Brain Lower Grade Glioma_LGG_TCGA-FG-8187-01A-11R-2256-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

409 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-FG-8187-01A-11R-2256-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AATK apoptosis-associated tyrosine kinase
ABCA2 ATP-binding cassette, sub-family A (ABC1), member 2
ABCA8 ATP-binding cassette, sub-family A (ABC1), member 8
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ABHD17B abhydrolase domain containing 17B
ACOT6 acyl-CoA thioesterase 6
ACY3 aminoacylase 3
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional)
ADRA1A adrenoceptor alpha 1A
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4
ALAD aminolevulinate dehydratase
ALDOB aldolase B, fructose-bisphosphate
AMER2 APC membrane recruitment protein 2
AMPD3 adenosine monophosphate deaminase 3
ANKRD40 ankyrin repeat domain 40
ANLN anillin, actin binding protein
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
APOM apolipoprotein M
AQP4-AS1 AQP4 antisense RNA 1
ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
ARHGAP21 Rho GTPase activating protein 21
ARHGAP23 Rho GTPase activating protein 23
ARHGEF37 Rho guanine nucleotide exchange factor (GEF) 37
ARRDC2 arrestin domain containing 2
ASCL3 achaete-scute family bHLH transcription factor 3
ASPA aspartoacylase
ATXN3L ataxin 3-like
BBIP1 BBSome interacting protein 1
BEST1 bestrophin 1
BIRC6 baculoviral IAP repeat containing 6
BOK BCL2-related ovarian killer
C10ORF128 chromosome 10 open reading frame 128
C10ORF90 chromosome 10 open reading frame 90
C14ORF28 chromosome 14 open reading frame 28
C21ORF91 chromosome 21 open reading frame 91
C2ORF61 chromosome 2 open reading frame 61
C7ORF34 chromosome 7 open reading frame 34
C9ORF139 chromosome 9 open reading frame 139
C9ORF153 chromosome 9 open reading frame 153
C9ORF43 chromosome 9 open reading frame 43
CAPN9 calpain 9
CARNS1 carnosine synthase 1
CATSPER2P1 cation channel, sperm associated 2 pseudogene 1
CBR1 carbonyl reductase 1
CCDC53 coiled-coil domain containing 53
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCL3L3 chemokine (C-C motif) ligand 3-like 3
CCNI2 cyclin I family, member 2
CCP110 centriolar coiled coil protein 110kDa
CDC42EP2 CDC42 effector protein (Rho GTPase binding) 2
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CEP85 centrosomal protein 85kDa
CERCAM cerebral endothelial cell adhesion molecule
CFL2 cofilin 2 (muscle)
CH25H cholesterol 25-hydroxylase
CHMP2B charged multivesicular body protein 2B
CHN2 chimerin 2
CHP2 calcineurin-like EF-hand protein 2
CHRAC1 chromatin accessibility complex 1
CHRM5 cholinergic receptor, muscarinic 5
CLCA4 chloride channel accessory 4
CLDN11 claudin 11
CLDN25 claudin 25
CLDND1 claudin domain containing 1
CLEC4F C-type lectin domain family 4, member F
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family)
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
CNTN2 contactin 2 (axonal)
CNTNAP4 contactin associated protein-like 4
COL4A5 collagen, type IV, alpha 5
COLCA1 colorectal cancer associated 1
COLCA2 colorectal cancer associated 2
CPA2 carboxypeptidase A2 (pancreatic)
CPEB1 cytoplasmic polyadenylation element binding protein 1
CPOX coproporphyrinogen oxidase
CPPED1 calcineurin-like phosphoesterase domain containing 1
CRISP1 cysteine-rich secretory protein 1
CSRP1 cysteine and glycine-rich protein 1
CTNNA3 catenin (cadherin-associated protein), alpha 3
DAAM2 dishevelled associated activator of morphogenesis 2
DAO D-amino-acid oxidase
DAPK2 death-associated protein kinase 2
DBNDD2 dysbindin (dystrobrevin binding protein 1) domain containing 2
DFNB31 deafness, autosomal recessive 31
DHCR24 24-dehydrocholesterol reductase
DMRTA1 DMRT-like family A1
DMRTC2 DMRT-like family C2
DNAH17 dynein, axonemal, heavy chain 17
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DOCK5 dedicator of cytokinesis 5
DPPA3 developmental pluripotency associated 3
DPYSL5 dihydropyrimidinase-like 5
DST dystonin
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2
EDIL3 EGF-like repeats and discoidin I-like domains 3
ELOVL1 ELOVL fatty acid elongase 1
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2
ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6
