Brain Lower Grade Glioma_LGG_TCGA-HT-7858-01A-11R-2403-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

213 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-7858-01A-11R-2403-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6
ACP5 acid phosphatase 5, tartrate resistant
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
AICDA activation-induced cytidine deaminase
ANKRD36 ankyrin repeat domain 36
ANP32A-IT1 ANP32A intronic transcript 1
AQP10 aquaporin 10
ARCN1 archain 1
ARMCX3 armadillo repeat containing, X-linked 3
ASNS asparagine synthetase (glutamine-hydrolyzing)
ATP6V0D2 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
BICD2 bicaudal D homolog 2 (Drosophila)
BRCC3 BRCA1/BRCA2-containing complex, subunit 3
C10ORF113 chromosome 10 open reading frame 113
C1ORF127 chromosome 1 open reading frame 127
C3P1 complement component 3 precursor pseudogene
C7ORF34 chromosome 7 open reading frame 34
CAPZA3 capping protein (actin filament) muscle Z-line, alpha 3
CARS cysteinyl-tRNA synthetase
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC155 coiled-coil domain containing 155
CCL3 chemokine (C-C motif) ligand 3
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCL3L3 chemokine (C-C motif) ligand 3-like 3
CCL4 chemokine (C-C motif) ligand 4
CCL4L2 chemokine (C-C motif) ligand 4-like 2
CD300LF CD300 molecule-like family member f
CD48 CD48 molecule
CLTCL1 clathrin, heavy chain-like 1
CMC4 C-x(9)-C motif containing 4
CNBD1 cyclic nucleotide binding domain containing 1
CSTA cystatin A (stefin A)
CXORF65 chromosome X open reading frame 65
CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
DIO1 deiodinase, iodothyronine, type I
DKC1 dyskeratosis congenita 1, dyskerin
DNAJC5B DnaJ (Hsp40) homolog, subfamily C, member 5 beta
DNASE2B deoxyribonuclease II beta
DOCK10 dedicator of cytokinesis 10
DPRXP4 divergent-paired related homeobox pseudogene 4
DPYSL5 dihydropyrimidinase-like 5
DUSP21 dual specificity phosphatase 21
EGR1 early growth response 1
EGR2 early growth response 2
EPGN epithelial mitogen
EPRS glutamyl-prolyl-tRNA synthetase
EQTN equatorin, sperm acrosome associated
ERVFRD-1 endogenous retrovirus group FRD, member 1
FAM106A family with sequence similarity 106, member A
FAR1 fatty acyl CoA reductase 1
FAT1 FAT atypical cadherin 1
FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32)
FCGR2C Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)
FLJ34503 uncharacterized FLJ34503
FLJ42627 uncharacterized LOC645644
FOXE1 forkhead box E1
FRG2 FSHD region gene 2
FRK fyn-related Src family tyrosine kinase
FRYL FRY-like
FUNDC2 FUN14 domain containing 2
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
GALNT7 polypeptide N-acetylgalactosaminyltransferase 7
GALNT9 polypeptide N-acetylgalactosaminyltransferase 9
GDI1 GDP dissociation inhibitor 1
GFRAL GDNF family receptor alpha like
GK2 glycerol kinase 2
GOLGA6A golgin A6 family, member A
GPNMB glycoprotein (transmembrane) nmb
GPR32 G protein-coupled receptor 32
GPR88 G protein-coupled receptor 88
GPRC5D G protein-coupled receptor, class C, group 5, member D
GSTM2 glutathione S-transferase mu 2 (muscle)
GSTM3 glutathione S-transferase mu 3 (brain)
GUSBP2 glucuronidase, beta pseudogene 2
HAL histidine ammonia-lyase
HEMGN hemogen
HSPA1A heat shock 70kDa protein 1A
HSPA1B heat shock 70kDa protein 1B
HTRA4 HtrA serine peptidase 4
IGSF6 immunoglobulin superfamily, member 6
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL18RAP interleukin 18 receptor accessory protein
IL1R2 interleukin 1 receptor, type II
ILDR1 immunoglobulin-like domain containing receptor 1
IRAK1 interleukin-1 receptor-associated kinase 1
ITGAD integrin, alpha D
KCNK16 potassium channel, two pore domain subfamily K, member 16
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KLHL13 kelch-like family member 13
KLRF1 killer cell lectin-like receptor subfamily F, member 1
KPNB1 karyopherin (importin) beta 1
KRTAP4-8 keratin associated protein 4-8
KRTAP9-9 keratin associated protein 9-9
LDHAL6B lactate dehydrogenase A-like 6B
LILRB5 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5
LINC00051 long intergenic non-protein coding RNA 51
LINC00323 long intergenic non-protein coding RNA 323
LINC01599 long intergenic non-protein coding RNA 1599
LIPA lipase A, lysosomal acid, cholesterol esterase
LOC100133050 glucuronidase, beta pseudogene
LOC283922 pyruvate dehydrogenase phosphatase regulatory subunit pseudogene
LOC441454 prothymosin, alpha pseudogene
LOC650293 seven transmembrane helix receptor
LOC728323 uncharacterized LOC728323
