Brain Lower Grade Glioma_LGG_TCGA-HT-7855-01A-11R-2403-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

326 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-7855-01A-11R-2403-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ADHFE1 alcohol dehydrogenase, iron containing, 1
AFF4 AF4/FMR2 family, member 4
AGAP11 ankyrin repeat and GTPase domain Arf GTPase activating protein 11
AGO2 argonaute RISC catalytic component 2
AHCTF1 AT hook containing transcription factor 1
AHCYL1 adenosylhomocysteinase-like 1
AHNAK AHNAK nucleoprotein
AKAP1 A kinase (PRKA) anchor protein 1
ANGPT4 angiopoietin 4
ANKRD17 ankyrin repeat domain 17
ANKRD27 ankyrin repeat domain 27 (VPS9 domain)
ANKRD28 ankyrin repeat domain 28
ANKRD44 ankyrin repeat domain 44
ANKRD46 ankyrin repeat domain 46
AOC2 amine oxidase, copper containing 2 (retina-specific)
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ARHGAP24 Rho GTPase activating protein 24
ARHGAP32 Rho GTPase activating protein 32
ARID1A AT rich interactive domain 1A (SWI-like)
ASPH aspartate beta-hydroxylase
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide
ATP8B2 ATPase, aminophospholipid transporter, class I, type 8B, member 2
BARD1 BRCA1 associated RING domain 1
BAZ2A bromodomain adjacent to zinc finger domain, 2A
BCAR1 breast cancer anti-estrogen resistance 1
BCAR4 breast cancer anti-estrogen resistance 4 (non-protein coding)
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide
BCL6 B-cell CLL/lymphoma 6
BCL9L B-cell CLL/lymphoma 9-like
BICD2 bicaudal D homolog 2 (Drosophila)
BMF Bcl2 modifying factor
BTBD8 BTB (POZ) domain containing 8
BTF3L4 basic transcription factor 3-like 4
C8ORF44 chromosome 8 open reading frame 44
CASZ1 castor zinc finger 1
CCDC144A coiled-coil domain containing 144A
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC88C coiled-coil domain containing 88C
CDC14A cell division cycle 14A
CDH20 cadherin 20, type 2
CELF2 CUGBP, Elav-like family member 2
CFAP97 cilia and flagella associated protein 97
CHD2 chromodomain helicase DNA binding protein 2
CHD7 chromodomain helicase DNA binding protein 7
CLASP1 cytoplasmic linker associated protein 1
CLEC16A C-type lectin domain family 16, member A
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNN2 calponin 2
CNTN3 contactin 3 (plasmacytoma associated)
COL6A4P2 collagen, type VI, alpha 4 pseudogene 2
CPNE3 copine III
CRB1 crumbs family member 1, photoreceptor morphogenesis associated
CSNK2A1 casein kinase 2, alpha 1 polypeptide
CSNK2A3 casein kinase 2, alpha 3 polypeptide
CST8 cystatin 8 (cystatin-related epididymal specific)
CXXC4 CXXC finger protein 4
CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DBT dihydrolipoamide branched chain transacylase E2
DCAF12 DDB1 and CUL4 associated factor 12
DCAF8 DDB1 and CUL4 associated factor 8
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
DHTKD1 dehydrogenase E1 and transketolase domain containing 1
DIAPH2 diaphanous-related formin 2
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila)
DNM3 dynamin 3
DSCAM Down syndrome cell adhesion molecule
EFCAB5 EF-hand calcium binding domain 5
EML5 echinoderm microtubule associated protein like 5
EP300 E1A binding protein p300
EQTN equatorin, sperm acrosome associated
ERVFRD-1 endogenous retrovirus group FRD, member 1
EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit
FAM106A family with sequence similarity 106, member A
FAM106CP family with sequence similarity 106, member C, pseudogene
FAM110A family with sequence similarity 110, member A
FAM157A family with sequence similarity 157, member A
FAM182B family with sequence similarity 182, member B
FAM222B family with sequence similarity 222, member B
FAM46C family with sequence similarity 46, member C
FAM60A family with sequence similarity 60, member A
FAM92A1 family with sequence similarity 92, member A1
FASTKD5 FAST kinase domains 5
FAT1 FAT atypical cadherin 1
FBXO46 F-box protein 46
FCHSD2 FCH and double SH3 domains 2
FLJ13224 uncharacterized LOC79857
FOXD4L5 forkhead box D4-like 5
FOXE1 forkhead box E1
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
GCLC glutamate-cysteine ligase, catalytic subunit
GK2 glycerol kinase 2
GLRA3 glycine receptor, alpha 3
GOLGA6A golgin A6 family, member A
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GPATCH8 G patch domain containing 8
GPX3 glutathione peroxidase 3
HELZ helicase with zinc finger
