Brain Lower Grade Glioma_LGG_TCGA-E1-A7YO-01A-11R-A34F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

357 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-E1-A7YO-01A-11R-A34F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ACOXL acyl-CoA oxidase-like
ACSL5 acyl-CoA synthetase long-chain family member 5
ADAM21 ADAM metallopeptidase domain 21
ADAM21P1 ADAM metallopeptidase domain 21 pseudogene 1
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADGRF5 adhesion G protein-coupled receptor F5
AGAP5 ArfGAP with GTPase domain, ankyrin repeat and PH domain 5
AMT aminomethyltransferase
ANGPT4 angiopoietin 4
ANKAR ankyrin and armadillo repeat containing
ANKRA2 ankyrin repeat, family A (RFXANK-like), 2
APAF1 apoptotic peptidase activating factor 1
APC2 adenomatosis polyposis coli 2
AQP12A aquaporin 12A
AQP12B aquaporin 12B
AQP6 aquaporin 6, kidney specific
ARFGEF3 ARFGEF family member 3
ARL17A ADP-ribosylation factor-like 17A
ARL5C ADP-ribosylation factor-like 5C
ART1 ADP-ribosyltransferase 1
ART5 ADP-ribosyltransferase 5
ASB14 ankyrin repeat and SOCS box containing 14
ASGR1 asialoglycoprotein receptor 1
ASIC4 acid sensing (proton gated) ion channel family member 4
ASPG asparaginase
ATP10A ATPase, class V, type 10A
AVPR2 arginine vasopressin receptor 2
BAALC-AS2 BAALC antisense RNA 2
BMP15 bone morphogenetic protein 15
BMP2 bone morphogenetic protein 2
BMS1P4 BMS1 ribosome biogenesis factor pseudogene 4
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BOLL boule-like RNA-binding protein
BRD1 bromodomain containing 1
BRPF3 bromodomain and PHD finger containing, 3
BTNL9 butyrophilin-like 9
C10ORF113 chromosome 10 open reading frame 113
C14ORF178 chromosome 14 open reading frame 178
C1ORF146 chromosome 1 open reading frame 146
C21ORF62-AS1 C21orf62 antisense RNA 1
C3ORF30 chromosome 3 open reading frame 30
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
CACNA1I calcium channel, voltage-dependent, T type, alpha 1I subunit
CALCOCO1 calcium binding and coiled-coil domain 1
CARF calcium responsive transcription factor
CASC3 cancer susceptibility candidate 3
CASP8AP2 caspase 8 associated protein 2
CATSPER3 cation channel, sperm associated 3
CBWD5 COBW domain containing 5
CCDC42 coiled-coil domain containing 42
CCDC62 coiled-coil domain containing 62
CCDC93 coiled-coil domain containing 93
CCNG2 cyclin G2
CCNI cyclin I
CCT6P1 chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1
CDKL1 cyclin-dependent kinase-like 1 (CDC2-related kinase)
CECR2 cat eye syndrome chromosome region, candidate 2
CELP carboxyl ester lipase pseudogene
CEP295 centrosomal protein 295kDa
CEP68 centrosomal protein 68kDa
CHD9 chromodomain helicase DNA binding protein 9
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CLEC16A C-type lectin domain family 16, member A
CLEC4F C-type lectin domain family 4, member F
CLVS2 clavesin 2
CMKLR1 chemerin chemokine-like receptor 1
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2
CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3
COL17A1 collagen, type XVII, alpha 1
CORO6 coronin 6
CPNE5 copine V
CRACR2A calcium release activated channel regulator 2A
CRAMP1L Crm, cramped-like (Drosophila)
CREB3L4 cAMP responsive element binding protein 3-like 4
CREBBP CREB binding protein
CRIPAK cysteine-rich PAK1 inhibitor
CSDC2 cold shock domain containing C2, RNA binding
CSNK2A2 casein kinase 2, alpha prime polypeptide
CSPG4P2Y chondroitin sulfate proteoglycan 4 pseudogene 2, Y-linked
CST9 cystatin 9 (testatin)
CTC1 CTS telomere maintenance complex component 1
CYCSP52 cytochrome c, somatic pseudogene 52
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYYR1 cysteine/tyrosine-rich 1
