3 prostaglandin E receptor 3 (subtype EP3)
PTK2 protein tyrosine kinase 2
PTP4A2 protein tyrosine phosphatase type IVA, member 2
PTPN11 protein tyrosine phosphatase, non-receptor type 11
PXT1 peroxisomal, testis specific 1
RAB29 RAB29, member RAS oncogene family
RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1
RBM17 RNA binding motif protein 17
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
RPS4Y2 ribosomal protein S4, Y-linked 2
SAMD4A sterile alpha motif domain containing 4A
SBF1P1 SET binding factor 1 pseudogene 1
SCGB2B2 secretoglobin, family 2B, member 2
SEC11C SEC11 homolog C (S. cerevisiae)
SH3TC1 SH3 domain and tetratricopeptide repeats 1
SH3TC2 SH3 domain and tetratricopeptide repeats 2
SHROOM4 shroom family member 4
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC22A23 solute carrier family 22, member 23
SLC31A2 solute carrier family 31 (copper transporter), member 2
SLC45A3 solute carrier family 45, member 3
SLC9A9 solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9
SLC9C1 solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1
SLITRK6 SLIT and NTRK-like family, member 6
SNAI3 snail family zinc finger 3
SNORA2B small nucleolar RNA, H/ACA box 2B
SNORA4 small nucleolar RNA, H/ACA box 4
SNX30 sorting nexin family member 30
SORBS1 sorbin and SH3 domain containing 1
SORT1 sortilin 1
SPANXN3 SPANX family, member N3
SPATA45 spermatogenesis associated 45
SSH2 slingshot protein phosphatase 2
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
SUSD6 sushi domain containing 6
TBATA thymus, brain and testes associated
TCP10L2 t-complex 10-like 2
TEX33 testis expressed 33
THEMIS2 thymocyte selection associated family member 2
TJP2 tight junction protein 2
TMC7 transmembrane channel-like 7
TMEM174 transmembrane protein 174
TMEM211 transmembrane protein 211
TMEM53 transmembrane protein 53
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TP53INP1 tumor protein p53 inducible nuclear protein 1
TPRN taperin
TRAK2 trafficking protein, kinesin binding 2
TRIM16 tripartite motif containing 16
TRIM16L tripartite motif containing 16-like
TSPO2 translocator protein 2
TTLL7 tubulin tyrosine ligase-like family member 7
TTTY23 testis-specific transcript, Y-linked 23 (non-protein coding)
TTYH2 tweety family member 2
UBQLN3 ubiquilin 3
ULK4P2 ULK4 pseudogene 2
ULK4P3 ULK4 pseudogene 3
USP6NL USP6 N-terminal like
UTRN utrophin
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VENTXP1 VENT homeobox pseudogene 1
VN1R10P vomeronasal 1 receptor 10 pseudogene
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae)
VSX2 visual system homeobox 2
WDFY2 WD repeat and FYVE domain containing 2
WDR31 WD repeat domain 31
WDR49 WD repeat domain 49
WWC1 WW and C2 domain containing 1
WWTR1 WW domain containing transcription regulator 1
ZDHHC9 zinc finger, DHHC-type containing 9
ZFAND5 zinc finger, AN1-type domain 5
ZFAT-AS1 ZFAT antisense RNA 1
ZFP57 ZFP57 zinc finger protein
ZNF189 zinc finger protein 189
ZNF271P zinc finger protein 271, pseudogene
ZNF415 zinc finger protein 415
ZNF652 zinc finger protein 652
ZNF846 zinc finger protein 846
ZNF880 zinc finger protein 880

low expression

Symbol Name
CSRP2BP CSRP2 binding protein
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
USP19 ubiquitin specific peptidase 19