Brain Lower Grade Glioma_LGG_TCGA-FG-5962-01B-11R-1896-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

235 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-FG-5962-01B-11R-1896-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ACTL9 actin-like 9
ADRA1A adrenoceptor alpha 1A
AFF3 AF4/FMR2 family, member 3
ANK1 ankyrin 1, erythrocytic
APOF apolipoprotein F
AQP6 aquaporin 6, kidney specific
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
BCYRN1 brain cytoplasmic RNA 1
BHLHB9 basic helix-loop-helix domain containing, class B, 9
BOLL boule-like RNA-binding protein
BTBD18 BTB (POZ) domain containing 18
C10ORF95 chromosome 10 open reading frame 95
C11ORF71 chromosome 11 open reading frame 71
C16ORF82 chromosome 16 open reading frame 82
C17ORF50 chromosome 17 open reading frame 50
C1ORF177 chromosome 1 open reading frame 177
C3P1 complement component 3 precursor pseudogene
C8ORF46 chromosome 8 open reading frame 46
C9ORF106 chromosome 9 open reading frame 106
C9ORF163 chromosome 9 open reading frame 163
CAGE1 cancer antigen 1
CBLN1 cerebellin 1 precursor
CCDC185 coiled-coil domain containing 185
CCDC38 coiled-coil domain containing 38
CD300LG CD300 molecule-like family member g
CDH12 cadherin 12, type 2 (N-cadherin 2)
CHRNA2 cholinergic receptor, nicotinic, alpha 2 (neuronal)
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal)
CIB4 calcium and integrin binding family member 4
CIT citron rho-interacting serine/threonine kinase
CLEC3A C-type lectin domain family 3, member A
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin
CLVS1 clavesin 1
CNTNAP5 contactin associated protein-like 5
COL17A1 collagen, type XVII, alpha 1
COL18A1-AS1 COL18A1 antisense RNA 1
CPA5 carboxypeptidase A5
CRHR2 corticotropin releasing hormone receptor 2
CSPG4P2Y chondroitin sulfate proteoglycan 4 pseudogene 2, Y-linked
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
CYP2A7 cytochrome P450, family 2, subfamily A, polypeptide 7
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7
DCAF8L2 DDB1 and CUL4 associated factor 8-like 2
DGKK diacylglycerol kinase, kappa
DKFZP434H168 uncharacterized LOC26077
DMRTC1 DMRT-like family C1
DZIP3 DAZ interacting zinc finger protein 3
EDA2R ectodysplasin A2 receptor
ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3
EPB41L1 erythrocyte membrane protein band 4.1-like 1
EPM2AIP1 EPM2A (laforin) interacting protein 1
EPN3 epsin 3
ESRRG estrogen-related receptor gamma
FAM161B family with sequence similarity 161, member B
FAM221B family with sequence similarity 221, member B
FAM47A family with sequence similarity 47, member A
FAM83C family with sequence similarity 83, member C
FBXL22 F-box and leucine-rich repeat protein 22
FCRLB Fc receptor-like B
FKBP6 FK506 binding protein 6, 36kDa
FLJ30679 uncharacterized protein FLJ30679
FLJ37201 tigger transposable element derived 2 pseudogene
FLJ45079 FLJ45079 protein
FMO6P flavin containing monooxygenase 6 pseudogene
FMR1-AS1 FMR1 antisense RNA 1
FRMPD1 FERM and PDZ domain containing 1
FTO fat mass and obesity associated
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1
GDAP1 ganglioside induced differentiation associated protein 1
GLT6D1 glycosyltransferase 6 domain containing 1
GNB5 guanine nucleotide binding protein (G protein), beta 5
GPR119 G protein-coupled receptor 119
GPR179 G protein-coupled receptor 179
GPR75 G protein-coupled receptor 75
GRIK1-AS1 GRIK1 antisense RNA 1
GUCY1A2 guanylate cyclase 1, soluble, alpha 2
HAR1A highly accelerated region 1A (non-protein coding)
HAR1B highly accelerated region 1B (non-protein coding)
HEXA-AS1 HEXA antisense RNA 1
HIGD2B HIG1 hypoxia inducible domain family, member 2B
HIST1H2AK histone cluster 1, H2ak
HIST3H2BB histone cluster 3, H2bb
HRH3 histamine receptor H3
HS6ST2 heparan sulfate 6-O-sulfotransferase 2
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
IFNL3 interferon, lambda 3
IL25 interleukin 25
INA internexin neuronal intermediate filament protein, alpha
INPP5F inositol polyphosphate-5-phosphatase F
IQSEC3 IQ motif and Sec7 domain 3
KCNA3 potassium channel, voltage gated shaker related subfamily A, member 3
KCNC1 potassium channel, voltage gated Shaw related subfamily C, member 1
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1
KCNH6 potassium channel, voltage gated eag related subfamily H, member 6
KIF3B kinesin family member 3B
KRTAP10-12 keratin associated protein 10-12
KRTAP5-2 keratin associated protein 5-2
KRTAP5-3 keratin associated protein 5-3
KSR2 kinase suppressor of ras 2
LACE1 lactation elevated 1
LINC00115 long intergenic non-protein coding RNA 115
LINC00167 long intergenic non-protein coding RNA 167
LINC00469 long intergenic non-protein coding RNA 469
LINC01011 long intergenic non-protein coding RNA 1011
LINC01465 long intergenic non-protein coding RNA 1465
LINC01600 long intergenic non-protein coding RNA 1600
LMOD3 leiomodin 3 (fetal)
LOC100270746 uncharacterized LOC100270746
LOC100270804 uncharacterized LOC100270804
LOC100272217 uncharacterized LOC100272217
LOC285692 uncharacterized LOC285692