D2HGDH D-2-hydroxyglutarate dehydrogenase
DEFB136 defensin, beta 136
DGKG diacylglycerol kinase, gamma 90kDa
DGKK diacylglycerol kinase, kappa
DKFZP434H168 uncharacterized LOC26077
DKFZP434J0226 uncharacterized LOC93429
DNAH1 dynein, axonemal, heavy chain 1
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DPY19L2 dpy-19-like 2 (C. elegans)
DUSP4 dual specificity phosphatase 4
EDA2R ectodysplasin A2 receptor
EFCAB13 EF-hand calcium binding domain 13
EIF4A2 eukaryotic translation initiation factor 4A2
EIF4B eukaryotic translation initiation factor 4B
EPAS1 endothelial PAS domain protein 1
EPC1 enhancer of polycomb homolog 1 (Drosophila)
EPC2 enhancer of polycomb homolog 2 (Drosophila)
EPX eosinophil peroxidase
ESRRG estrogen-related receptor gamma
ETV4 ets variant 4
FAM186A family with sequence similarity 186, member A
FAM201A family with sequence similarity 201, member A
FAM214A family with sequence similarity 214, member A
FAM66E family with sequence similarity 66, member E
FBXL19-AS1 FBXL19 antisense RNA 1 (head to head)
FGF6 fibroblast growth factor 6
FLCN folliculin
FLG2 filaggrin family member 2
FLJ34503 uncharacterized FLJ34503
FLJ42627 uncharacterized LOC645644
FMR1NB fragile X mental retardation 1 neighbor
FNIP1 folliculin interacting protein 1
FOXD4L5 forkhead box D4-like 5
FOXG1 forkhead box G1
FOXN4 forkhead box N4
FOXO3 forkhead box O3
FOXO3B forkhead box O3B pseudogene
FOXP1 forkhead box P1
FTX FTX transcript, XIST regulator (non-protein coding)
GABPB2 GA binding protein transcription factor, beta subunit 2
GAS1 growth arrest-specific 1
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GH2 growth hormone 2
GHDC GH3 domain containing
GID8 GID complex subunit 8
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GLTSCR1L GLTSCR1-like
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
GPD1L glycerol-3-phosphate dehydrogenase 1-like
GPR89B G protein-coupled receptor 89B
GRAMD1B GRAM domain containing 1B
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein
GUCY1A3 guanylate cyclase 1, soluble, alpha 3
HDAC4 histone deacetylase 4
HECTD2 HECT domain containing E3 ubiquitin protein ligase 2
HEXIM1 hexamethylene bis-acetamide inducible 1
HIF3A hypoxia inducible factor 3, alpha subunit
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HRK harakiri, BCL2 interacting protein
HSF4 heat shock transcription factor 4
IBA57 IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
IGDCC4 immunoglobulin superfamily, DCC subclass, member 4
IGFL4 IGF-like family member 4
IGLL3P immunoglobulin lambda-like polypeptide 3, pseudogene
IQCJ IQ motif containing J
ITGA10 integrin, alpha 10
KANSL1 KAT8 regulatory NSL complex subunit 1
KAT7 K(lysine) acetyltransferase 7
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNT2 potassium channel, sodium activated subfamily T, member 2
KDM2B lysine (K)-specific demethylase 2B
KDM4E lysine (K)-specific demethylase 4E
KIAA0087 KIAA0087
KIAA0430 KIAA0430
KIAA0895L KIAA0895-like
KIDINS220 kinase D-interacting substrate, 220kDa
KRT24 keratin 24, type I
KSR1 kinase suppressor of ras 1
LETMD1 LETM1 domain containing 1
LIAS lipoic acid synthetase
LIN54 lin-54 DREAM MuvB core complex component
LINC00176 long intergenic non-protein coding RNA 176
LINC00207 long intergenic non-protein coding RNA 207
LINC00242 long intergenic non-protein coding RNA 242
LINC00574 long intergenic non-protein coding RNA 574
LINC00685 long intergenic non-protein coding RNA 685
LINC01011 long intergenic non-protein coding RNA 1011
LINC01551 long intergenic non-protein coding RNA 1551
LOC100134368 uncharacterized LOC100134368
LOC100268168 uncharacterized LOC100268168
LOC145837
