Brain Lower Grade Glioma_LGG_TCGA-FG-6690-01A-11R-1896-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

268 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-FG-6690-01A-11R-1896-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACKR3 atypical chemokine receptor 3
ACSM5 acyl-CoA synthetase medium-chain family member 5
ACTL9 actin-like 9
ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif, 8
ADCYAP1R1 adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
ADGRB1 adhesion G protein-coupled receptor B1
ADGRF2 adhesion G protein-coupled receptor F2
ADI1 acireductone dioxygenase 1
AHCTF1 AT hook containing transcription factor 1
AHCYL2 adenosylhomocysteinase-like 2
AK8 adenylate kinase 8
AMOT angiomotin
AMOTL1 angiomotin like 1
ANGPTL3 angiopoietin-like 3
ANKIB1 ankyrin repeat and IBR domain containing 1
AP2B1 adaptor-related protein complex 2, beta 1 subunit
APPL2 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
ARHGAP31 Rho GTPase activating protein 31
ARHGAP6 Rho GTPase activating protein 6
ARNT2 aryl-hydrocarbon receptor nuclear translocator 2
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ASB3 ankyrin repeat and SOCS box containing 3
ASXL2 additional sex combs like transcriptional regulator 2
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
BCL2L11 BCL2-like 11 (apoptosis facilitator)
C10ORF120 chromosome 10 open reading frame 120
C11ORF54 chromosome 11 open reading frame 54
C2ORF42 chromosome 2 open reading frame 42
C3P1 complement component 3 precursor pseudogene
C7ORF60 chromosome 7 open reading frame 60
CADM1 cell adhesion molecule 1
CARD18 caspase recruitment domain family, member 18
CCDC160 coiled-coil domain containing 160
CCDC163P coiled-coil domain containing 163, pseudogene
CD38 CD38 molecule
CDK15 cyclin-dependent kinase 15
CELF2 CUGBP, Elav-like family member 2
CEP128 centrosomal protein 128kDa
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
CLASP1 cytoplasmic linker associated protein 1
CLDN6 claudin 6
CLEC16A C-type lectin domain family 16, member A
CNTN4 contactin 4
CNTN6 contactin 6
COLCA1 colorectal cancer associated 1
CTNNBIP1 catenin, beta interacting protein 1
DAAM2 dishevelled associated activator of morphogenesis 2
DEFB132 defensin, beta 132
DGKI diacylglycerol kinase, iota
DISP1 dispatched homolog 1 (Drosophila)
DNMBP-AS1 DNMBP antisense RNA 1
EBF1 early B-cell factor 1
EDAR ectodysplasin A receptor
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3
EEF2K eukaryotic elongation factor 2 kinase
ENOX2 ecto-NOX disulfide-thiol exchanger 2
ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
EYA1 EYA transcriptional coactivator and phosphatase 1
EYS eyes shut homolog (Drosophila)
F8 coagulation factor VIII, procoagulant component
FAM120C family with sequence similarity 120C
FAM133A family with sequence similarity 133, member A
FAM196B family with sequence similarity 196, member B
FAM212B family with sequence similarity 212, member B
FAM213A family with sequence similarity 213, member A
FAM69A family with sequence similarity 69, member A
FBXO42 F-box protein 42
FLJ41941 uncharacterized LOC100192420
FLNB filamin B, beta
FMNL3 formin-like 3
FOXO1 forkhead box O1
FOXO3 forkhead box O3
FOXO3B forkhead box O3B pseudogene
FSD1L fibronectin type III and SPRY domain containing 1-like
FSTL5 follistatin-like 5
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2
GATS GATS, stromal antigen 3 opposite strand
GATSL3 GATS protein-like 3
GBP7 guanylate binding protein 7
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene
GH1 growth hormone 1
GINS3 GINS complex subunit 3 (Psf3 homolog)
GLIS1 GLIS family zinc finger 1
