Brain Lower Grade Glioma_LGG_TCGA-FG-A70Y-01A-12R-A34R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

279 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-FG-A70Y-01A-12R-A34R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD17A abhydrolase domain containing 17A
ABI1 abl-interactor 1
ABLIM3 actin binding LIM protein family, member 3
ACY3 aminoacylase 3
ADD1 adducin 1 (alpha)
ADRB2 adrenoceptor beta 2, surface
AHCYL1 adenosylhomocysteinase-like 1
ALDH7A1 aldehyde dehydrogenase 7 family, member A1
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
ANGPT4 angiopoietin 4
ANKRD16 ankyrin repeat domain 16
ANKRD46 ankyrin repeat domain 46
ANXA9 annexin A9
APMAP adipocyte plasma membrane associated protein
APOE apolipoprotein E
APPL2 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
ASCL4 achaete-scute family bHLH transcription factor 4
ASIP agouti signaling protein
ASPRV1 aspartic peptidase, retroviral-like 1
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
BAALC brain and acute leukemia, cytoplasmic
C10ORF54 chromosome 10 open reading frame 54
C12ORF56 chromosome 12 open reading frame 56
C5ORF38 chromosome 5 open reading frame 38
C8ORF76 chromosome 8 open reading frame 76
CARD14 caspase recruitment domain family, member 14
CCER1 coiled-coil glutamate-rich protein 1
CD81 CD81 molecule
CDC123 cell division cycle 123
CDX1 caudal type homeobox 1
CEACAM22P carcinoembryonic antigen-related cell adhesion molecule 22, pseudogene
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CEP70 centrosomal protein 70kDa
CES5A carboxylesterase 5A
CIB1 calcium and integrin binding 1 (calmyrin)
CIT citron rho-interacting serine/threonine kinase
CLCA2 chloride channel accessory 2
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
CLPTM1 cleft lip and palate associated transmembrane protein 1
CLTCL1 clathrin, heavy chain-like 1
CNTN3 contactin 3 (plasmacytoma associated)
COX6C cytochrome c oxidase subunit VIc
CPA2 carboxypeptidase A2 (pancreatic)
CPB1 carboxypeptidase B1 (tissue)
CPT2 carnitine palmitoyltransferase 2
CSF1 colony stimulating factor 1 (macrophage)
CSF1R colony stimulating factor 1 receptor
CTSV cathepsin V
CYB5R4 cytochrome b5 reductase 4
DCAKD dephospho-CoA kinase domain containing
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
DEFB108B defensin, beta 108B
DHRS3 dehydrogenase/reductase (SDR family) member 3
DHTKD1 dehydrogenase E1 and transketolase domain containing 1
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DLL3 delta-like 3 (Drosophila)
DNAH17 dynein, axonemal, heavy chain 17
DNM2 dynamin 2
DPEP3 dipeptidase 3
DPPA3 developmental pluripotency associated 3
DPY19L4 dpy-19-like 4 (C. elegans)
DTX4 deltex 4, E3 ubiquitin ligase
EIF3H eukaryotic translation initiation factor 3, subunit H
EMC2 ER membrane protein complex subunit 2
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
FAM118A family with sequence similarity 118, member A
FAM205BP transmembrane protein C9orf144B pseudogene
FAM213A family with sequence similarity 213, member A
FAM214B family with sequence similarity 214, member B
FAM228A family with sequence similarity 228, member A
FAM3B family with sequence similarity 3, member B
FAM92A1 family with sequence similarity 92, member A1
FAM92A1P2 family with sequence similarity 92, member A3
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FBXO18 F-box protein, helicase, 18
FBXO7 F-box protein 7
FBXW4 F-box and WD repeat domain containing 4
FCGR1B Fc fragment of IgG, high affinity Ib, receptor (CD64)
FDCSP follicular dendritic cell secreted protein
FGL1 fibrinogen-like 1
FSCB fibrous sheath CABYR binding protein
FTH1P3 ferritin, heavy polypeptide 1 pseudogene 3
GALR3 galanin receptor 3
GATSL3 GATS protein-like 3
GCLC glutamate-cysteine ligase, catalytic subunit
GDF10 growth differentiation factor 10
GDF2 growth differentiation factor 2
GDI2 GDP dissociation inhibitor 2