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene
LY9 lymphocyte antigen 9
MECP2 methyl CpG binding protein 2
MITF microphthalmia-associated transcription factor
MMP20 matrix metallopeptidase 20
MOB3B MOB kinase activator 3B
MTCP1 mature T-cell proliferation 1
MYO1A myosin IA
NBEAP1 neurobeachin pseudogene 1
NBPF15 neuroblastoma breakpoint family, member 15
NCOR1P1 nuclear receptor corepressor 1 pseudogene 1
NCR3 natural cytotoxicity triggering receptor 3
NFRKB nuclear factor related to kappaB binding protein
NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1
NHSL2 NHS-like 2
NLRP12 NLR family, pyrin domain containing 12
NLRP13 NLR family, pyrin domain containing 13
NOL6 nucleolar protein 6 (RNA-associated)
OR10G3 olfactory receptor, family 10, subfamily G, member 3
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1L8 olfactory receptor, family 1, subfamily L, member 8
OR2A2 olfactory receptor, family 2, subfamily A, member 2
OR2AE1 olfactory receptor, family 2, subfamily AE, member 1
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR2L2 olfactory receptor, family 2, subfamily L, member 2
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR4D2 olfactory receptor, family 4, subfamily D, member 2
OR4K1 olfactory receptor, family 4, subfamily K, member 1
OR52B4 olfactory receptor, family 52, subfamily B, member 4 (gene/pseudogene)
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OR5B3 olfactory receptor, family 5, subfamily B, member 3
OR6V1 olfactory receptor, family 6, subfamily V, member 1
OR9A4 olfactory receptor, family 9, subfamily A, member 4
PAGE2B P antigen family, member 2B
PCDHB16 protocadherin beta 16
PCDHGB8P protocadherin gamma subfamily B, 8 pseudogene
PDPR pyruvate dehydrogenase phosphatase regulatory subunit
PHLDB1 pleckstrin homology-like domain, family B, member 1
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
PITX3 paired-like homeodomain 3
PLA2G7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
PLXNA3 plexin A3
PLXNB3 plexin B3
PNPLA1 patatin-like phospholipase domain containing 1
PPP1R2P1 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 1
PPP1R3A protein phosphatase 1, regulatory subunit 3A
PRSS21 protease, serine, 21 (testisin)
PTCHD3 patched domain containing 3
PYCR1 pyrroline-5-carboxylate reductase 1
RAB39B RAB39B, member RAS oncogene family
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated)
RCL1 RNA terminal phosphate cyclase-like 1
REEP3 receptor accessory protein 3
REM1 RAS (RAD and GEM)-like GTP-binding 1
RPL10 ribosomal protein L10
RSPO3 R-spondin 3
S100A12 S100 calcium binding protein A12
SCCPDH saccharopine dehydrogenase (putative)
SCN10A sodium channel, voltage gated, type X alpha subunit
SEPT12 septin 12
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SIK3 SIK family kinase 3
SIRT2 sirtuin 2
SLC36A2 solute carrier family 36 (proton/amino acid symporter), member 2
SLC36A3 solute carrier family 36, member 3
SLC44A1 solute carrier family 44 (choline transporter), member 1
SLED1 proteoglycan 3 pseudogene
SNHG4 small nucleolar RNA host gene 4
SOAT2 sterol O-acyltransferase 2
SPAG9 sperm associated antigen 9
SPINK9 serine peptidase inhibitor, Kazal type 9
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
STON1-GTF2A1L STON1-GTF2A1L readthrough
STRN3 striatin, calmodulin binding protein 3
SUMO1P1 SUMO1 pseudogene 1
TARS threonyl-tRNA synthetase
TAS2R1 taste receptor, type 2, member 1
TAS2R43 taste receptor, type 2, member 43
TAS2R60 taste receptor, type 2, member 60
TCEB3C transcription elongation factor B polypeptide 3C (elongin A3)
TCHH trichohyalin
TEX37 testis expressed 37
TMIGD1 transmembrane and immunoglobulin domain containing 1
TMLHE trimethyllysine hydroxylase, epsilon
TPTE transmembrane phosphatase with tensin homology
TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1
TREH trehalase (brush-border membrane glycoprotein)
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate)
TSPYL6 TSPY-like 6
TUBB7P tubulin, beta 7, pseudogene
TXLNGY taxilin gamma pseudogene, Y-linked
USP17L6P ubiquitin specific peptidase 17-like family member 6, pseudogene
USP44 ubiquitin specific peptidase 44
VAMP7 vesicle-associated membrane protein 7
VBP1 von Hippel-Lindau binding protein 1
VCAN versican
VNN1 vanin 1
VNN3 vanin 3
YARS tyrosyl-tRNA synthetase
ZFYVE16 zinc finger, FYVE domain containing 16
ZNF202 zinc finger protein 202
ZNF77 zinc finger protein 77
ZPR1 ZPR1 zinc finger

low expression

Symbol Name
FAM210A family with sequence similarity 210, member A
RAB12 RAB12, member RAS oncogene family