GOLPH3 golgi phosphoprotein 3 (coat-protein)
GPR137B G protein-coupled receptor 137B
GPR161 G protein-coupled receptor 161
GPR75 G protein-coupled receptor 75
GPR88 G protein-coupled receptor 88
GREB1L growth regulation by estrogen in breast cancer-like
HECA headcase homolog (Drosophila)
HPR haptoglobin-related protein
HPSE2 heparanase 2 (inactive)
IBA57 IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)
IGSF3 immunoglobulin superfamily, member 3
IKZF5 IKAROS family zinc finger 5 (Pegasus)
IPO11 importin 11
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3
KDM7A lysine (K)-specific demethylase 7A
KIAA1147 KIAA1147
KIAA1211 KIAA1211
KLHL36 kelch-like family member 36
KLHL5 kelch-like family member 5
LDLRAD4 low density lipoprotein receptor class A domain containing 4
LHFPL1 lipoma HMGIC fusion partner-like 1
LIFR leukemia inhibitory factor receptor alpha
LINC00238 long intergenic non-protein coding RNA 238
LIX1 Lix1 homolog (chicken)
LMNTD1 lamin tail domain containing 1
LOC154449 uncharacterized LOC154449
LOC284798 uncharacterized LOC284798
LOC728024 chromosome X open reading frame 56 pseudogene
LPIN1 lipin 1
LPL lipoprotein lipase
LURAP1L leucine rich adaptor protein 1-like
LUZP2 leucine zipper protein 2
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3
MARVELD3 MARVEL domain containing 3
MBD3L2 methyl-CpG binding domain protein 3-like 2
MBD3L5 methyl-CpG binding domain protein 3-like 5
METTL21C methyltransferase like 21C
MGAT4C MGAT4 family, member C
MIA2 melanoma inhibitory activity 2
MID1 midline 1
MME membrane metallo-endopeptidase
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MTMR7 myotubularin related protein 7
N4BP2L1 NEDD4 binding protein 2-like 1
NBN nibrin
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NPEPPS aminopeptidase puromycin sensitive
NRDE2 NRDE-2, necessary for RNA interference, domain containing
NT5DC3 5'-nucleotidase domain containing 3
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
NTSR2 neurotensin receptor 2
NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 11
OGFRL1 opioid growth factor receptor-like 1
OR1B1 olfactory receptor, family 1, subfamily B, member 1 (gene/pseudogene)
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene)
OR3A4P olfactory receptor, family 3, subfamily A, member 4 pseudogene
OR4K1 olfactory receptor, family 4, subfamily K, member 1
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR4X1 olfactory receptor, family 4, subfamily X, member 1 (gene/pseudogene)
OR52A4P olfactory receptor, family 52, subfamily A, member 4, pseudogene
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR52E2 olfactory receptor, family 52, subfamily E, member 2
OR6X1 olfactory receptor, family 6, subfamily X, member 1
OR7E91P olfactory receptor, family 7, subfamily E, member 91 pseudogene
OR7G3 olfactory receptor, family 7, subfamily G, member 3
OSBPL11 oxysterol binding protein-like 11
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2
PAX6 paired box 6
PCDHA9 protocadherin alpha 9
PCDHB17P protocadherin beta 17 pseudogene
PCDHGB2 protocadherin gamma subfamily B, 2
PCSK6 proprotein convertase subtilisin/kexin type 6
PDE8B phosphodiesterase 8B
PDK4 pyruvate dehydrogenase kinase, isozyme 4
PDLIM5 PDZ and LIM domain 5
PER1 period circadian clock 1
PER3 period circadian clock 3
PHYHD1 phytanoyl-CoA dioxygenase domain containing 1
PIAS1 protein inhibitor of activated STAT, 1
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PNPLA8 patatin-like phospholipase domain containing 8
POU3F4 POU class 3 homeobox 4
PPARA peroxisome proliferator-activated receptor alpha
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma
PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae)
PRDM11 PR domain containing 11
PRKD3 protein kinase D3
PROX1 prospero homeobox 1
PRRG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
PTEN phosphatase and tensin homolog
RAB20 RAB20, member RAS oncogene family
RAB4A RAB4A, member RAS oncogene family
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RASA4 RAS p21 protein activator 4
RBMS3 RNA binding motif, single stranded interacting protein 3
REPS1 RALBP1 associated Eps domain containing 1
RFX7 regulatory factor X, 7
RGAG1 retrotransposon gag domain containing 1
RGL1 ral guanine nucleotide dissociation stimulator-like 1
RHOB ras homolog family member B
RHOBTB3 Rho-related BTB domain containing 3
RNF150 ring finger protein 150
RNF180 ring finger protein 180
RSBN1 round spermatid basic protein 1
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
SESN1 sestrin 1
SGK1 serum/glucocorticoid regulated kinase 1
SH3PXD2B SH3 and PX domains 2B
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLC26A5 solute carrier family 26 (anion exchanger), member 5
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
SLITRK3 SLIT and NTRK-like family, member 3
SMAD7 SMAD family member 7
SMAD9 SMAD family member 9
SNIP1 Smad nuclear interacting protein 1
SNN stannin
SNORA75 small nucleolar RNA, H/ACA box 75
SNX29 sorting nexin 29
SOX5 SRY (sex determining region Y)-box 5
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)
SPHKAP SPHK1 interactor, AKAP domain containing
SPIRE1 spire-type actin nucleation factor 1
SPON1 spondin 1, extracellular matrix protein
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SSTR2 somatostatin receptor 2
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
STK17B serine/threonine kinase 17b
STK38L serine/threonine kinase 38 like
STOM stomatin
STOX1 storkhead box 1
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
TAT tyrosine aminotransferase
TBC1D2B TBC1 domain family, member 2B
TBPL1 TBP-like 1
TECTB tectorin beta
TEX30 testis expressed 30
TEX9 testis expressed 9
THUMPD1 THUMP domain containing 1
TIGD2 tigger transposable element derived 2
TIPARP TCDD-inducible poly(ADP-ribose) polymerase
TLR4 toll-like receptor 4
TMC1 transmembrane channel-like 1
TMEM100 transmembrane protein 100
TMEM236 transmembrane protein 236
TRIM33 tripartite motif containing 33
TSC22D1 TSC22 domain family, member 1
TSPAN11 tetraspanin 11
UBAP2 ubiquitin associated protein 2
UCMA upper zone of growth plate and cartilage matrix associated
USH1C Usher syndrome 1C (autosomal recessive, severe)
USP17L6P ubiquitin specific peptidase 17-like family member 6, pseudogene
USP3 ubiquitin specific peptidase 3
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
WDFY3-AS2 WDFY3 antisense RNA 2
WDR20 WD repeat domain 20
WNT3 wingless-type MMTV integration site family, member 3
WNT9B wingless-type MMTV integration site family, member 9B
ZBED3 zinc finger, BED-type containing 3
ZBTB16 zinc finger and BTB domain containing 16
ZBTB20 zinc finger and BTB domain containing 20
ZBTB8A zinc finger and BTB domain containing 8A
ZC3H12C zinc finger CCCH-type containing 12C
ZDHHC3 zinc finger, DHHC-type containing 3
ZNF148 zinc finger protein 148
ZNF189 zinc finger protein 189
ZNF641 zinc finger protein 641
ZNF703 zinc finger protein 703
ZNRF3 zinc and ring finger 3
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1
ZSWIM6 zinc finger, SWIM-type containing 6

low expression

Symbol Name
FAM127B family with sequence similarity 127, member B
IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
NUTM2A NUT family member 2A
NUTM2D NUT family member 2D
SIRT5 sirtuin 5
SMIM15 small integral membrane protein 15