GHRH growth hormone releasing hormone
GHRL ghrelin/obestatin prepropeptide
GLDN gliomedin
GLI4 GLI family zinc finger 4
GLTPD2 glycolipid transfer protein domain containing 2
GP9 glycoprotein IX (platelet)
GPAM glycerol-3-phosphate acyltransferase, mitochondrial
HACD3 3-hydroxyacyl-CoA dehydratase 3
HADH hydroxyacyl-CoA dehydrogenase
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HAND1 heart and neural crest derivatives expressed 1
HAPLN2 hyaluronan and proteoglycan link protein 2
HAVCR1 hepatitis A virus cellular receptor 1
HBQ1 hemoglobin, theta 1
HES4 hes family bHLH transcription factor 4
HHLA2 HERV-H LTR-associating 2
HIST1H4F histone cluster 1, H4f
HMGB4 high mobility group box 4
HRCT1 histidine rich carboxyl terminus 1
HRSP12 heat-responsive protein 12
IDI1 isopentenyl-diphosphate delta isomerase 1
IDI2 isopentenyl-diphosphate delta isomerase 2
IFNGR1 interferon gamma receptor 1
IL3 interleukin 3
IRF8 interferon regulatory factor 8
ITGA6 integrin, alpha 6
JPH2 junctophilin 2
KCNMB4 potassium channel subfamily M regulatory beta subunit 4
KHDC3L KH domain containing 3-like, subcortical maternal complex member
KIAA0196 KIAA0196
KIAA2013 KIAA2013
KIN Kin17 DNA and RNA binding protein
KRTAP4-4 keratin associated protein 4-4
LAPTM4A lysosomal protein transmembrane 4 alpha
LARP4B La ribonucleoprotein domain family, member 4B
LINC00515 long intergenic non-protein coding RNA 515
LOC340074 uncharacterized LOC340074
LOC389033 placenta-specific 9 pseudogene
LTC4S leukotriene C4 synthase
LYL1 lymphoblastic leukemia associated hematopoiesis regulator 1
MARCKSL1 MARCKS-like 1
MARVELD3 MARVEL domain containing 3
MBL2 mannose-binding lectin (protein C) 2, soluble
MCUR1 mitochondrial calcium uniporter regulator 1
MRC1 mannose receptor, C type 1
MRPL13 mitochondrial ribosomal protein L13
MTA2 metastasis associated 1 family, member 2
MYOZ2 myozenin 2
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit
NDRG1 N-myc downstream regulated 1
NDRG2 NDRG family member 2
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa
NFS1 NFS1 cysteine desulfurase
NKAIN4 Na+/K+ transporting ATPase interacting 4
NLRP13 NLR family, pyrin domain containing 13
NPVF neuropeptide VF precursor
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae)
NUDT16L1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
NUTM1 NUT midline carcinoma, family member 1
NXN nucleoredoxin
OR10R2 olfactory receptor, family 10, subfamily R, member 2
OR10S1 olfactory receptor, family 10, subfamily S, member 1
OR11L1 olfactory receptor, family 11, subfamily L, member 1
OR13H1 olfactory receptor, family 13, subfamily H, member 1
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR2H2 olfactory receptor, family 2, subfamily H, member 2
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR4F5 olfactory receptor, family 4, subfamily F, member 5
OR51G2 olfactory receptor, family 51, subfamily G, member 2
OR51I1 olfactory receptor, family 51, subfamily I, member 1
OR52K1 olfactory receptor, family 52, subfamily K, member 1
OR56A3 olfactory receptor, family 56, subfamily A, member 3
OR5D14 olfactory receptor, family 5, subfamily D, member 14
OR5M10 olfactory receptor, family 5, subfamily M, member 10
OR6K3 olfactory receptor, family 6, subfamily K, member 3
OR6X1 olfactory receptor, family 6, subfamily X, member 1
OR8B8 olfactory receptor, family 8, subfamily B, member 8
OR9Q2 olfactory receptor, family 9, subfamily Q, member 2
PACS2 phosphofurin acidic cluster sorting protein 2
PCCA propionyl CoA carboxylase, alpha polypeptide
PCDHA1 protocadherin alpha 1
PCDHGA12 protocadherin gamma subfamily A, 12
PCSK1N proprotein convertase subtilisin/kexin type 1 inhibitor
PEX7 peroxisomal biogenesis factor 7
PFKP phosphofructokinase, platelet
PHF20L1 PHD finger protein 20-like 1
PLAC8L1 PLAC8-like 1
PLIN3 perilipin 3
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
