Brain Lower Grade Glioma_LGG_TCGA-E1-5311-01A-01R-1470-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

336 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-E1-5311-01A-01R-1470-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ACO1 aconitase 1, soluble
ACSL5 acyl-CoA synthetase long-chain family member 5
ACSM4 acyl-CoA synthetase medium-chain family member 4
ACTR8 ARP8 actin-related protein 8 homolog (yeast)
ACVR1C activin A receptor, type IC
ACVR2B activin A receptor, type IIB
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5
ADAMTSL2 ADAMTS-like 2
ADGRG1 adhesion G protein-coupled receptor G1
ADIPOR2 adiponectin receptor 2
ADRB3 adrenoceptor beta 3
AFF3 AF4/FMR2 family, member 3
AHCTF1 AT hook containing transcription factor 1
AKAP1 A kinase (PRKA) anchor protein 1
AKAP6 A kinase (PRKA) anchor protein 6
AKT3 v-akt murine thymoma viral oncogene homolog 3
AMER2 APC membrane recruitment protein 2
ANKFY1 ankyrin repeat and FYVE domain containing 1
ARHGAP31 Rho GTPase activating protein 31
ARID1B AT rich interactive domain 1B (SWI1-like)
ARMCX1 armadillo repeat containing, X-linked 1
ARRDC3 arrestin domain containing 3
ASB18 ankyrin repeat and SOCS box containing 18
ASXL2 additional sex combs like transcriptional regulator 2
ATOH8 atonal homolog 8 (Drosophila)
ATP10A ATPase, class V, type 10A
ATP7B ATPase, Cu++ transporting, beta polypeptide
ATP9A ATPase, class II, type 9A
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2
BAGE2 B melanoma antigen family, member 2
BCLAF1 BCL2-associated transcription factor 1
BCYRN1 brain cytoplasmic RNA 1
BFAR bifunctional apoptosis regulator
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRPF3 bromodomain and PHD finger containing, 3
C3ORF30 chromosome 3 open reading frame 30
C6ORF48 chromosome 6 open reading frame 48
CALCOCO1 calcium binding and coiled-coil domain 1
CAMSAP1 calmodulin regulated spectrin-associated protein 1
CBLN1 cerebellin 1 precursor
CBS cystathionine-beta-synthase
CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
CDH18 cadherin 18, type 2
CDH20 cadherin 20, type 2
CDYL2 chromodomain protein, Y-like 2
CEACAM18 carcinoembryonic antigen-related cell adhesion molecule 18
CEP170P1 centrosomal protein 170kDa pseudogene 1
CEP68 centrosomal protein 68kDa
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11
CLEC16A C-type lectin domain family 16, member A
CMKLR1 chemerin chemokine-like receptor 1
CNIH1 cornichon family AMPA receptor auxiliary protein 1
CNTFR ciliary neurotrophic factor receptor
CNTNAP5 contactin associated protein-like 5
CPT1A carnitine palmitoyltransferase 1A (liver)
CREBBP CREB binding protein
CREBRF CREB3 regulatory factor
CSNK1A1L casein kinase 1, alpha 1-like
CSNK2A2 casein kinase 2, alpha prime polypeptide
CYP4B1 cytochrome P450, family 4, subfamily B, polypeptide 1
DCTN4 dynactin 4 (p62)
DGKG diacylglycerol kinase, gamma 90kDa
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DRP2 dystrophin related protein 2
DUSP4 dual specificity phosphatase 4
DYM dymeclin
EDA ectodysplasin A
EDN3 endothelin 3
EEF2 eukaryotic translation elongation factor 2
EIF2A eukaryotic translation initiation factor 2A, 65kDa
EIF3E eukaryotic translation initiation factor 3, subunit E
EIF3L eukaryotic translation initiation factor 3, subunit L
EIF4B eukaryotic translation initiation factor 4B
ENHO energy homeostasis associated
ENOX1 ecto-NOX disulfide-thiol exchanger 1
EPC2 enhancer of polycomb homolog 2 (Drosophila)
EPG5 ectopic P-granules autophagy protein 5 homolog (C. elegans)
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
ETV3L ets variant 3-like
FAM120B family with sequence similarity 120B
FAM155B family with sequence similarity 155, member B
FAM47A family with sequence similarity 47, member A
FAM58BP cyclin-related protein FAM58B
FBXO21 F-box protein 21
FCHSD2 FCH and double SH3 domains 2
FGF6 fibroblast growth factor 6
FLJ44635 TPT1-like protein
FNIP1 folliculin interacting protein 1
FOXN3 forkhead box N3
FOXO3 forkhead box O3
FOXO3B forkhead box O3B pseudogene
FOXP1 forkhead box P1
FUNDC2P2 FUN14 domain containing 2 pseudogene 2
FXYD7 FXYD domain containing ion transport regulator 7
GABARAPL3 GABA(A) receptors associated protein like 3, pseudogene
GATSL2 GATS protein-like 2
GCDH glutaryl-CoA dehydrogenase
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GDF2 growth differentiation factor 2
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GLYATL1 glycine-N-acyltransferase-like 1
GLYATL2 glycine-N-acyltransferase-like 2
GMCL1P1 germ cell-less, spermatogenesis associated 1 pseudogene 1
GPD1L glycerol-3-phosphate dehydrogenase 1-like
GPHN gephyrin
GPR161 G protein-coupled receptor 161
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
GRIP1 glutamate receptor interacting protein 1
GRM8 glutamate receptor, metabotropic 8
GTF2F1 general transcription factor IIF, polypeptide 1, 74kDa
GTPBP8 GTP-binding protein 8 (putative)
H1F0 H1 histone family, member 0
HCRTR1 hypocretin (orexin) receptor 1
HECA headcase homolog (Drosophila)
HIGD1C HIG1 hypoxia inducible domain family, member 1C
HIST3H2A histone cluster 3, H2a
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1
HS6ST2 heparan sulfate 6-O-sulfotransferase 2
IGBP1 immunoglobulin (CD79A) binding protein 1
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
IL11RA interleukin 11 receptor, alpha
IL6ST interleukin 6 signal transducer
IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2
INSR insulin receptor
IPO7 importin 7
IQSEC2 IQ motif and Sec7 domain 2
JARID2 jumonji, AT rich interactive domain 2
JMY junction mediating and regulatory protein, p53 cofactor
KBTBD7 kelch repeat and BTB (POZ) domain containing 7
KCNH7 potassium channel, voltage gated eag related subfamily H, member 7
KCTD3 potassium channel tetramerization domain containing 3
KDM3A lysine (K)-specific demethylase 3A
KIAA0141 KIAA0141
KIAA1161 KIAA1161
KIDINS220 kinase D-interacting substrate, 220kDa
KIF26A kinesin family member 26A
KITLG KIT ligand
KLF12 Kruppel-like factor 12
KLF15 Kruppel-like factor 15
KLHL36 kelch-like family member 36
KMT2A lysine (K)-specific methyltransferase 2A
KRTAP10-4 keratin associated protein 10-4
KRTAP10-6 keratin associated protein 10-6
KRTAP20-1 keratin associated protein 20-1
KRTAP4-1 keratin associated protein 4-1
KRTAP8-1 keratin associated protein 8-1
KTN1-AS1 KTN1 antisense RNA 1
LAMA3 laminin, alpha 3
LINC00589 long intergenic non-protein coding RNA 589
LOC100130331 POTE ankyrin domain family, member F pseudogene
LOC100133050 glucuronidase, beta pseudogene
LOC284441 actin-related protein 2 pseudogene
LOC285768 uncharacterized LOC285768
LOC649330
LRRC8A leucine rich repeat containing 8 family, member A
LRRTM2 leucine rich repeat transmembrane neuronal 2
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1
MARCH11 membrane-associated ring finger (C3HC4) 11
MATN3 matrilin 3
MED13L mediator complex subunit 13-like
MEGF11 multiple EGF-like-domains 11
MID1 midline 1
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
MME membrane metallo-endopeptidase