LOC283332 uncharacterized LOC283332
LOC283856 uncharacterized LOC283856
LOC283922 pyruvate dehydrogenase phosphatase regulatory subunit pseudogene
LOC441454 prothymosin, alpha pseudogene
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOC727924 uncharacterized LOC727924
LPAL2 lipoprotein, Lp(a)-like 2, pseudogene
LRP4 low density lipoprotein receptor-related protein 4
LRP5L low density lipoprotein receptor-related protein 5-like
LRRC37A leucine rich repeat containing 37A
LRRC37A2 leucine rich repeat containing 37, member A2
LVRN laeverin
MATN3 matrilin 3
MCPH1 microcephalin 1
MED12 mediator complex subunit 12
MEGF11 multiple EGF-like-domains 11
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
MLLT4-AS1 MLLT4 antisense RNA 1 (head to head)
MME membrane metallo-endopeptidase
MORC3 MORC family CW-type zinc finger 3
MST1 macrophage stimulating 1
MTNR1A melatonin receptor 1A
MYLK2 myosin light chain kinase 2
MYO18B myosin XVIIIB
N4BP2L1 NEDD4 binding protein 2-like 1
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NEUROD4 neuronal differentiation 4
NF1P1 neurofibromin 1 pseudogene 1
NHEG1 neuroblastoma highly expressed 1
NMU neuromedin U
NRG2 neuregulin 2
NUMA1 nuclear mitotic apparatus protein 1
NUPL1 nucleoporin like 1
NXF4 nuclear RNA export factor 4 pseudogene
OR11H4 olfactory receptor, family 11, subfamily H, member 4
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR1L1 olfactory receptor, family 1, subfamily L, member 1
OR1L3 olfactory receptor, family 1, subfamily L, member 3
OR1L4 olfactory receptor, family 1, subfamily L, member 4
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR2S2 olfactory receptor, family 2, subfamily S, member 2 (gene/pseudogene)
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene
PAQR5 progestin and adipoQ receptor family member V
PARP6 poly (ADP-ribose) polymerase family, member 6
PCDHA11 protocadherin alpha 11
PCDHB4 protocadherin beta 4
PCDHGA10 protocadherin gamma subfamily A, 10
PCDHGA5 protocadherin gamma subfamily A, 5
PCDHGB7 protocadherin gamma subfamily B, 7
PCNT pericentrin
PCNX pecanex homolog (Drosophila)
PDPR pyruvate dehydrogenase phosphatase regulatory subunit
PGAP1 post-GPI attachment to proteins 1
PHF7 PHD finger protein 7
PIKFYVE phosphoinositide kinase, FYVE finger containing
PLA2G10 phospholipase A2, group X
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1
PLGLB2 plasminogen-like B2
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1
PMS2CL PMS2 C-terminal like pseudogene
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
POU1F1 POU class 1 homeobox 1
PP2D1 protein phosphatase 2C-like domain containing 1
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2)
PPP1R13B protein phosphatase 1, regulatory subunit 13B
PRCD progressive rod-cone degeneration
PRKY protein kinase, Y-linked, pseudogene
PROCA1 protein interacting with cyclin A1
PROX1 prospero homeobox 1
PRPH peripherin
PRX periaxin
PTX4 pentraxin 4, long
PVRIG poliovirus receptor related immunoglobulin domain containing
R3HDM2 R3H domain containing 2
RAB31 RAB31, member RAS oncogene family
RASA4 RAS p21 protein activator 4
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
RIC3 RIC3 acetylcholine receptor chaperone
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RNASE7 ribonuclease, RNase A family, 7
RPL23AP64 ribosomal protein L23a pseudogene 64
RTP3 receptor (chemosensory) transporter protein 3
RTP5 receptor (chemosensory) transporter protein 5 (putative)
SDHAP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
SEZ6L seizure related 6 homolog (mouse)-like
SF3A1 splicing factor 3a, subunit 1, 120kDa
SH2D6 SH2 domain containing 6
SIRT1 sirtuin 1
