Brain Lower Grade Glioma_LGG_TCGA-E1-5307-01A-01R-1896-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

361 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-E1-5307-01A-01R-1896-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
ABI1 abl-interactor 1
ACKR3 atypical chemokine receptor 3
ACVR2B activin A receptor, type IIB
ADGRF2 adhesion G protein-coupled receptor F2
ADGRL3 adhesion G protein-coupled receptor L3
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide
AFM afamin
AGMO alkylglycerol monooxygenase
AHNAK AHNAK nucleoprotein
AJAP1 adherens junctions associated protein 1
ALCAM activated leukocyte cell adhesion molecule
ALDH6A1 aldehyde dehydrogenase 6 family, member A1
AMIGO1 adhesion molecule with Ig-like domain 1
ANKRD46 ankyrin repeat domain 46
APH1B APH1B gamma secretase subunit
APPL2 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
AR androgen receptor
ARHGAP24 Rho GTPase activating protein 24
ARHGAP35 Rho GTPase activating protein 35
ARHGAP5 Rho GTPase activating protein 5
ARID2 AT rich interactive domain 2 (ARID, RFX-like)
ARNT2 aryl-hydrocarbon receptor nuclear translocator 2
ASAH2B N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B
ASB7 ankyrin repeat and SOCS box containing 7
ATE1 arginyltransferase 1
ATF2 activating transcription factor 2
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
ATP13A4 ATPase type 13A4
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
B3GALT2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
BAG4 BCL2-associated athanogene 4
BCAS3 breast carcinoma amplified sequence 3
BCR breakpoint cluster region
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like
BRF2 BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit
BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3
BROX BRO1 domain and CAAX motif containing
C20ORF202 chromosome 20 open reading frame 202
CABLES1 Cdk5 and Abl enzyme substrate 1
CADM2 cell adhesion molecule 2
CASP9 caspase 9, apoptosis-related cysteine peptidase
CASZ1 castor zinc finger 1
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CDC42SE2 CDC42 small effector 2
CDH10 cadherin 10, type 2 (T2-cadherin)
CELF2 CUGBP, Elav-like family member 2
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CLCN3 chloride channel, voltage-sensitive 3
CLEC9A C-type lectin domain family 9, member A
CLP1 cleavage and polyadenylation factor I subunit 1
CNOT7 CCR4-NOT transcription complex, subunit 7
CNTN3 contactin 3 (plasmacytoma associated)
COA7 cytochrome c oxidase assembly factor 7 (putative)
COG2 component of oligomeric golgi complex 2
CPE carboxypeptidase E
CRADD CASP2 and RIPK1 domain containing adaptor with death domain
CREB1 cAMP responsive element binding protein 1
CREBRF CREB3 regulatory factor
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like)
CRNKL1 crooked neck pre-mRNA splicing factor 1
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1
CSMD3 CUB and Sushi multiple domains 3
CSPG4 chondroitin sulfate proteoglycan 4
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
CT45A4 cancer/testis antigen family 45, member A4
CTH cystathionine gamma-lyase
CWF19L2 CWF19-like 2, cell cycle control (S. pombe)
CXXC4 CXXC finger protein 4
DBT dihydrolipoamide branched chain transacylase E2
DCC DCC netrin 1 receptor
DDB1 damage-specific DNA binding protein 1, 127kDa
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6
DENND4A DENN/MADD domain containing 4A
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila)
DIS3L DIS3 like exosome 3'-5' exoribonuclease
DMRT2 doublesex and mab-3 related transcription factor 2
DNMBP-AS1 DNMBP antisense RNA 1
DPP6 dipeptidyl-peptidase 6
DPPA5 developmental pluripotency associated 5
