Brain Lower Grade Glioma_LGG_TCGA-HT-7875-01A-11R-2403-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

303 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-7875-01A-11R-2403-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ABCC6P2 ATP-binding cassette, sub-family C, member 6 pseudogene 2
ABHD4 abhydrolase domain containing 4
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ACACA acetyl-CoA carboxylase alpha
ACOT2 acyl-CoA thioesterase 2
ACOXL acyl-CoA oxidase-like
ACTRT1 actin-related protein T1
ADGRA3 adhesion G protein-coupled receptor A3
ADGRB3 adhesion G protein-coupled receptor B3
ADGRD1 adhesion G protein-coupled receptor D1
ADGRV1 adhesion G protein-coupled receptor V1
ADRA1A adrenoceptor alpha 1A
AFAP1L2 actin filament associated protein 1-like 2
AHSG alpha-2-HS-glycoprotein
ALDH1L2 aldehyde dehydrogenase 1 family, member L2
ALMS1P Alstrom syndrome 1 pseudogene
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1
ANKFY1 ankyrin repeat and FYVE domain containing 1
ANKRD31 ankyrin repeat domain 31
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
ANO2 anoctamin 2, calcium activated chloride channel
APC adenomatous polyposis coli
ARHGAP36 Rho GTPase activating protein 36
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26
ARL13A ADP-ribosylation factor-like 13A
ARPIN actin-related protein 2/3 complex inhibitor
ASB15 ankyrin repeat and SOCS box containing 15
ASCL4 achaete-scute family bHLH transcription factor 4
ASIC5 acid sensing (proton gated) ion channel family member 5
BIRC6 baculoviral IAP repeat containing 6
BLID BH3-like motif containing, cell death inducer
BLM Bloom syndrome, RecQ helicase-like
BSPRY B-box and SPRY domain containing
C14ORF105 chromosome 14 open reading frame 105
C14ORF132 chromosome 14 open reading frame 132
C15ORF39 chromosome 15 open reading frame 39
C17ORF100 chromosome 17 open reading frame 100
C2ORF72 chromosome 2 open reading frame 72
C5ORF38 chromosome 5 open reading frame 38
C9ORF129 chromosome 9 open reading frame 129
CALN1 calneuron 1
CBS cystathionine-beta-synthase
CCDC141 coiled-coil domain containing 141
CCDC171 coiled-coil domain containing 171
CCDC178 coiled-coil domain containing 178
CD38 CD38 molecule
CDC14B cell division cycle 14B
CDC14C cell division cycle 14C
CDH10 cadherin 10, type 2 (T2-cadherin)
CECR2 cat eye syndrome chromosome region, candidate 2
CEP350 centrosomal protein 350kDa
CEP68 centrosomal protein 68kDa
CERKL ceramide kinase-like
CFAP74 cilia and flagella associated protein 74
CHDH choline dehydrogenase
CNBD2 cyclic nucleotide binding domain containing 2
COL22A1 collagen, type XXII, alpha 1
CPNE5 copine V
CRLF2 cytokine receptor-like factor 2
CRYAA crystallin, alpha A
CSMD1 CUB and Sushi multiple domains 1
CST5 cystatin D
CX3CL1 chemokine (C-X3-C motif) ligand 1
CYP11B2 cytochrome P450, family 11, subfamily B, polypeptide 2
DAB2IP DAB2 interacting protein
DCC DCC netrin 1 receptor
DEFB125 defensin, beta 125
DENND4C DENN/MADD domain containing 4C
DISC1 disrupted in schizophrenia 1
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DOCK1 dedicator of cytokinesis 1
DOK5 docking protein 5
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
EP400 E1A binding protein p400
ESX1 ESX homeobox 1
EXPH5 exophilin 5
FAM106CP family with sequence similarity 106, member C, pseudogene
FAM168A family with sequence similarity 168, member A
FAM21A family with sequence similarity 21, member A
FAM221B family with sequence similarity 221, member B
FAM46D family with sequence similarity 46, member D
FAM65C family with sequence similarity 65, member C
FAM66C family with sequence similarity 66, member C
FAT3 FAT atypical cadherin 3
FGFBP3 fibroblast growth factor binding protein 3
FHDC1 FH2 domain containing 1
FLVCR2 feline leukemia virus subgroup C cellular receptor family, member 2
FMO2 flavin containing monooxygenase 2 (non-functional)
FMO6P flavin containing monooxygenase 6 pseudogene
FRMPD2 FERM and PDZ domain containing 2
G6PC glucose-6-phosphatase, catalytic subunit
GAB4 GRB2-associated binding protein family, member 4
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1
GAN gigaxonin
GDF9 growth differentiation factor 9
GLTPD2 glycolipid transfer protein domain containing 2