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6
SLC19A3 solute carrier family 19 (thiamine transporter), member 3
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16
SLC35D3 solute carrier family 35, member D3
SLC52A3 solute carrier family 52 (riboflavin transporter), member 3
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SLIT1 slit homolog 1 (Drosophila)
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SNHG8 small nucleolar RNA host gene 8
SNORD115-13 small nucleolar RNA, C/D box 115-13
SNORD115-26 small nucleolar RNA, C/D box 115-26
SNX29P2 sorting nexin 29 pseudogene 2
SPDYE5 speedy/RINGO cell cycle regulator family member E5
SPDYE6 speedy/RINGO cell cycle regulator family member E6
SPDYE8P speedy/RINGO cell cycle regulator family member E8, pseudogene
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1
ST6GALNAC1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
STAR steroidogenic acute regulatory protein
SUGT1P1 SUGT1 pseudogene 1
SUGT1P3 SUGT1 pseudogene 3
SUN5 Sad1 and UNC84 domain containing 5
SYCP2 synaptonemal complex protein 2
SYNE2 spectrin repeat containing, nuclear envelope 2
SYNGAP1 synaptic Ras GTPase activating protein 1
TACC2 transforming, acidic coiled-coil containing protein 2
TAPT1 transmembrane anterior posterior transformation 1
TAS2R31 taste receptor, type 2, member 31
TAS2R8 taste receptor, type 2, member 8
TBC1D3P1-DHX40P1 TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
TBC1D4 TBC1 domain family, member 4
TEX36 testis expressed 36
TEX37 testis expressed 37
TLE6 transducin-like enhancer of split 6
TMEM161B transmembrane protein 161B
TMEM175 transmembrane protein 175
TMEM253 transmembrane protein 253
TMEM45B transmembrane protein 45B
TMEM82 transmembrane protein 82
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
TNS1 tensin 1
TPCN1 two pore segment channel 1
TPPP2 tubulin polymerization-promoting protein family member 2
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1
TRIM52 tripartite motif containing 52
TRIM6-TRIM34 TRIM6-TRIM34 readthrough
TRIM62 tripartite motif containing 62
TRIM66 tripartite motif containing 66
TRMT10A tRNA methyltransferase 10 homolog A (S. cerevisiae)
TSC1 tuberous sclerosis 1
TSPAN14 tetraspanin 14
TSPAN32 tetraspanin 32
TSPEAR thrombospondin-type laminin G domain and EAR repeats
TTC14 tetratricopeptide repeat domain 14
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
TUFT1 tuftelin 1
TXNDC16 thioredoxin domain containing 16
UBE3B ubiquitin protein ligase E3B
UCKL1-AS1 UCKL1 antisense RNA 1
UMODL1-AS1 UMODL1 antisense RNA 1
UNC79 unc-79 homolog (C. elegans)
UNKL unkempt family zinc finger-like
VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
WFDC11 WAP four-disulfide core domain 11
WSCD2 WSC domain containing 2
YPEL4 yippee-like 4 (Drosophila)
ZBTB44 zinc finger and BTB domain containing 44
ZC2HC1B zinc finger, C2HC-type containing 1B
ZC3H6 zinc finger CCCH-type containing 6
ZCCHC14 zinc finger, CCHC domain containing 14
ZDHHC22 zinc finger, DHHC-type containing 22
ZNF233 zinc finger protein 233
ZNF263 zinc finger protein 263
ZNF333 zinc finger protein 333
ZNF366 zinc finger protein 366
ZNF674 zinc finger protein 674
ZNF676 zinc finger protein 676
ZNF705D zinc finger protein 705D
ZNF720 zinc finger protein 720
ZNF737 zinc finger protein 737
ZNF763 zinc finger protein 763
ZNF99 zinc finger protein 99
ZXDC ZXD family zinc finger C

low expression

Symbol Name
ASTE1 asteroid homolog 1 (Drosophila)
FEZ2 fasciculation and elongation protein zeta 2 (zygin II)
PPIL1 peptidylprolyl isomerase (cyclophilin)-like 1
SERF1A small EDRK-rich factor 1A (telomeric)
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon