Brain Lower Grade Glioma_LGG_TCGA-F6-A8O4-01A-11R-A36H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

211 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-F6-A8O4-01A-11R-A36H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACVR1C activin A receptor, type IC
ACYP1 acylphosphatase 1, erythrocyte (common) type
ADAM7 ADAM metallopeptidase domain 7
ADCY2 adenylate cyclase 2 (brain)
ADK adenosine kinase
AGBL3 ATP/GTP binding protein-like 3
AK9 adenylate kinase 9
AMZ2 archaelysin family metallopeptidase 2
AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1
ANXA8L1 annexin A8-like 1
AP1M2 adaptor-related protein complex 1, mu 2 subunit
AQP7P1 aquaporin 7 pseudogene 1
AQP7P3 aquaporin 7 pseudogene 3
ASAP1-IT1 ASAP1 intronic transcript 1
ASPRV1 aspartic peptidase, retroviral-like 1
ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1
ATXN3L ataxin 3-like
AXDND1 axonemal dynein light chain domain containing 1
B3GAT2 beta-1,3-glucuronyltransferase 2
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
C10ORF35 chromosome 10 open reading frame 35
C11ORF53 chromosome 11 open reading frame 53
C15ORF40 chromosome 15 open reading frame 40
C17ORF67 chromosome 17 open reading frame 67
C7ORF61 chromosome 7 open reading frame 61
CASP9 caspase 9, apoptosis-related cysteine peptidase
CBWD5 COBW domain containing 5
CCBE1 collagen and calcium binding EGF domains 1
CCDC13 coiled-coil domain containing 13
CCDC170 coiled-coil domain containing 170
CCL16 chemokine (C-C motif) ligand 16
CDH15 cadherin 15, type 1, M-cadherin (myotubule)
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CEP19 centrosomal protein 19kDa
CFAP46 cilia and flagella associated protein 46
CFC1B cripto, FRL-1, cryptic family 1B
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3
CLRN1-AS1 CLRN1 antisense RNA 1
COLCA1 colorectal cancer associated 1
COPRS coordinator of PRMT5, differentiation stimulator
CRYM crystallin, mu
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1
CTSH cathepsin H
DAOA D-amino acid oxidase activator
DCAF7 DDB1 and CUL4 associated factor 7
DDAH1 dimethylarginine dimethylaminohydrolase 1
DEFB119 defensin, beta 119
DEFB132 defensin, beta 132
DLL3 delta-like 3 (Drosophila)
DNAL4 dynein, axonemal, light chain 4
DPY19L2P4 DPY19L2 pseudogene 4
DYNLL2 dynein, light chain, LC8-type 2
EAF2 ELL associated factor 2
EDNRB endothelin receptor type B
EFCAB6 EF-hand calcium binding domain 6
EFNA5 ephrin-A5
EXOC3 exocyst complex component 3
EXOC4 exocyst complex component 4
FAM209B family with sequence similarity 209, member B
FAM227B family with sequence similarity 227, member B
FAM47B family with sequence similarity 47, member B
FAM47E family with sequence similarity 47, member E
FAM8A1 family with sequence similarity 8, member A1
FIG4 FIG4 phosphoinositide 5-phosphatase
FN3KRP fructosamine 3 kinase related protein
FSTL5 follistatin-like 5
FUT9 fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
GALR3 galanin receptor 3
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C
GDF10 growth differentiation factor 10
GDPD1 glycerophosphodiester phosphodiesterase domain containing 1
GP9 glycoprotein IX (platelet)
GPC4 glypican 4
GPHN gephyrin
GREB1L growth regulation by estrogen in breast cancer-like
H3F3B H3 histone, family 3B (H3.3B)
HBBP1 hemoglobin, beta pseudogene 1
HDHD2 haloacid dehalogenase-like hydrolase domain containing 2
HIST1H1A histone cluster 1, H1a
HIST1H4J histone cluster 1, H4j
HPSE2 heparanase 2 (inactive)
HSD17B14 hydroxysteroid (17-beta) dehydrogenase 14
HTATSF1 HIV-1 Tat specific factor 1
IGSF3 immunoglobulin superfamily, member 3
IL17D interleukin 17D
IL17RD interleukin 17 receptor D
IQCF2 IQ motif containing F2
IRX3 iroquois homeobox 3
JADE3 jade family PHD finger 3
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KLK2 kallikrein-related peptidase 2
KLK3 kallikrein-related peptidase 3
KLK4 kallikrein-related peptidase 4
KLKP1 kallikrein pseudogene 1
KRT12 keratin 12, type I
KRTAP10-2 keratin associated protein 10-2
KRTAP5-10 keratin associated protein 5-10
KRTAP5-11 keratin associated protein 5-11
KRTAP5-5 keratin associated protein 5-5
LAMP5 lysosomal-associated membrane protein family, member 5
LCE6A late cornified envelope 6A
LINC00238 long intergenic non-protein coding RNA 238
LINC00244 long intergenic non-protein coding RNA 244
LIX1 Lix1 homolog (chicken)
LOC100130987 uncharacterized LOC100130987
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LOC440040 glutamate receptor, metabotropic 5 pseudogene