GPR161 G protein-coupled receptor 161
GPR27 G protein-coupled receptor 27
GPR75 G protein-coupled receptor 75
GPRC5B G protein-coupled receptor, class C, group 5, member B
GPRIN3 GPRIN family member 3
GREB1 growth regulation by estrogen in breast cancer 1
GRID1 glutamate receptor, ionotropic, delta 1
GRID2 glutamate receptor, ionotropic, delta 2
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
GSTM1 glutathione S-transferase mu 1
GSTM3 glutathione S-transferase mu 3 (brain)
GUCY2F guanylate cyclase 2F, retinal
HCG4B HLA complex group 4B (non-protein coding)
HDAC4 histone deacetylase 4
HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2
HKDC1 hexokinase domain containing 1
HMBOX1 homeobox containing 1
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HSF2BP heat shock transcription factor 2 binding protein
HSFX2 heat shock transcription factor family, X linked 2
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
IFNA6 interferon, alpha 6
IGLL1 immunoglobulin lambda-like polypeptide 1
IL33 interleukin 33
INPP1 inositol polyphosphate-1-phosphatase
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa
IQCA1 IQ motif containing with AAA domain 1
KCNG4 potassium channel, voltage gated modifier subfamily G, member 4
KCTD21 potassium channel tetramerization domain containing 21
KIAA1143 KIAA1143
KIAA1147 KIAA1147
KLHL25 kelch-like family member 25
KMT2A lysine (K)-specific methyltransferase 2A
KNOP1 lysine-rich nucleolar protein 1
LAMA1 laminin, alpha 1
LDOC1L leucine zipper, down-regulated in cancer 1-like
LHFPL1 lipoma HMGIC fusion partner-like 1
LHX3 LIM homeobox 3
LINC00167 long intergenic non-protein coding RNA 167
LINC00235 long intergenic non-protein coding RNA 235
LINC00319 long intergenic non-protein coding RNA 319
LINC00472 long intergenic non-protein coding RNA 472
LINC00574 long intergenic non-protein coding RNA 574
LINC01550 long intergenic non-protein coding RNA 1550
LOC100128164 four and a half LIM domains 1 pseudogene
LOC100268168 uncharacterized LOC100268168
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene
LOC441204 uncharacterized LOC441204
LOC652276 potassium channel tetramerization domain containing 5 pseudogene
LOC728819
LOR loricrin
LPCAT1 lysophosphatidylcholine acyltransferase 1
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
LRP1B low density lipoprotein receptor-related protein 1B
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene
LRRC37B leucine rich repeat containing 37B
MAGEB4 melanoma antigen family B4
MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1
MARC1 mitochondrial amidoxime reducing component 1
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
MCM3AP-AS1 MCM3AP antisense RNA 1
MCMDC2 minichromosome maintenance domain containing 2
MFGE8 milk fat globule-EGF factor 8 protein
MGAT4C MGAT4 family, member C
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
MMD2 monocyte to macrophage differentiation-associated 2
MPDZ multiple PDZ domain protein
MSX2P1 msh homeobox 2 pseudogene 1
MYO10 myosin X
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NAV1 neuron navigator 1
NHSL1 NHS-like 1
NKAIN3 Na+/K+ transporting ATPase interacting 3
NKAPP1 NFKB activating protein pseudogene 1
NKX1-2 NK1 homeobox 2
NLRP14 NLR family, pyrin domain containing 14
NPAS3 neuronal PAS domain protein 3
NR3C2 nuclear receptor subfamily 3, group C, member 2
NRDE2 NRDE-2, necessary for RNA interference, domain containing
NT5C1A 5'-nucleotidase, cytosolic IA
NTN3 netrin 3
NXT2 nuclear transport factor 2-like export factor 2
ODF4 outer dense fiber of sperm tails 4
OR1F1 olfactory receptor, family 1, subfamily F, member 1
OR1F2P olfactory receptor, family 1, subfamily F, member 2, pseudogene
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR2C1 olfactory receptor, family 2, subfamily C, member 1
OR2M3 olfactory receptor, family 2, subfamily M, member 3
OR52B4 olfactory receptor, family 52, subfamily B, member 4 (gene/pseudogene)
OR5B12 olfactory receptor, family 5, subfamily B, member 12
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
OTC ornithine carbamoyltransferase
P2RY4 pyrimidinergic receptor P2Y, G-protein coupled, 4
PACRGL PARK2 co-regulated-like
PARD3B par-3 family cell polarity regulator beta