DPY19L3 dpy-19-like 3 (C. elegans)
DSCAM Down syndrome cell adhesion molecule
DUSP26 dual specificity phosphatase 26 (putative)
EAF2 ELL associated factor 2
EBF1 early B-cell factor 1
EIF3E eukaryotic translation initiation factor 3, subunit E
EIF3H eukaryotic translation initiation factor 3, subunit H
EIF4B eukaryotic translation initiation factor 4B
ELP3 elongator acetyltransferase complex subunit 3
ELP4 elongator acetyltransferase complex subunit 4
ERBB3 erb-b2 receptor tyrosine kinase 3
ERBB4 erb-b2 receptor tyrosine kinase 4
ERCC6 excision repair cross-complementation group 6
ETNPPL ethanolamine-phosphate phospho-lyase
FAM120C family with sequence similarity 120C
FAM13A family with sequence similarity 13, member A
FAM171B family with sequence similarity 171, member B
FAM217B family with sequence similarity 217, member B
FAM84B family with sequence similarity 84, member B
FBXO21 F-box protein 21
FEM1B fem-1 homolog b (C. elegans)
FERMT1 fermitin family member 1
FGF12 fibroblast growth factor 12
FGF6 fibroblast growth factor 6
FIGN fidgetin
FMO5 flavin containing monooxygenase 5
FMO9P flavin containing monooxygenase 9 pseudogene
FNIP2 folliculin interacting protein 2
FOXN2 forkhead box N2
FOXO3B forkhead box O3B pseudogene
FSCB fibrous sheath CABYR binding protein
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
GALNT13 polypeptide N-acetylgalactosaminyltransferase 13
GALNT9 polypeptide N-acetylgalactosaminyltransferase 9
GATSL2 GATS protein-like 2
GLCCI1 glucocorticoid induced 1
GLT6D1 glycosyltransferase 6 domain containing 1
GOLPH3L golgi phosphoprotein 3-like
GPAM glycerol-3-phosphate acyltransferase, mitochondrial
GPR176 G protein-coupled receptor 176
GRIA4 glutamate receptor, ionotropic, AMPA 4
GRID2 glutamate receptor, ionotropic, delta 2
GSG1L GSG1-like
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa
HCRTR2 hypocretin (orexin) receptor 2
HIPK3 homeodomain interacting protein kinase 3
HIST2H4A histone cluster 2, H4a
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11
JARID2 jumonji, AT rich interactive domain 2
KANSL1 KAT8 regulatory NSL complex subunit 1
KANSL1L KAT8 regulatory NSL complex subunit 1-like
KBTBD3 kelch repeat and BTB (POZ) domain containing 3
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2
KCND3 potassium channel, voltage gated Shal related subfamily D, member 3
KCTD20 potassium channel tetramerization domain containing 20
KCTD3 potassium channel tetramerization domain containing 3
KIAA0196 KIAA0196
KIAA1429 KIAA1429
KIAA1671 KIAA1671
KIF19 kinesin family member 19
KLF13 Kruppel-like factor 13
KLHL11 kelch-like family member 11
KLHL23 kelch-like family member 23
KLHL28 kelch-like family member 28
LRBA LPS-responsive vesicle trafficking, beach and anchor containing
LRIG2 leucine-rich repeats and immunoglobulin-like domains 2
LSAMP limbic system-associated membrane protein
MAML2 mastermind-like 2 (Drosophila)
MAN1A2 mannosidase, alpha, class 1A, member 2
MB21D2 Mab-21 domain containing 2
MBD5 methyl-CpG binding domain protein 5
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2
MED13L mediator complex subunit 13-like
MEGF11 multiple EGF-like-domains 11
MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
MKLN1 muskelin 1, intracellular mediator containing kelch motifs
MSL2 male-specific lethal 2 homolog (Drosophila)
NCAM1 neural cell adhesion molecule 1
NCAM2 neural cell adhesion molecule 2
NCK1 NCK adaptor protein 1
NCOA2 nuclear receptor coactivator 2
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
NLGN1 neuroligin 1
NOBOX NOBOX oogenesis homeobox
NPAT nuclear protein, ataxia-telangiectasia locus
NPEPPS aminopeptidase puromycin sensitive
NRCAM neuronal cell adhesion molecule
NSUN3 NOP2/Sun domain family, member 3
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 11
OMG oligodendrocyte myelin glycoprotein
OPHN1 oligophrenin 1
OPRM1 opioid receptor, mu 1
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR52B2 olfactory receptor, family 52, subfamily B, member 2
OR52B4 olfactory receptor, family 52, subfamily B, member 4 (gene/pseudogene)
OR5M3 olfactory receptor, family 5, subfamily M, member 3
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OR8J1 olfactory receptor, family 8, subfamily J, member 1
OR8U1 olfactory receptor, family 8, subfamily U, member 1
OSBP oxysterol binding protein
OTUD4 OTU deubiquitinase 4
PABPC5 poly(A) binding protein, cytoplasmic 5
PAFAH1B2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
PBX1 pre-B-cell leukemia homeobox 1
PCDH10 protocadherin 10
PCDH11X protocadherin 11 X-linked
PCDH7 protocadherin 7
PCDHA3 protocadherin alpha 3
PCDHGB5 protocadherin gamma subfamily B, 5
PEG3-AS1 PEG3 antisense RNA 1
PELI1 pellino E3 ubiquitin protein ligase 1
PELI2 pellino E3 ubiquitin protein ligase family member 2
PHACTR3 phosphatase and actin regulator 3
PHF3 PHD finger protein 3
PIAS1 protein inhibitor of activated STAT, 1
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PIK3R4 phosphoinositide-3-kinase, regulatory subunit 4
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
PLEKHM3 pleckstrin homology domain containing, family M, member 3
POLR3B polymerase (RNA) III (DNA directed) polypeptide B
PPAP2B phosphatidic acid phosphatase type 2B
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit
PRKG2 protein kinase, cGMP-dependent, type II
PRTG protogenin
PTCH1 patched 1
PTPN11 protein tyrosine phosphatase, non-receptor type 11
PUM1 pumilio RNA-binding family member 1
PYGO1 pygopus family PHD finger 1
RAB10 RAB10, member RAS oncogene family
RAB11A RAB11A, member RAS oncogene family
RAB27B RAB27B, member RAS oncogene family
RAB30 RAB30, member RAS oncogene family
RAD21 RAD21 homolog (S. pombe)
RANBP3L RAN binding protein 3-like
RBM12 RNA binding motif protein 12
RC3H2 ring finger and CCCH-type domains 2
RFTN2 raftlin family member 2
RFX7 regulatory factor X, 7
RICTOR RPTOR independent companion of MTOR, complex 2
RIN2 Ras and Rab interactor 2
RIPK4 receptor-interacting serine-threonine kinase 4
RLIM ring finger protein, LIM domain interacting
RNF111 ring finger protein 111
RNF139 ring finger protein 139
RNF150 ring finger protein 150
RNF41 ring finger protein 41, E3 ubiquitin protein ligase
RPRD2 regulation of nuclear pre-mRNA domain containing 2
RSBN1 round spermatid basic protein 1
RSBN1L round spermatid basic protein 1-like
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
RXRA retinoid X receptor, alpha
SAMHD1 SAM domain and HD domain 1
SELL selectin L
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SENP8 SUMO/sentrin specific peptidase family member 8
SEPT2 septin 2
SERINC5 serine incorporator 5
SGMS1 sphingomyelin synthase 1
SH3RF1 SH3 domain containing ring finger 1
SIK3 SIK family kinase 3
SIX1 SIX homeobox 1
SIX4 SIX homeobox 4
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC25A40 solute carrier family 25, member 40
SMCP sperm mitochondria-associated cysteine-rich protein
SMOC1 SPARC related modular calcium binding 1
SNORA2B small nucleolar RNA, H/ACA box 2B
SNORA45A small nucleolar RNA, H/ACA box 45A
SOX2-OT SOX2 overlapping transcript
SP4 Sp4 transcription factor
STK17B serine/threonine kinase 17b
STOX1 storkhead box 1
STX12 syntaxin 12
SYNE3 spectrin repeat containing, nuclear envelope family member 3
TAAR2 trace amine associated receptor 2
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TCP11L2 t-complex 11, testis-specific-like 2
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor)
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2)
THRA thyroid hormone receptor, alpha
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
TNR tenascin R
TNRC6B trinucleotide repeat containing 6B
TOR1AIP1 torsin A interacting protein 1
TOX2 TOX high mobility group box family member 2
TRIM60 tripartite motif containing 60
TRIQK triple QxxK/R motif containing
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae)
TRPS1 trichorhinophalangeal syndrome I
TSHB thyroid stimulating hormone, beta
TSHR thyroid stimulating hormone receptor
TTC5 tetratricopeptide repeat domain 5
UBE3A ubiquitin protein ligase E3A
UBQLN2 ubiquilin 2
UBR5 ubiquitin protein ligase E3 component n-recognin 5
USP3 ubiquitin specific peptidase 3
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast)
VPS13B vacuolar protein sorting 13 homolog B (yeast)
WDFY3 WD repeat and FYVE domain containing 3
WDFY3-AS2 WDFY3 antisense RNA 2
WDR3 WD repeat domain 3
WDR48 WD repeat domain 48
WFDC11 WAP four-disulfide core domain 11
XPO7 exportin 7
ZBTB18 zinc finger and BTB domain containing 18
ZBTB39 zinc finger and BTB domain containing 39
ZBTB44 zinc finger and BTB domain containing 44
ZFR zinc finger RNA binding protein
ZHX1 zinc fingers and homeoboxes 1
ZHX2 zinc fingers and homeoboxes 2
ZHX3 zinc fingers and homeoboxes 3
ZKSCAN4 zinc finger with KRAB and SCAN domains 4
ZMYND8 zinc finger, MYND-type containing 8
ZNF134 zinc finger protein 134
ZNF14 zinc finger protein 14
ZNF148 zinc finger protein 148
ZNF16 zinc finger protein 16
ZNF175 zinc finger protein 175
ZNF223 zinc finger protein 223
ZNF227 zinc finger protein 227
ZNF250 zinc finger protein 250
ZNF260 zinc finger protein 260
ZNF264 zinc finger protein 264
ZNF281 zinc finger protein 281
ZNF287 zinc finger protein 287
ZNF304 zinc finger protein 304
ZNF395 zinc finger protein 395
ZNF41 zinc finger protein 41
ZNF416 zinc finger protein 416
ZNF420 zinc finger protein 420
ZNF430 zinc finger protein 430
ZNF462 zinc finger protein 462
ZNF480 zinc finger protein 480
ZNF484 zinc finger protein 484
ZNF525 zinc finger protein 525
ZNF542P zinc finger protein 542, pseudogene
ZNF551 zinc finger protein 551
ZNF552 zinc finger protein 552
ZNF569 zinc finger protein 569
ZNF573 zinc finger protein 573
ZNF585A zinc finger protein 585A
ZNF585B zinc finger protein 585B
ZNF597 zinc finger protein 597
ZNF610 zinc finger protein 610
ZNF614 zinc finger protein 614
ZNF615 zinc finger protein 615
ZNF616 zinc finger protein 616
ZNF619 zinc finger protein 619
ZNF620 zinc finger protein 620
ZNF623 zinc finger protein 623
ZNF627 zinc finger protein 627
ZNF644 zinc finger protein 644
ZNF671 zinc finger protein 671
ZNF675 zinc finger protein 675
ZNF677 zinc finger protein 677
ZNF772 zinc finger protein 772
ZNF780A zinc finger protein 780A
ZNF791 zinc finger protein 791
ZNF792 zinc finger protein 792
ZNF804A zinc finger protein 804A
ZNF813 zinc finger protein 813
ZNF816 zinc finger protein 816
ZNF827 zinc finger protein 827
ZNF836 zinc finger protein 836
ZNF845 zinc finger protein 845
ZSCAN20 zinc finger and SCAN domain containing 20
ZSWIM5 zinc finger, SWIM-type containing 5
ZSWIM6 zinc finger, SWIM-type containing 6

low expression

Symbol Name
ACP1 acid phosphatase 1, soluble
AKAP17A A kinase (PRKA) anchor protein 17A
CTDP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
ORAOV1 oral cancer overexpressed 1
PEX10 peroxisomal biogenesis factor 10
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae)
SRP19 signal recognition particle 19kDa
TXNDC15 thioredoxin domain containing 15