EQTN equatorin, sperm acrosome associated
ERMN ermin, ERM-like protein
ESX1 ESX homeobox 1
EVI2A ecotropic viral integration site 2A
EXPH5 exophilin 5
FA2H fatty acid 2-hydroxylase
FAAH fatty acid amide hydrolase
FAM107B family with sequence similarity 107, member B
FAM124A family with sequence similarity 124A
FAM131C family with sequence similarity 131, member C
FAM149B1 family with sequence similarity 149, member B1
FAM189A2 family with sequence similarity 189, member A2
FAM19A4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4
FAR1 fatty acyl CoA reductase 1
FAT3 FAT atypical cadherin 3
FAXDC2 fatty acid hydroxylase domain containing 2
FGF6 fibroblast growth factor 6
FGFR2 fibroblast growth factor receptor 2
FMNL2 formin-like 2
FNBP1 formin binding protein 1
FNTB farnesyltransferase, CAAX box, beta
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FOLH1B folate hydrolase 1B
FRK fyn-related Src family tyrosine kinase
FRMPD2 FERM and PDZ domain containing 2
FRYL FRY-like
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
GADD45G growth arrest and DNA-damage-inducible, gamma
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6
GCA grancalcin, EF-hand calcium binding protein
GHSR growth hormone secretagogue receptor
GINS3 GINS complex subunit 3 (Psf3 homolog)
GJB1 gap junction protein, beta 1, 32kDa
GJC2 gap junction protein, gamma 2, 47kDa
GLTP glycolipid transfer protein
GOLGA8IP golgin A8 family, member I, pseudogene
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
GPR37 G protein-coupled receptor 37 (endothelin receptor type B-like)
GPR62 G protein-coupled receptor 62
GPRC5B G protein-coupled receptor, class C, group 5, member B
GRAMD1C GRAM domain containing 1C
HAPLN2 hyaluronan and proteoglycan link protein 2
HBS1L HBS1-like translational GTPase
HDAC11 histone deacetylase 11
HERC2P2 hect domain and RLD 2 pseudogene 2
HHATL hedgehog acyltransferase-like
HHIP hedgehog interacting protein
HMGB4 high mobility group box 4
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HOXD1 homeobox D1
HPN hepsin
HPR haptoglobin-related protein
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5
HSPA2 heat shock 70kDa protein 2
HSPB8 heat shock 22kDa protein 8
HVCN1 hydrogen voltage gated channel 1
HYMAI hydatidiform mole associated and imprinted (non-protein coding)
IFNB1 interferon, beta 1, fibroblast
IL17D interleukin 17D
IL1B interleukin 1, beta
IL9 interleukin 9
INTU inturned planar cell polarity protein
IP6K3 inositol hexakisphosphate kinase 3
IQCA1 IQ motif containing with AAA domain 1
IQCK IQ motif containing K
JUND jun D proto-oncogene
KANK4 KN motif and ankyrin repeat domains 4
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
KEL Kell blood group, metallo-endopeptidase
KIAA0930 KIAA0930
KIAA1598
KIF13B kinesin family member 13B
KIF1C kinesin family member 1C
KIF25 kinesin family member 25
KIF6 kinesin family member 6
KLHDC1 kelch domain containing 1
KLHL32 kelch-like family member 32
KLK6 kallikrein-related peptidase 6
KRT37 keratin 37, type I
KRT83 keratin 83, type II
KRTAP4-8 keratin associated protein 4-8
KRTAP5-11 keratin associated protein 5-11
KRTAP5-3 keratin associated protein 5-3
KSR2 kinase suppressor of ras 2
LACC1 laccase (multicopper oxidoreductase) domain containing 1
LAMP2 lysosomal-associated membrane protein 2
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial)
LCN12 lipocalin 12
LDB3 LIM domain binding 3
LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase
LIFR leukemia inhibitory factor receptor alpha
LINC00320 long intergenic non-protein coding RNA 320
LINC00323 long intergenic non-protein coding RNA 323
LINC00597 long intergenic non-protein coding RNA 597
LIPE lipase, hormone-sensitive
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LOC340074 uncharacterized LOC340074
LOC389033 placenta-specific 9 pseudogene
LPAR1 lysophosphatidic acid receptor 1
LRP2 low density lipoprotein receptor-related protein 2
LURAP1 leucine rich adaptor protein 1
MAG myelin associated glycoprotein
MAP6D1 MAP6 domain containing 1
MAP7 microtubule-associated protein 7
MBNL2 muscleblind-like splicing regulator 2
MBP myelin basic protein
MDN1 MDN1, midasin homolog (yeast)