LOC727896 cysteine and histidine-rich domain (CHORD) containing 1 pseudogene
LOC728323 uncharacterized LOC728323
LPAR3 lysophosphatidic acid receptor 3
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene
LRRC74A leucine rich repeat containing 74A
MAGEE2 melanoma antigen family E2
MAOA monoamine oxidase A
MCF2 MCF.2 cell line derived transforming sequence
MCF2L2 MCF.2 cell line derived transforming sequence-like 2
MED12L mediator complex subunit 12-like
MGAM maltase-glucoamylase
MIA3 melanoma inhibitory activity family, member 3
MIR99AHG mir-99a-let-7c cluster host gene
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
MTMR9 myotubularin related protein 9
MYH7 myosin, heavy chain 7, cardiac muscle, beta
NAP1L3 nucleosome assembly protein 1-like 3
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NEFH neurofilament, heavy polypeptide
NELL1 NEL-like 1 (chicken)
NME9 NME/NM23 family member 9
NOMO2 NODAL modulator 2
NOX3 NADPH oxidase 3
NPFFR1 neuropeptide FF receptor 1
NTPCR nucleoside-triphosphatase, cancer-related
NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17
NUP210L nucleoporin 210kDa-like
ODF4 outer dense fiber of sperm tails 4
OR10G3 olfactory receptor, family 10, subfamily G, member 3
OR10G4 olfactory receptor, family 10, subfamily G, member 4
OR10H1 olfactory receptor, family 10, subfamily H, member 1
OR10H5 olfactory receptor, family 10, subfamily H, member 5
OR13F1 olfactory receptor, family 13, subfamily F, member 1
OR14A16 olfactory receptor, family 14, subfamily A, member 16
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2AT4 olfactory receptor, family 2, subfamily AT, member 4
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR4D11 olfactory receptor, family 4, subfamily D, member 11
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
PAK3 p21 protein (Cdc42/Rac)-activated kinase 3
PATE2 prostate and testis expressed 2
PCBP3 poly(rC) binding protein 3
PCDHA11 protocadherin alpha 11
PCDHB17P protocadherin beta 17 pseudogene
PCDHB6 protocadherin beta 6
PCF11 PCF11 cleavage and polyadenylation factor subunit
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble)
PCP4L1 Purkinje cell protein 4 like 1
PELI3 pellino E3 ubiquitin protein ligase family member 3
PJA1 praja ring finger 1, E3 ubiquitin protein ligase
PLGLA plasminogen-like A (pseudogene)
PNMA2 paraneoplastic Ma antigen 2
PPAN-P2RY11 PPAN-P2RY11 readthrough
PPP1R27 protein phosphatase 1, regulatory subunit 27
PSKH2 protein serine kinase H2
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2
PVALB parvalbumin
RAB39B RAB39B, member RAS oncogene family
RABGAP1L RAB GTPase activating protein 1-like
RASD2 RASD family, member 2
RAX2 retina and anterior neural fold homeobox 2
RFPL1S RFPL1 antisense RNA 1
RGS21 regulator of G-protein signaling 21
RIMKLA ribosomal modification protein rimK-like family member A
RNASE13 ribonuclease, RNase A family, 13 (non-active)
ROPN1 rhophilin associated tail protein 1
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
SAMD5 sterile alpha motif domain containing 5
SAMD7 sterile alpha motif domain containing 7
SCN9A sodium channel, voltage gated, type IX alpha subunit
SEPT3 septin 3
SHISA6 shisa family member 6
SLC35G6 solute carrier family 35, member G6
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2
SLC7A14 solute carrier family 7, member 14
SND1-IT1 SND1 intronic transcript 1
SNX27 sorting nexin family member 27
SPATA31E1 SPATA31 subfamily E, member 1
SPDYE3 speedy/RINGO cell cycle regulator family member E3
SPTAN1 spectrin, alpha, non-erythrocytic 1
SRRM4 serine/arginine repetitive matrix 4
SSX3 synovial sarcoma, X breakpoint 3
ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
STS steroid sulfatase (microsomal), isozyme S
STXBP5L syntaxin binding protein 5-like
SYN3 synapsin III
SYNDIG1L synapse differentiation inducing 1-like
SYT16 synaptotagmin XVI
SYT2 synaptotagmin II
TAAR6 trace amine associated receptor 6
TADA2A transcriptional adaptor 2A
TAS2R46 taste receptor, type 2, member 46
TBX10 T-box 10
TCTE3 t-complex-associated-testis-expressed 3
TERF2 telomeric repeat binding factor 2
TEX13B testis expressed 13B
TFDP3 transcription factor Dp family, member 3
TMEM108 transmembrane protein 108
TMEM202 transmembrane protein 202
TMEM63C transmembrane protein 63C
TMPPE transmembrane protein with metallophosphoesterase domain
TMSB4Y thymosin beta 4, Y-linked
TOM1L2 target of myb1-like 2 (chicken)
TOX2 TOX high mobility group box family member 2
TRHR thyrotropin-releasing hormone receptor
TSGA13 testis specific, 13
VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1)
VENTXP7 VENT homeobox pseudogene 7
VN1R10P vomeronasal 1 receptor 10 pseudogene
VSTM5 V-set and transmembrane domain containing 5
VSX2 visual system homeobox 2
WDR64 WD repeat domain 64
ZBTB32 zinc finger and BTB domain containing 32
ZMAT4 zinc finger, matrin-type 4
ZNF252P-AS1 ZNF252P antisense RNA 1
ZNF280B zinc finger protein 280B
ZNF658 zinc finger protein 658
ZNF705A zinc finger protein 705A

low expression

Symbol Name
MED28 mediator complex subunit 28
PAN3 PAN3 poly(A) specific ribonuclease subunit