Brain Lower Grade Glioma_LGG_TCGA-DU-A7TI-01A-11R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

415 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DU-A7TI-01A-11R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL4 arylacetamide deacetylase-like 4
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase
ACKR3 atypical chemokine receptor 3
ACSM4 acyl-CoA synthetase medium-chain family member 4
ADRA2A adrenoceptor alpha 2A
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AKAP3 A kinase (PRKA) anchor protein 3
ALMS1P Alstrom syndrome 1 pseudogene
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1
APOL6 apolipoprotein L, 6
AQP12A aquaporin 12A
ARC activity-regulated cytoskeleton-associated protein
ARHGAP6 Rho GTPase activating protein 6
ARID5B AT rich interactive domain 5B (MRF1-like)
ARL5B ADP-ribosylation factor-like 5B
ASCL3 achaete-scute family bHLH transcription factor 3
ATF3 activating transcription factor 3
ATN1 atrophin 1
AURKAPS1 aurora kinase A pseudogene 1
AZIN1 antizyme inhibitor 1
B3GALT5 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
BAG3 BCL2-associated athanogene 3
BCL2A1 BCL2-related protein A1
BHLHE40 basic helix-loop-helix family, member e40
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BTG2 BTG family, member 2
C10ORF91 chromosome 10 open reading frame 91
C17ORF107 chromosome 17 open reading frame 107
C1ORF146 chromosome 1 open reading frame 146
C2ORF69 chromosome 2 open reading frame 69
C3ORF58 chromosome 3 open reading frame 58
C4ORF51 chromosome 4 open reading frame 51
C5AR1 complement component 5a receptor 1
C5AR2 complement component 5a receptor 2
C5ORF58 chromosome 5 open reading frame 58
C6ORF25 chromosome 6 open reading frame 25
C9ORF153 chromosome 9 open reading frame 153
C9ORF66 chromosome 9 open reading frame 66
CAGE1 cancer antigen 1
CAPNS2 calpain, small subunit 2
CASS4 Cas scaffolding protein family member 4
CBWD5 COBW domain containing 5
CCDC7 coiled-coil domain containing 7
CCL2 chemokine (C-C motif) ligand 2
CCL3 chemokine (C-C motif) ligand 3
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCL3L3 chemokine (C-C motif) ligand 3-like 3
CCL4 chemokine (C-C motif) ligand 4
CCL4L2 chemokine (C-C motif) ligand 4-like 2
CCNH cyclin H
CCNL1 cyclin L1
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae)
CD300LB CD300 molecule-like family member b
CD38 CD38 molecule
CD69 CD69 molecule
CD83 CD83 molecule
CDCP2 CUB domain containing protein 2
CEP70 centrosomal protein 70kDa
CFAP20 cilia and flagella associated protein 20
CH25H cholesterol 25-hydroxylase
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CHSY1 chondroitin sulfate synthase 1
CLEC7A C-type lectin domain family 7, member A
CNBD1 cyclic nucleotide binding domain containing 1
CNGA2 cyclic nucleotide gated channel alpha 2
COQ10B coenzyme Q10 homolog B (S. cerevisiae)
COX7B2 cytochrome c oxidase subunit VIIb2
CSF1 colony stimulating factor 1 (macrophage)
CSRNP1 cysteine-serine-rich nuclear protein 1
CSTL1 cystatin-like 1
CTSH cathepsin H
CXCL2 chemokine (C-X-C motif) ligand 2
CXCL3 chemokine (C-X-C motif) ligand 3
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYR61 cysteine-rich, angiogenic inducer, 61
DCBLD2 discoidin, CUB and LCCL domain containing 2
DCUN1D3 DCN1, defective in cullin neddylation 1, domain containing 3
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like
DEFB109P1B defensin, beta 109, pseudogene 1B
DKK4 dickkopf WNT signaling pathway inhibitor 4
DLEU2L deleted in lymphocytic leukemia 2-like
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DPEP3 dipeptidase 3
DPPA3 developmental pluripotency associated 3
DUSP5 dual specificity phosphatase 5
DYNAP dynactin associated protein
EAF2 ELL associated factor 2
EGR1 early growth response 1
EGR2 early growth response 2
EGR3 early growth response 3
EHD1 EH-domain containing 1
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
EIF3C eukaryotic translation initiation factor 3, subunit C
ELL2 elongation factor, RNA polymerase II, 2
ELMSAN1 ELM2 and Myb/SANT-like domain containing 1
EMP1 epithelial membrane protein 1
EQTN equatorin, sperm acrosome associated
ERC1 ELKS/RAB6-interacting/CAST family member 1
ERF Ets2 repressor factor
ERICH6 glutamate-rich 6
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
EVPLL envoplakin-like
FABP5P3 fatty acid binding protein 5 pseudogene 3
FAM212B family with sequence similarity 212, member B
FAM53C family with sequence similarity 53, member C
FAM71A family with sequence similarity 71, member A
FBXL14 F-box and leucine-rich repeat protein 14
FBXO33 F-box protein 33
FCAR Fc fragment of IgA receptor
FFAR3 free fatty acid receptor 3
FGF2 fibroblast growth factor 2 (basic)
FGF4 fibroblast growth factor 4
FKSG29 FKSG29
FOS FBJ murine osteosarcoma viral oncogene homolog
FOSB FBJ murine osteosarcoma viral oncogene homolog B
FOSL2 FOS-like antigen 2
FPR1 formyl peptide receptor 1
FRG2B FSHD region gene 2 family, member B
FRG2C FSHD region gene 2 family, member C
GADD45A growth arrest and DNA-damage-inducible, alpha
GADD45B growth arrest and DNA-damage-inducible, beta
GALNT8 polypeptide N-acetylgalactosaminyltransferase 8
GBP7 guanylate binding protein 7
GBX2 gastrulation brain homeobox 2
GCH1 GTP cyclohydrolase 1
GDF10 growth differentiation factor 10
GDF2 growth differentiation factor 2
GEM GTP binding protein overexpressed in skeletal muscle
GK2 glycerol kinase 2
GNA13 guanine nucleotide binding protein (G protein), alpha 13
GOLGA8EP golgin A8 family, member E, pseudogene
GPR119 G protein-coupled receptor 119
GPR132 G protein-coupled receptor 132
GPR152 G protein-coupled receptor 152
GPR183 G protein-coupled receptor 183
GRASP GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
GRM1 glutamate receptor, metabotropic 1
GTF2A1L general transcription factor IIA, 1-like
GTF2B general transcription factor IIB
H3F3B H3 histone, family 3B (H3.3B)
HAS2 hyaluronan synthase 2
HAS2-AS1 HAS2 antisense RNA 1
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like
HUS1B HUS1 checkpoint homolog b (S. pombe)
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
IER2 immediate early response 2
IFFO2 intermediate filament family orphan 2
IFI44 interferon-induced protein 44
IFIT1 interferon-induced protein with tetratricopeptide repeats 1
IFIT2 interferon-induced protein with tetratricopeptide repeats 2
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFIT5 interferon-induced protein with tetratricopeptide repeats 5
IL12A interleukin 12A
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL27 interleukin 27
IL4 interleukin 4
IL9 interleukin 9
ING1 inhibitor of growth family, member 1
IRAK2 interleukin-1 receptor-associated kinase 2
IRF1 interferon regulatory factor 1
IRF2BP2 interferon regulatory factor 2 binding protein 2
IRF2BPL interferon regulatory factor 2 binding protein-like
ITFG2 integrin alpha FG-GAP repeat containing 2
ITGAX integrin, alpha X (complement component 3 receptor 4 subunit)
ITPKC inositol-trisphosphate 3-kinase C
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2
ITPRIP inositol 1,4,5-trisphosphate receptor interacting protein
IVL involucrin
JDP2 Jun dimerization protein 2
JOSD1 Josephin domain containing 1
JUN jun proto-oncogene
JUNB jun B proto-oncogene
JUND jun D proto-oncogene
KBTBD8 kelch repeat and BTB (POZ) domain containing 8
KCNA6 potassium channel, voltage gated shaker related subfamily A, member 6
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNK16 potassium channel, two pore domain subfamily K, member 16
KCNK18 potassium channel, two pore domain subfamily K, member 18
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KCTD6 potassium channel tetramerization domain containing 6
KDM5A lysine (K)-specific demethylase 5A
KDM6B lysine (K)-specific demethylase 6B
KIAA0226 KIAA0226
KIAA1958 KIAA1958
KIR3DX1 killer cell immunoglobulin-like receptor, three domains, X1
KLF10 Kruppel-like factor 10
KLF4 Kruppel-like factor 4 (gut)
KLF6 Kruppel-like factor 6
KLF7 Kruppel-like factor 7 (ubiquitous)
KLF9 Kruppel-like factor 9
KLHL15 kelch-like family member 15
KLHL6 kelch-like family member 6
KLK12 kallikrein-related peptidase 12
KLK9 kallikrein-related peptidase 9
KLRC3 killer cell lectin-like receptor subfamily C, member 3
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KRT28 keratin 28, type I
KRTAP3-3 keratin associated protein 3-3
KRTAP5-11 keratin associated protein 5-11
KRTAP5-3 keratin associated protein 5-3
KRTAP9-9 keratin associated protein 9-9
LCE2C late cornified envelope 2C
LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
LINC01553 long intergenic non-protein coding RNA 1553
LOC283856 uncharacterized LOC283856
LOC340357 uncharacterized LOC340357
LOC644145 exocyst complex component 1 pseudogene
LOC729609 uncharacterized LOC729609
LOC90834
LOC91450 uncharacterized LOC91450
LUZP2 leucine zipper protein 2
LUZP4 leucine zipper protein 4
LYPD2 LY6/PLAUR domain containing 2
MACF1 microtubule-actin crosslinking factor 1
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
MAGEB4 melanoma antigen family B4
MAP3K8 mitogen-activated protein kinase kinase kinase 8
MCL1 myeloid cell leukemia 1
MIDN midnolin
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MSLN mesothelin
MYBPC3 myosin binding protein C, cardiac
MYC v-myc avian myelocytomatosis viral oncogene homolog
NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
NEDD9 neural precursor cell expressed, developmentally down-regulated 9
NFIL3 nuclear factor, interleukin 3 regulated
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NIPSNAP3B nipsnap homolog 3B (C. elegans)
NKX3-1 NK3 homeobox 1
NLRP3 NLR family, pyrin domain containing 3
NR4A1 nuclear receptor subfamily 4, group A, member 1
NR4A2 nuclear receptor subfamily 4, group A, member 2
NR4A3 nuclear receptor subfamily 4, group A, member 3
NRARP NOTCH-regulated ankyrin repeat protein
NRBF2 nuclear receptor binding factor 2
NRROS negative regulator of reactive oxygen species
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1
OR13H1 olfactory receptor, family 13, subfamily H, member 1
OR2B11 olfactory receptor, family 2, subfamily B, member 11
OR2M1P olfactory receptor, family 2, subfamily M, member 1 pseudogene
OR4K2 olfactory receptor, family 4, subfamily K, member 2
OR4K5 olfactory receptor, family 4, subfamily K, member 5
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR52A4P olfactory receptor, family 52, subfamily A, member 4, pseudogene
OR5AU1 olfactory receptor, family 5, subfamily AU, member 1
OR5B17 olfactory receptor, family 5, subfamily B, member 17
OR6M1 olfactory receptor, family 6, subfamily M, member 1
OSM oncostatin M
OVOL1 ovo-like zinc finger 1
P2RY4 pyrimidinergic receptor P2Y, G-protein coupled, 4
PADI1 peptidyl arginine deiminase, type I
PADI3 peptidyl arginine deiminase, type III
PADI6 peptidyl arginine deiminase, type VI
PARP11 poly (ADP-ribose) polymerase family, member 11
PATE3 prostate and testis expressed 3
PDE4B phosphodiesterase 4B, cAMP-specific
PDGFB platelet-derived growth factor beta polypeptide
PER2 period circadian clock 2
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
PIGA phosphatidylinositol glycan anchor biosynthesis, class A
PIM1 Pim-1 proto-oncogene, serine/threonine kinase
PKDREJ polycystin (PKD) family receptor for egg jelly
PLET1 placenta expressed transcript 1
PLK3 polo-like kinase 3
POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J2
PP2D1 protein phosphatase 2C-like domain containing 1
PPP1R14D protein phosphatase 1, regulatory (inhibitor) subunit 14D
PPP1R15A protein phosphatase 1, regulatory subunit 15A
PPP1R2P1 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 1
PPP1R3B protein phosphatase 1, regulatory subunit 3B
PPY2P pancreatic polypeptide 2, pseudogene
PRMT9 protein arginine methyltransferase 9
PRO0611 PRO0611 protein
PSG3 pregnancy specific beta-1-glycoprotein 3
RAB20 RAB20, member RAS oncogene family
RAD21L1 RAD21-like 1 (S. pombe)
RAD51B RAD51 paralog B
RAD52 RAD52 homolog (S. cerevisiae)
RANBP2 RAN binding protein 2
RASD1 RAS, dexamethasone-induced 1
RASGEF1B RasGEF domain family, member 1B
RASSF5 Ras association (RalGDS/AF-6) domain family member 5
RBBP6 retinoblastoma binding protein 6
RBMXL1 RNA binding motif protein, X-linked-like 1
REC114 REC114 meiotic recombination protein
REL v-rel avian reticuloendotheliosis viral oncogene homolog
RET ret proto-oncogene
RGS1 regulator of G-protein signaling 1
RGS13 regulator of G-protein signaling 13
RGS16 regulator of G-protein signaling 16
RGS2 regulator of G-protein signaling 2
RHOH ras homolog family member H
RILPL2 Rab interacting lysosomal protein-like 2
RIMKLB ribosomal modification protein rimK-like family member B
RIN2 Ras and Rab interactor 2
RIPK2 receptor-interacting serine-threonine kinase 2
RND1 Rho family GTPase 1
RNF113B ring finger protein 113B
RNF148 ring finger protein 148
RNF182 ring finger protein 182
RNF217 ring finger protein 217
RPA4 replication protein A4, 30kDa
RPL23AP64 ribosomal protein L23a pseudogene 64
RPL36A ribosomal protein L36a
SAT1 spermidine/spermine N1-acetyltransferase 1
SCARNA12 small Cajal body-specific RNA 12
SCARNA21 small Cajal body-specific RNA 21
SCARNA8 small Cajal body-specific RNA 8
SCN11A sodium channel, voltage gated, type XI alpha subunit
SCP2D1 SCP2 sterol-binding domain containing 1
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SERPINB12 serpin peptidase inhibitor, clade B (ovalbumin), member 12
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SERTAD1 SERTA domain containing 1
SGCZ sarcoglycan, zeta
SH2B3 SH2B adaptor protein 3
SH3TC1 SH3 domain and tetratricopeptide repeats 1
SIGLEC11 sialic acid binding Ig-like lectin 11
SIGLECL1 SIGLEC family like 1
SIK1 salt-inducible kinase 1
SKIL SKI-like proto-oncogene
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC22A14 solute carrier family 22, member 14
SLC25A25 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
SLC25A32 solute carrier family 25 (mitochondrial folate carrier), member 32
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33
SLC2A14 solute carrier family 2 (facilitated glucose transporter), member 14
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3
SLC34A3 solute carrier family 34 (type II sodium/phosphate cotransporter), member 3
SMAD7 SMAD family member 7
SMCP sperm mitochondria-associated cysteine-rich protein
SMIM21 small integral membrane protein 21
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA25 small nucleolar RNA, H/ACA box 25
SNORA52 small nucleolar RNA, H/ACA box 52
SNORA61 small nucleolar RNA, H/ACA box 61
SNORA67 small nucleolar RNA, H/ACA box 67
SNORA72 small nucleolar RNA, H/ACA box 72
SNORA76C small nucleolar RNA, H/ACA box 76C
SNORA77 small nucleolar RNA, H/ACA box 77
SNORA79 small nucleolar RNA, H/ACA box 79
SNORA81 small nucleolar RNA, H/ACA box 81
SNORD1C small nucleolar RNA, C/D box 1C
SOCS3 suppressor of cytokine signaling 3
SOX5 SRY (sex determining region Y)-box 5
SOX9 SRY (sex determining region Y)-box 9
SPATA31E1 SPATA31 subfamily E, member 1
SPIB Spi-B transcription factor (Spi-1/PU.1 related)
SPRY2 sprouty homolog 2 (Drosophila)
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SRGN serglycin
SRSF7 serine/arginine-rich splicing factor 7
STAT1 signal transducer and activator of transcription 1, 91kDa
STX11 syntaxin 11
SYAP1 synapse associated protein 1
TEX38 testis expressed 38
THEMIS2 thymocyte selection associated family member 2
TIPARP TCDD-inducible poly(ADP-ribose) polymerase
TMEM211 transmembrane protein 211
TMEM89 transmembrane protein 89
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFAIP8L3 tumor necrosis factor, alpha-induced protein 8-like 3
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C
TNFSF9 tumor necrosis factor (ligand) superfamily, member 9
TOMM20L translocase of outer mitochondrial membrane 20 homolog (yeast)-like
TRA2B transformer 2 beta homolog (Drosophila)
TRIB1 tribbles pseudokinase 1
TRPM5 transient receptor potential cation channel, subfamily M, member 5
TSC22D2 TSC22 domain family, member 2
TSHB thyroid stimulating hormone, beta
TSPO2 translocator protein 2
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
UBE2J1 ubiquitin-conjugating enzyme E2, J1
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6
VCX3B variable charge, X-linked 3B
WNK1 WNK lysine deficient protein kinase 1
XIRP1 xin actin binding repeat containing 1
ZC3H12A zinc finger CCCH-type containing 12A
ZC3HAV1 zinc finger CCCH-type, antiviral 1
ZFAND5 zinc finger, AN1-type domain 5
ZFP36 ZFP36 ring finger protein
ZFP36L1 ZFP36 ring finger protein-like 1
ZFP36L2 ZFP36 ring finger protein-like 2
ZNF225 zinc finger protein 225
ZNF226 zinc finger protein 226
ZNF234 zinc finger protein 234
ZNF331 zinc finger protein 331
ZNF460 zinc finger protein 460
ZNF804A zinc finger protein 804A
ZNF808 zinc finger protein 808
ZPBP zona pellucida binding protein
ZPBP2 zona pellucida binding protein 2

low expression

Symbol Name
PEX11B peroxisomal biogenesis factor 11 beta
ZC3H10 zinc finger CCCH-type containing 10
ZNF174 zinc finger protein 174
ZNF2 zinc finger protein 2
ZNF564 zinc finger protein 564
ZNF879 zinc finger protein 879
ZSWIM3 zinc finger, SWIM-type containing 3