MGC16025 uncharacterized LOC85009
MID1IP1 MID1 interacting protein 1
MLNR motilin receptor
MOB3B MOB kinase activator 3B
MOBP myelin-associated oligodendrocyte basic protein
MOG myelin oligodendrocyte glycoprotein
MOGAT3 monoacylglycerol O-acyltransferase 3
MOSPD2 motile sperm domain containing 2
MT1F metallothionein 1F
MTMR10 myotubularin related protein 10
MTURN maturin, neural progenitor differentiation regulator homolog (Xenopus)
MTUS1 microtubule associated tumor suppressor 1
MVB12B multivesicular body subunit 12B
MYH15 myosin, heavy chain 15
MYO1D myosin ID
MYRF myelin regulatory factor
NFYB nuclear transcription factor Y, beta
NINJ2 ninjurin 2
NIPAL4 NIPA-like domain containing 4
NKAIN2 Na+/K+ transporting ATPase interacting 2
NPC1 Niemann-Pick disease, type C1
NPY2R neuropeptide Y receptor Y2
NRBP2 nuclear receptor binding protein 2
NRIP2 nuclear receptor interacting protein 2
NT5DC1 5'-nucleotidase domain containing 1
NTSR2 neurotensin receptor 2
NXPE3 neurexophilin and PC-esterase domain family, member 3
OLFM4 olfactomedin 4
OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA
OPALIN oligodendrocytic myelin paranodal and inner loop protein
OR10A5 olfactory receptor, family 10, subfamily A, member 5
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR1J4 olfactory receptor, family 1, subfamily J, member 4
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR2M1P olfactory receptor, family 2, subfamily M, member 1 pseudogene
OR4C46 olfactory receptor, family 4, subfamily C, member 46
OR4D11 olfactory receptor, family 4, subfamily D, member 11
OR4K14 olfactory receptor, family 4, subfamily K, member 14
OR51B2 olfactory receptor, family 51, subfamily B, member 2 (gene/pseudogene)
OR51Q1 olfactory receptor, family 51, subfamily Q, member 1 (gene/pseudogene)
OR52B6 olfactory receptor, family 52, subfamily B, member 6
OR52W1 olfactory receptor, family 52, subfamily W, member 1
OR6Q1 olfactory receptor, family 6, subfamily Q, member 1 (gene/pseudogene)
OR7A5 olfactory receptor, family 7, subfamily A, member 5
OR9A2 olfactory receptor, family 9, subfamily A, member 2
OTUD7B OTU deubiquitinase 7B
PAIP2B poly(A) binding protein interacting protein 2B
PAQR6 progestin and adipoQ receptor family member VI
PAQR8 progestin and adipoQ receptor family member VIII
PCDHA12 protocadherin alpha 12
PDE11A phosphodiesterase 11A
PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa
PDK4 pyruvate dehydrogenase kinase, isozyme 4
PEX5L peroxisomal biogenesis factor 5-like
PHYHD1 phytanoyl-CoA dioxygenase domain containing 1
PIEZO2 piezo-type mechanosensitive ion channel component 2
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PKD1L2 polycystic kidney disease 1-like 2 (gene/pseudogene)
PKP4 plakophilin 4
PLA2G16 phospholipase A2, group XVI
PLCL1 phospholipase C-like 1
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1
PLD1 phospholipase D1, phosphatidylcholine-specific
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
PLP1 proteolipid protein 1
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
PMP22 peripheral myelin protein 22
PON1 paraoxonase 1
PON3 paraoxonase 3
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A
PPP2R1B protein phosphatase 2, regulatory subunit A, beta
PRAMEF4 PRAME family member 4
PRCD progressive rod-cone degeneration
PRH1 proline-rich protein HaeIII subfamily 1
PRLHR prolactin releasing hormone receptor
PROP1 PROP paired-like homeobox 1
PRR18 proline rich 18
PRR23A proline rich 23A
PRR30 proline rich 30
PRRG1 proline rich Gla (G-carboxyglutamic acid) 1
PRSS41 protease, serine, 41
PSEN1 presenilin 1
PTCHD3 patched domain containing 3
PTF1A pancreas specific transcription factor, 1a
PTGR2 prostaglandin reductase 2
PTPDC1 protein tyrosine phosphatase domain containing 1
PTPRH protein tyrosine phosphatase, receptor type, H
PWRN2 Prader-Willi region non-protein coding RNA 2
PXK PX domain containing serine/threonine kinase
RAB6C RAB6C, member RAS oncogene family
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated)
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
RGL3 ral guanine nucleotide dissociation stimulator-like 3
RHBDL2 rhomboid, veinlet-like 2 (Drosophila)
RHOB ras homolog family member B