LOC440461 Rho GTPase activating protein 27 pseudogene
LOC728554 THO complex 3 pseudogene
LOC728613 programmed cell death 6 pseudogene
LOC729609 uncharacterized LOC729609
LOC91450 uncharacterized LOC91450
MORN2 MORN repeat containing 2
MRGPRX1 MAS-related GPR, member X1
N4BP2L1 NEDD4 binding protein 2-like 1
NAPEPLD N-acyl phosphatidylethanolamine phospholipase D
NBR1 neighbor of BRCA1 gene 1
NBR2 neighbor of BRCA1 gene 2 (non-protein coding)
NDST3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
NOX3 NADPH oxidase 3
NRG3 neuregulin 3
OAZ2 ornithine decarboxylase antizyme 2
OCM2 oncomodulin 2
OR10W1 olfactory receptor, family 10, subfamily W, member 1
OR4N5 olfactory receptor, family 4, subfamily N, member 5
OR4X1 olfactory receptor, family 4, subfamily X, member 1 (gene/pseudogene)
OR4X2 olfactory receptor, family 4, subfamily X, member 2 (gene/pseudogene)
OR51B6 olfactory receptor, family 51, subfamily B, member 6
OR52A4P olfactory receptor, family 52, subfamily A, member 4, pseudogene
OR52E2 olfactory receptor, family 52, subfamily E, member 2
OR8B2 olfactory receptor, family 8, subfamily B, member 2
OR8B3 olfactory receptor, family 8, subfamily B, member 3
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I
PACRG PARK2 co-regulated
PAM peptidylglycine alpha-amidating monooxygenase
PCA3 prostate cancer associated 3 (non-protein coding)
PCDH8 protocadherin 8
PCDHGA3 protocadherin gamma subfamily A, 3
PCNP PEST proteolytic signal containing nuclear protein
PDCD6 programmed cell death 6
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta
PLAC1 placenta-specific 1
PNLDC1 poly(A)-specific ribonuclease (PARN)-like domain containing 1
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PPBPP2 pro-platelet basic protein pseudogene 2
PPIAL4G peptidylprolyl isomerase A (cyclophilin A)-like 4G
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PRB2 proline-rich protein BstNI subfamily 2
PRDM5 PR domain containing 5
PRLHR prolactin releasing hormone receptor
PRPSAP1 phosphoribosyl pyrophosphate synthetase-associated protein 1
PTCH2 patched 2
RABL2B RAB, member of RAS oncogene family-like 2B
RALBP1 ralA binding protein 1
RBMS3 RNA binding motif, single stranded interacting protein 3
RFX2 regulatory factor X, 2 (influences HLA class II expression)
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RNU6ATAC RNA, U6atac small nuclear (U12-dependent splicing)
RPTOR regulatory associated protein of MTOR, complex 1
SCARNA21 small Cajal body-specific RNA 21
SCARNA4 small Cajal body-specific RNA 4
SCGB1D2 secretoglobin, family 1D, member 2
SCN11A sodium channel, voltage gated, type XI alpha subunit
SDHAF3 succinate dehydrogenase complex assembly factor 3
SGK3 serum/glucocorticoid regulated kinase family, member 3
SLC26A11 solute carrier family 26 (anion exchanger), member 11
SLC39A11 solute carrier family 39, member 11
SLC7A13 solute carrier family 7 (anionic amino acid transporter), member 13
SMAP1 small ArfGAP 1
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SNORA1 small nucleolar RNA, H/ACA box 1
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA41 small nucleolar RNA, H/ACA box 41
SNORA49 small nucleolar RNA, H/ACA box 49
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA68 small nucleolar RNA, H/ACA box 68
SNX31 sorting nexin 31
SNX7 sorting nexin 7
SORD sorbitol dehydrogenase
SPDEF SAM pointed domain containing ETS transcription factor
SPERT spermatid associated
SPIN4 spindlin family, member 4
SSBP2 single-stranded DNA binding protein 2
STOM stomatin
SUMO2 small ubiquitin-like modifier 2
SYPL2 synaptophysin-like 2
TBCD tubulin folding cofactor D
TCP10L t-complex 10-like
TMEM254 transmembrane protein 254
TPTE transmembrane phosphatase with tensin homology
TRIM37 tripartite motif containing 37
TSHR thyroid stimulating hormone receptor
TUSC1 tumor suppressor candidate 1
TWSG1 twisted gastrulation BMP signaling modulator 1
UBE2DNL ubiquitin-conjugating enzyme E2D N-terminal like (pseudogene)
UPP2 uridine phosphorylase 2
WDR45B WD repeat domain 45B
WDR86 WD repeat domain 86
WFDC3 WAP four-disulfide core domain 3
WNT3 wingless-type MMTV integration site family, member 3
WNT9B wingless-type MMTV integration site family, member 9B
ZNF804A zinc finger protein 804A
ZPBP zona pellucida binding protein

low expression

Symbol Name
EIF4E2 eukaryotic translation initiation factor 4E family member 2
IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
MRS2 MRS2 magnesium transporter
TOR1A torsin family 1, member A (torsin A)
ZNF799 zinc finger protein 799