PMM1 phosphomannomutase 1
POTEB POTE ankyrin domain family, member B
PPA2 pyrophosphatase (inorganic) 2
PPP2R5A protein phosphatase 2, regulatory subunit B', alpha
PPY2P pancreatic polypeptide 2, pseudogene
PRKX protein kinase, X-linked
PRLHR prolactin releasing hormone receptor
PRR23C proline rich 23C
PRR27 proline rich 27
PRX periaxin
PSG8 pregnancy specific beta-1-glycoprotein 8
PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding)
RAB41 RAB41, member RAS oncogene family
RAD21 RAD21 homolog (S. pombe)
RASA4 RAS p21 protein activator 4
RASL10A RAS-like, family 10, member A
RBM17 RNA binding motif protein 17
RETN resistin
RFPL3 ret finger protein-like 3
RGS10 regulator of G-protein signaling 10
RGS21 regulator of G-protein signaling 21
RMDN1 regulator of microtubule dynamics 1
RNASET2 ribonuclease T2
RNF139 ring finger protein 139
SCRG1 stimulator of chondrogenesis 1
SEC14L2 SEC14-like 2 (S. cerevisiae)
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
SIGLEC8 sialic acid binding Ig-like lectin 8
SIRPD signal-regulatory protein delta
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC22A24 solute carrier family 22, member 24
SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SLC34A1 solute carrier family 34 (type II sodium/phosphate cotransporter), member 1
SLC39A11 solute carrier family 39, member 11
SLC9A9 solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9
SLCO1B3 solute carrier organic anion transporter family, member 1B3
SMEK3P SMEK homolog 3, suppressor of mek1 (Dictyostelium) pseudogene
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA5B small nucleolar RNA, H/ACA box 5B
SNORA61 small nucleolar RNA, H/ACA box 61
SNORA68 small nucleolar RNA, H/ACA box 68
SNORA79 small nucleolar RNA, H/ACA box 79
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
SNX31 sorting nexin 31
SOWAHD sosondowah ankyrin repeat domain family member D
SPANXA2 SPANX family, member A2
SPRR3 small proline-rich protein 3
SQLE squalene epoxidase
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
ST7-OT4 ST7 overlapping transcript 4
STK3 serine/threonine kinase 3
STON2 stonin 2
SUGCT succinyl-CoA:glutarate-CoA transferase
SUMO1P1 SUMO1 pseudogene 1
SUPT20HL2 suppressor of Ty 20 homolog (S. cerevisiae)-like 2
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TARM1 T cell-interacting, activating receptor on myeloid cells 1
TATDN1 TatD DNase domain containing 1
TBC1D3H TBC1 domain family, member 3H
TBX2 T-box 2
THEM6 thioesterase superfamily member 6
TK2 thymidine kinase 2, mitochondrial
TMEM119 transmembrane protein 119
TMEM236 transmembrane protein 236
TMEM30C transmembrane protein 30C
TMEM88B transmembrane protein 88B
TMIGD2 transmembrane and immunoglobulin domain containing 2
TNIP2 TNFAIP3 interacting protein 2
TPGS1 tubulin polyglutamylase complex subunit 1
TRAPPC9 trafficking protein particle complex 9
TRIM16L tripartite motif containing 16-like
TRIM53AP tripartite motif containing 53A, pseudogene
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae)
TSPAN15 tetraspanin 15
TSPAN8 tetraspanin 8
TTC36 tetratricopeptide repeat domain 36
TTYH1 tweety family member 1
UBE2D2 ubiquitin-conjugating enzyme E2D 2
UBTD1 ubiquitin domain containing 1
USP54 ubiquitin specific peptidase 54
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
WBP2NL WBP2 N-terminal like
WDR37 WD repeat domain 37
WDYHV1 WDYHV motif containing 1
WFDC12 WAP four-disulfide core domain 12
WFDC6 WAP four-disulfide core domain 6
ZDHHC14 zinc finger, DHHC-type containing 14
ZDHHC19 zinc finger, DHHC-type containing 19
ZHX2 zinc fingers and homeoboxes 2
ZMYND11 zinc finger, MYND-type containing 11
ZNF572 zinc finger protein 572
ZNF579 zinc finger protein 579
ZNF706 zinc finger protein 706
ZNF771 zinc finger protein 771

low expression

Symbol Name
RAD50 RAD50 homolog (S. cerevisiae)
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1