RHOU ras homolog family member U
RMND5B required for meiotic nuclear division 5 homolog B (S. cerevisiae)
RNF113B ring finger protein 113B
RNF13 ring finger protein 13
RNF151 ring finger protein 151
ROGDI rogdi homolog (Drosophila)
RPS10P7 ribosomal protein S10 pseudogene 7
RTP2 receptor (chemosensory) transporter protein 2
RUFY2 RUN and FYVE domain containing 2
RYBP RING1 and YY1 binding protein
S1PR5 sphingosine-1-phosphate receptor 5
SAP18 Sin3A-associated protein, 18kDa
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SDPR serum deprivation response
SDS serine dehydratase
SEC14L5 SEC14-like 5 (S. cerevisiae)
SECISBP2L SECIS binding protein 2-like
SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
SEPP1 selenoprotein P, plasma, 1
SEPT4 septin 4
SEPT8 septin 8
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2
SERTAD4-AS1 SERTAD4 antisense RNA 1
SESN1 sestrin 1
SFRP2 secreted frizzled-related protein 2
SFT2D1 SFT2 domain containing 1
SGK2 serum/glucocorticoid regulated kinase 2
SH3TC2 SH3 domain and tetratricopeptide repeats 2
SHROOM4 shroom family member 4
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SLC22A15 solute carrier family 22, member 15
SLC2A7 solute carrier family 2 (facilitated glucose transporter), member 7
SLC31A2 solute carrier family 31 (copper transporter), member 2
SLC45A3 solute carrier family 45, member 3
SLC48A1 solute carrier family 48 (heme transporter), member 1
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SLCO1A2 solute carrier organic anion transporter family, member 1A2
SMIM8 small integral membrane protein 8
SNX30 sorting nexin family member 30
SPOCK3 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
SPTLC2 serine palmitoyltransferase, long chain base subunit 2
SRCIN1 SRC kinase signaling inhibitor 1
SREBF1 sterol regulatory element binding transcription factor 1
SRSF5 serine/arginine-rich splicing factor 5
SSX5 synovial sarcoma, X breakpoint 5
ST18 suppression of tumorigenicity 18, zinc finger
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
STH saitohin
STX19 syntaxin 19
SVIP small VCP/p97-interacting protein
SYNJ2 synaptojanin 2
TARSL2 threonyl-tRNA synthetase-like 2
TAS2R13 taste receptor, type 2, member 13
TBC1D12 TBC1 domain family, member 12
TESK2 testis-specific kinase 2
TEX13B testis expressed 13B
TF transferrin
THSD1P1 thrombospondin, type I, domain containing 1 pseudogene 1
TIGIT T cell immunoreceptor with Ig and ITIM domains
TMC7 transmembrane channel-like 7
TMEM125 transmembrane protein 125
TMEM139 transmembrane protein 139
TMEM144 transmembrane protein 144
TMEM216 transmembrane protein 216
TMEM63A transmembrane protein 63A
TMEM8C transmembrane protein 8C
TMEM98 transmembrane protein 98
TOB1 transducer of ERBB2, 1
TP53INP2 tumor protein p53 inducible nuclear protein 2
TP53TG5 TP53 target 5
TPPP2 tubulin polymerization-promoting protein family member 2
TRAK2 trafficking protein, kinesin binding 2
TRIM41 tripartite motif containing 41
TRIM59 tripartite motif containing 59
TRIM66 tripartite motif containing 66
TRPM6 transient receptor potential cation channel, subfamily M, member 6
TRPV5 transient receptor potential cation channel, subfamily V, member 5
TSLP thymic stromal lymphopoietin
TTLL11 tubulin tyrosine ligase-like family member 11
TTLL4 tubulin tyrosine ligase-like family member 4
TTLL7 tubulin tyrosine ligase-like family member 7
TTN titin
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
TULP4 tubby like protein 4
TXLNB taxilin beta
UFL1 UFM1-specific ligase 1
UGT1A3 UDP glucuronosyltransferase 1 family, polypeptide A3
UGT8 UDP glycosyltransferase 8
UNC5C unc-5 homolog C (C. elegans)
USH1C Usher syndrome 1C (autosomal recessive, severe)
USP31 ubiquitin specific peptidase 31
WHAMMP2 WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2
WIPF1 WAS/WASL interacting protein family, member 1
XRRA1 X-ray radiation resistance associated 1
ZC2HC1B zinc finger, C2HC-type containing 1B
ZDHHC20 zinc finger, DHHC-type containing 20
ZFP57 ZFP57 zinc finger protein
ZNF514 zinc finger protein 514
ZNF536 zinc finger protein 536
ZNF652 zinc finger protein 652
ZNF705D zinc finger protein 705D

low expression

Symbol Name
CXORF56 chromosome X open reading frame 56