HINFP histone H4 transcription factor
HOXA13 homeobox A13
HRCT1 histidine rich carboxyl terminus 1
IFNAR2 interferon (alpha, beta and omega) receptor 2
IGSF9B immunoglobulin superfamily, member 9B
JADE1 jade family PHD finger 1
JARID2 jumonji, AT rich interactive domain 2
JMJD1C jumonji domain containing 1C
JPH2 junctophilin 2
JRK Jrk homolog (mouse)
JRKL JRK-like
KANK2 KN motif and ankyrin repeat domains 2
KANSL1 KAT8 regulatory NSL complex subunit 1
KANSL1L KAT8 regulatory NSL complex subunit 1-like
KDM3B lysine (K)-specific demethylase 3B
KLHL13 kelch-like family member 13
KRTAP2-1 keratin associated protein 2-1
KSR2 kinase suppressor of ras 2
L2HGDH L-2-hydroxyglutarate dehydrogenase
LCORL ligand dependent nuclear receptor corepressor-like
LDLRAD3 low density lipoprotein receptor class A domain containing 3
LGSN lengsin, lens protein with glutamine synthetase domain
LHX1 LIM homeobox 1
LIN52 lin-52 DREAM MuvB core complex component
LINC00161 long intergenic non-protein coding RNA 161
LOC100129055 cyclin Y-like 1 pseudogene
LOC728989 phosphodiesterase 4D interacting protein pseudogene
LONRF3 LON peptidase N-terminal domain and ring finger 3
LRIG2 leucine-rich repeats and immunoglobulin-like domains 2
LRRN4 leucine rich repeat neuronal 4
LSAMP limbic system-associated membrane protein
MAML2 mastermind-like 2 (Drosophila)
MAN1A2 mannosidase, alpha, class 1A, member 2
MAPT microtubule-associated protein tau
MARCH8 membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
MARS2 methionyl-tRNA synthetase 2, mitochondrial
MAVS mitochondrial antiviral signaling protein
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta)
MKLN1 muskelin 1, intracellular mediator containing kelch motifs
MOB3B MOB kinase activator 3B
MT1X metallothionein 1X
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
N4BP2L2 NEDD4 binding protein 2-like 2
NAV2 neuron navigator 2
NBPF3 neuroblastoma breakpoint family, member 3
NCOA3 nuclear receptor coactivator 3
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
NFIC nuclear factor I/C (CCAAT-binding transcription factor)
NFRKB nuclear factor related to kappaB binding protein
NFX1 nuclear transcription factor, X-box binding 1
NHSL2 NHS-like 2
NKAP NFKB activating protein
NME1-NME2 NME1-NME2 readthrough
NMT1 N-myristoyltransferase 1
NMUR2 neuromedin U receptor 2
NRTN neurturin
NSMAF neutral sphingomyelinase (N-SMase) activation associated factor
NUMA1 nuclear mitotic apparatus protein 1
OCLN occludin
OR13C9 olfactory receptor, family 13, subfamily C, member 9
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OR5B21 olfactory receptor, family 5, subfamily B, member 21
OR6T1 olfactory receptor, family 6, subfamily T, member 1
PANX3 pannexin 3
PARD3 par-3 family cell polarity regulator
PARS2 prolyl-tRNA synthetase 2, mitochondrial (putative)
PAX1 paired box 1
PCDH15 protocadherin-related 15
PCDHA5 protocadherin alpha 5
PCDHB17P protocadherin beta 17 pseudogene
PCDHB4 protocadherin beta 4
PCDHGB2 protocadherin gamma subfamily B, 2
PCDHGB3 protocadherin gamma subfamily B, 3
PCF11 PCF11 cleavage and polyadenylation factor subunit
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
PDE4DIP phosphodiesterase 4D interacting protein
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PHF20 PHD finger protein 20
PHF3 PHD finger protein 3
PHLDB1 pleckstrin homology-like domain, family B, member 1
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
POM121C POM121 transmembrane nucleoporin C
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PPM1N protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
PPP5C protein phosphatase 5, catalytic subunit
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha
PRMT9 protein arginine methyltransferase 9
PRRC2A proline-rich coiled-coil 2A
PRSS37 protease, serine, 37
PRSS55 protease, serine, 55
PRUNE2 prune homolog 2 (Drosophila)
PTK2 protein tyrosine kinase 2
PUM1 pumilio RNA-binding family member 1
PYGO1 pygopus family PHD finger 1
RABGAP1 RAB GTPase activating protein 1
RBBP6 retinoblastoma binding protein 6
RBL2 retinoblastoma-like 2
RBM12B RNA binding motif protein 12B
RBM14 RNA binding motif protein 14
RC3H2 ring finger and CCCH-type domains 2
RHOBTB3 Rho-related BTB domain containing 3
RICTOR RPTOR independent companion of MTOR, complex 2
RNF150 ring finger protein 150
RNF24 ring finger protein 24
RNF39 ring finger protein 39
RPRD2 regulation of nuclear pre-mRNA domain containing 2
RSBN1 round spermatid basic protein 1
SAMD13 sterile alpha motif domain containing 13
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SENP8 SUMO/sentrin specific peptidase family member 8
SERINC5 serine incorporator 5
SFTPA2 surfactant protein A2
SIK3 SIK family kinase 3
SIX1 SIX homeobox 1
SIX4 SIX homeobox 4
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SMAD3 SMAD family member 3
SNORA55 small nucleolar RNA, H/ACA box 55
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12)
SPEN spen family transcriptional repressor
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1
SSH2 slingshot protein phosphatase 2
STAT5B signal transducer and activator of transcription 5B
SUGT1P1 SUGT1 pseudogene 1
SUGT1P3 SUGT1 pseudogene 3
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
SYCP2L synaptonemal complex protein 2-like
SYPL2 synaptophysin-like 2
SYTL4 synaptotagmin-like 4
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
TARP TCR gamma alternate reading frame protein
TAS2R10 taste receptor, type 2, member 10
TAS2R7 taste receptor, type 2, member 7
TBC1D14 TBC1 domain family, member 14
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TET2 tet methylcytosine dioxygenase 2
TLDC2 TBC/LysM-associated domain containing 2
TMCC1 transmembrane and coiled-coil domain family 1
TMEFF2 transmembrane protein with EGF-like and two follistatin-like domains 2
TMEM57 transmembrane protein 57
TNK1 tyrosine kinase, non-receptor, 1
TNNI3K TNNI3 interacting kinase
TNRC6A trinucleotide repeat containing 6A
TNS2 tensin 2
TOB2 transducer of ERBB2, 2
TREH trehalase (brush-border membrane glycoprotein)
TRIM27 tripartite motif containing 27
TRIM60 tripartite motif containing 60
TSC22D1 TSC22 domain family, member 1
TTC17 tetratricopeptide repeat domain 17
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
TXNDC16 thioredoxin domain containing 16
TYW5 tRNA-yW synthesizing protein 5
UBAP2 ubiquitin associated protein 2
UBAP2L ubiquitin associated protein 2-like
UBR5 ubiquitin protein ligase E3 component n-recognin 5
URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase
USP54 ubiquitin specific peptidase 54
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
VCAN versican
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
WDR26 WD repeat domain 26
YLPM1 YLP motif containing 1
YTHDC1 YTH domain containing 1
ZBED3 zinc finger, BED-type containing 3
ZCCHC6 zinc finger, CCHC domain containing 6
ZHX2 zinc fingers and homeoboxes 2
ZKSCAN8 zinc finger with KRAB and SCAN domains 8
ZNF134 zinc finger protein 134
ZNF146 zinc finger protein 146
ZNF160 zinc finger protein 160
ZNF175 zinc finger protein 175
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF274 zinc finger protein 274
ZNF275 zinc finger protein 275
ZNF366 zinc finger protein 366
ZNF431 zinc finger protein 431
ZNF507 zinc finger protein 507
ZNF516 zinc finger protein 516
ZNF526 zinc finger protein 526
ZNF548 zinc finger protein 548
ZNF549 zinc finger protein 549
ZNF550 zinc finger protein 550
ZNF551 zinc finger protein 551
ZNF573 zinc finger protein 573
ZNF585A zinc finger protein 585A
ZNF585B zinc finger protein 585B
ZNF587 zinc finger protein 587
ZNF594 zinc finger protein 594
ZNF609 zinc finger protein 609
ZNF614 zinc finger protein 614
ZNF623 zinc finger protein 623
ZNF671 zinc finger protein 671
ZNF705D zinc finger protein 705D
ZNF766 zinc finger protein 766
ZNF813 zinc finger protein 813
ZNF827 zinc finger protein 827
ZNF843 zinc finger protein 843
ZNRF3 zinc and ring finger 3
ZSWIM5 zinc finger, SWIM-type containing 5

low expression

Symbol Name
ATG16L1 autophagy related 16-like 1 (S. cerevisiae)
ATXN7L1 ataxin 7-like 1
CAB39 calcium binding protein 39
COPS7B COP9 signalosome subunit 7B
COPS8 COP9 signalosome subunit 8
DIS3L2 DIS3 like 3'-5' exoribonuclease 2
EIF4E2 eukaryotic translation initiation factor 4E family member 2
FBXL22 F-box and leucine-rich repeat protein 22
FUNDC1 FUN14 domain containing 1
HDLBP high density lipoprotein binding protein
MLH3 mutL homolog 3
MRPL35 mitochondrial ribosomal protein L35
NCL nucleolin
NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa
PPP1R7 protein phosphatase 1, regulatory subunit 7
SLMO2 slowmo homolog 2 (Drosophila)
SMIM15 small integral membrane protein 15
SNX21 sorting nexin family member 21
STK25 serine/threonine kinase 25
THAP4 THAP domain containing 4
UBE2F ubiquitin-conjugating enzyme E2F (putative)