MRGPRG-AS1 MRGPRG antisense RNA 1
MRPL10 mitochondrial ribosomal protein L10
MRPL30 mitochondrial ribosomal protein L30
MRPL45 mitochondrial ribosomal protein L45
MT4 metallothionein 4
MTA3 metastasis associated 1 family, member 3
MTMR7 myotubularin related protein 7
MTNR1A melatonin receptor 1A
MYO18B myosin XVIIIB
NACA2 nascent polypeptide-associated complex alpha subunit 2
NBAS neuroblastoma amplified sequence
NCOA2 nuclear receptor coactivator 2
NOA1 nitric oxide associated 1
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
NOG noggin
NOMO2 NODAL modulator 2
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae)
OLFM4 olfactomedin 4
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR5B21 olfactory receptor, family 5, subfamily B, member 21
OR6C1 olfactory receptor, family 6, subfamily C, member 1
OR6F1 olfactory receptor, family 6, subfamily F, member 1
PA2G4P4 proliferation-associated 2G4 pseudogene 4
PABPC3 poly(A) binding protein, cytoplasmic 3
PCDH20 protocadherin 20
PCDHA2 protocadherin alpha 2
PCDHA4 protocadherin alpha 4
PCDHB2 protocadherin beta 2
PCDHB9 protocadherin beta 9
PCDHGA10 protocadherin gamma subfamily A, 10
PCDHGB1 protocadherin gamma subfamily B, 1
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2
PDZD2 PDZ domain containing 2
PEG3-AS1 PEG3 antisense RNA 1
PID1 phosphotyrosine interaction domain containing 1
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PIN1P1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive)
PLCL2 phospholipase C-like 2
POTEE POTE ankyrin domain family, member E
POTEF POTE ankyrin domain family, member F
POTEM POTE ankyrin domain family, member M
PPM1E protein phosphatase, Mg2+/Mn2+ dependent, 1E
PRAMEF14 PRAME family member 14
PRAMEF16 PRAME family member 16
PRAMEF19 PRAME family member 19
PRAMEF22 PRAME family member 22
PRICKLE2 prickle homolog 2 (Drosophila)
PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit
PTGDR2 prostaglandin D2 receptor 2
PTGFR prostaglandin F receptor (FP)
PTPRG protein tyrosine phosphatase, receptor type, G
PVRL3 poliovirus receptor-related 3
RAB10 RAB10, member RAS oncogene family
RAB31 RAB31, member RAS oncogene family
RAET1L retinoic acid early transcript 1L
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
RBL2 retinoblastoma-like 2
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
RMND1 required for meiotic nuclear division 1 homolog (S. cerevisiae)
RNF17 ring finger protein 17
RPL13AP6 ribosomal protein L13a pseudogene 6
RPL19P12 ribosomal protein L19 pseudogene 12
RPL21 ribosomal protein L21
RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6
RPUSD4 RNA pseudouridylate synthase domain containing 4
RSF1 remodeling and spacing factor 1
RSL1D1 ribosomal L1 domain containing 1
RXFP3 relaxin/insulin-like family peptide receptor 3
SBF1P1 SET binding factor 1 pseudogene 1
SCARNA18 small Cajal body-specific RNA 18
SCEL sciellin
SF3A1 splicing factor 3a, subunit 1, 120kDa
SFTA1P surfactant associated 1, pseudogene
SH2D3C SH2 domain containing 3C
SH3PXD2A SH3 and PX domains 2A
SHC3 SHC (Src homology 2 domain containing) transforming protein 3
SIK2 salt-inducible kinase 2
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1
SLC52A3 solute carrier family 52 (riboflavin transporter), member 3
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5
SLIT1 slit homolog 1 (Drosophila)
SLITRK1 SLIT and NTRK-like family, member 1
SOGA1 suppressor of glucose, autophagy associated 1
SOGA3 SOGA family member 3
SORCS3 sortilin-related VPS10 domain containing receptor 3
SPANXN4 SPANX family, member N4
SPIN3 spindlin family, member 3
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
ST6GALNAC1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
STK32A serine/threonine kinase 32A
SULT1B1 sulfotransferase family, cytosolic, 1B, member 1
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae)
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
TAF1L TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like
TBC1D10A TBC1 domain family, member 10A
TBC1D21 TBC1 domain family, member 21
TBC1D3P1-DHX40P1 TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
TDRD3 tudor domain containing 3
THG1L tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
TINCR tissue differentiation-inducing non-protein coding RNA
TMEM151B transmembrane protein 151B
TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough
TMEM45B transmembrane protein 45B
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
TNR tenascin R
TOMM70A translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)
TRIM10 tripartite motif containing 10
TRIM32 tripartite motif containing 32
TSC22D1 TSC22 domain family, member 1
TSPY26P testis specific protein, Y-linked 26, pseudogene
TXNDC16 thioredoxin domain containing 16
TXNL1 thioredoxin-like 1
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UNC79 unc-79 homolog (C. elegans)
UQCRC2 ubiquinol-cytochrome c reductase core protein II
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3)
USP27X ubiquitin specific peptidase 27, X-linked
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
UTS2R urotensin 2 receptor
VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
VRTN vertebrae development associated
VSIG10 V-set and immunoglobulin domain containing 10
VWC2L von Willebrand factor C domain containing protein 2-like
WBSCR27 Williams Beuren syndrome chromosome region 27
WDFY1 WD repeat and FYVE domain containing 1
WSCD2 WSC domain containing 2
XKR4 XK, Kell blood group complex subunit-related family, member 4
ZBTB8A zinc finger and BTB domain containing 8A
ZBTB8B zinc finger and BTB domain containing 8B
ZC2HC1B zinc finger, C2HC-type containing 1B
ZC3H8 zinc finger CCCH-type containing 8
ZCCHC7 zinc finger, CCHC domain containing 7
ZMAT3 zinc finger, matrin-type 3
ZNF16 zinc finger protein 16
ZNF19 zinc finger protein 19
ZNF233 zinc finger protein 233
ZNF277 zinc finger protein 277
ZNF391 zinc finger protein 391
ZNF442 zinc finger protein 442
ZNF496 zinc finger protein 496
ZNF57 zinc finger protein 57
ZNF627 zinc finger protein 627
ZNF641 zinc finger protein 641
ZNF658 zinc finger protein 658
ZNF676 zinc finger protein 676
ZNF763 zinc finger protein 763
ZNF843 zinc finger protein 843
ZNF844 zinc finger protein 844
ZUFSP zinc finger with UFM1-specific peptidase domain

low expression

Symbol Name
C15ORF40 chromosome 15 open reading frame 40
CSK c-src tyrosine kinase
FAM103A1 family with sequence similarity 103, member A1
GTF2A2 general transcription factor IIA, 2, 12kDa
IVD isovaleryl-CoA dehydrogenase
MORF4L1 mortality factor 4 like 1
MTFMT mitochondrial methionyl-tRNA formyltransferase
OAZ2 ornithine decarboxylase antizyme 2
PACRGL PARK2 co-regulated-like
SCAND2P SCAN domain containing 2 pseudogene
SLTM SAFB-like, transcription modulator
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome)
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein)
STX18 syntaxin 18
TMEM62 transmembrane protein 62
WDR61 WD repeat domain 61
ZFAND6 zinc finger, AN1-type domain 6