PARP8 poly (ADP-ribose) polymerase family, member 8
PCDH10 protocadherin 10
PCDHA13 protocadherin alpha 13
PCDHA9 protocadherin alpha 9
PCDHB4 protocadherin beta 4
PCDHGA10 protocadherin gamma subfamily A, 10
PCDHGB6 protocadherin gamma subfamily B, 6
PCSK9 proprotein convertase subtilisin/kexin type 9
PCYT1B phosphate cytidylyltransferase 1, choline, beta
PDE3A phosphodiesterase 3A, cGMP-inhibited
PDPR pyruvate dehydrogenase phosphatase regulatory subunit
PDZD8 PDZ domain containing 8
PFN3 profilin 3
PGPEP1L pyroglutamyl-peptidase I-like
PON1 paraoxonase 1
PON3 paraoxonase 3
POTEH POTE ankyrin domain family, member H
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP3R2 protein phosphatase 3, regulatory subunit B, beta
PRSS30P protease, serine, 30, pseudogene
PSMB11 proteasome (prosome, macropain) subunit, beta type, 11
PTGR2 prostaglandin reductase 2
PTPRD protein tyrosine phosphatase, receptor type, D
PTPRT protein tyrosine phosphatase, receptor type, T
RBBP6 retinoblastoma binding protein 6
RBSN rabenosyn, RAB effector
RNASE7 ribonuclease, RNase A family, 7
RNASE8 ribonuclease, RNase A family, 8
SAMD5 sterile alpha motif domain containing 5
SASH1 SAM and SH3 domain containing 1
SCARNA9 small Cajal body-specific RNA 9
SCN9A sodium channel, voltage gated, type IX alpha subunit
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
SETBP1 SET binding protein 1
SHISA6 shisa family member 6
SIRPB1 signal-regulatory protein beta 1
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC23A2 solute carrier family 23 (ascorbic acid transporter), member 2
SLC38A1 solute carrier family 38, member 1
SLC5A12 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18
SLITRK2 SLIT and NTRK-like family, member 2
SLITRK3 SLIT and NTRK-like family, member 3
SMAD9 SMAD family member 9
SNCAIP synuclein, alpha interacting protein
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5)
SNX33 sorting nexin 33
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPDYE4 speedy/RINGO cell cycle regulator family member E4
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SRL sarcalumenin
SSTR2 somatostatin receptor 2
ST6GAL2 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
SULF2 sulfatase 2
SYCE1 synaptonemal complex central element protein 1
SYT14 synaptotagmin XIV
SYT16 synaptotagmin XVI
TAAR2 trace amine associated receptor 2
TADA2A transcriptional adaptor 2A
TAS2R43 taste receptor, type 2, member 43
THSD4 thrombospondin, type I, domain containing 4
TIAM1 T-cell lymphoma invasion and metastasis 1
TIGIT T cell immunoreceptor with Ig and ITIM domains
TJP1 tight junction protein 1
TMEM185A transmembrane protein 185A
TMIGD1 transmembrane and immunoglobulin domain containing 1
TNN tenascin N
TRAF3 TNF receptor-associated factor 3
TRIM40 tripartite motif containing 40
TRIM66 tripartite motif containing 66
TSPY1 testis specific protein, Y-linked 1
TSPY26P testis specific protein, Y-linked 26, pseudogene
TTLL8 tubulin tyrosine ligase-like family member 8
TTN titin
TTPA tocopherol (alpha) transfer protein
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
TUG1 taurine up-regulated 1 (non-protein coding)
ULK4P3 ULK4 pseudogene 3
VEPH1 ventricular zone expressed PH domain-containing 1
WDFY3 WD repeat and FYVE domain containing 3
WDFY3-AS2 WDFY3 antisense RNA 2
WDR31 WD repeat domain 31
WWP2 WW domain containing E3 ubiquitin protein ligase 2
XKR3 XK, Kell blood group complex subunit-related family, member 3
ZBTB20 zinc finger and BTB domain containing 20
ZBTB32 zinc finger and BTB domain containing 32
ZBTB37 zinc finger and BTB domain containing 37
ZC2HC1B zinc finger, C2HC-type containing 1B
ZNF236 zinc finger protein 236
ZNF407 zinc finger protein 407
ZNF441 zinc finger protein 441
ZNF705A zinc finger protein 705A
ZNF727 zinc finger protein 727
ZNF77 zinc finger protein 77
ZNF774 zinc finger protein 774
ZNF826P zinc finger protein 826, pseudogene
ZNF843 zinc finger protein 843
ZPBP zona pellucida binding protein
ZSCAN10 zinc finger and SCAN domain containing 10
ZSWIM2 zinc finger, SWIM-type containing 2

low expression

Symbol Name
GPN3 GPN-loop GTPase 3
OAZ2 ornithine decarboxylase antizyme 2
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome)
ZFAND1 zinc finger, AN1-type domain 1