Brain Lower Grade Glioma_LGG_TCGA-DU-7304-01A-12R-2090-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

228 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DU-7304-01A-12R-2090-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACBD5 acyl-CoA binding domain containing 5
ACER2 alkaline ceramidase 2
ACSM6 acyl-CoA synthetase medium-chain family member 6
ADAM20 ADAM metallopeptidase domain 20
ADAMTSL3 ADAMTS-like 3
ADCY2 adenylate cyclase 2 (brain)
ADGRF2 adhesion G protein-coupled receptor F2
ADGRF5 adhesion G protein-coupled receptor F5
AHNAK AHNAK nucleoprotein
AMOTL1 angiomotin like 1
ANKUB1 ankyrin repeat and ubiquitin domain containing 1
ANXA10 annexin A10
ANXA8L1 annexin A8-like 1
AQP7P1 aquaporin 7 pseudogene 1
ARGFX arginine-fifty homeobox
ARHGAP42 Rho GTPase activating protein 42
ARHGAP5 Rho GTPase activating protein 5
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10
ARMC3 armadillo repeat containing 3
ARRB1 arrestin, beta 1
ARSG arylsulfatase G
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ASPH aspartate beta-hydroxylase
ATXN8OS ATXN8 opposite strand (non-protein coding)
BEND2 BEN domain containing 2
BTBD8 BTB (POZ) domain containing 8
C10ORF12 chromosome 10 open reading frame 12
C11ORF54 chromosome 11 open reading frame 54
C17ORF77 chromosome 17 open reading frame 77
C1ORF94 chromosome 1 open reading frame 94
C9ORF9 chromosome 9 open reading frame 9
CAB39L calcium binding protein 39-like
CACNG6 calcium channel, voltage-dependent, gamma subunit 6
CALR3 calreticulin 3
CCDC186 coiled-coil domain containing 186
CCDC40 coiled-coil domain containing 40
CCDC70 coiled-coil domain containing 70
CCDC87 coiled-coil domain containing 87
CDC14A cell division cycle 14A
CDNF cerebral dopamine neurotrophic factor
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CEACAM8 carcinoembryonic antigen-related cell adhesion molecule 8
CFAP54 cilia and flagella associated 54
CFHR4 complement factor H-related 4
CLDN25 claudin 25
CNTN1 contactin 1
COX11 COX11 cytochrome c oxidase copper chaperone
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1
CSPP1 centrosome and spindle pole associated protein 1
CT45A4 cancer/testis antigen family 45, member A4
CUL5 cullin 5
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR2 chemokine (C-X-C motif) receptor 2
CYP2J2 cytochrome P450, family 2, subfamily J, polypeptide 2
DCHS2 dachsous cadherin-related 2
DLEC1 deleted in lung and esophageal cancer 1
DPYSL2 dihydropyrimidinase-like 2
DUSP21 dual specificity phosphatase 21
DYNAP dynactin associated protein
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
EFCAB6 EF-hand calcium binding domain 6
ERN1 endoplasmic reticulum to nucleus signaling 1
FAM221B family with sequence similarity 221, member B
FAM227B family with sequence similarity 227, member B
FAM229B family with sequence similarity 229, member B
FAT3 FAT atypical cadherin 3
FBXO47 F-box protein 47
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
FFAR2 free fatty acid receptor 2
FLNB filamin B, beta
FN3KRP fructosamine 3 kinase related protein
FRG2 FSHD region gene 2
FRG2B FSHD region gene 2 family, member B
FRG2C FSHD region gene 2 family, member C
FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase)
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type
GDF7 growth differentiation factor 7
GJA1 gap junction protein, alpha 1, 43kDa
GK2 glycerol kinase 2
GNA13 guanine nucleotide binding protein (G protein), alpha 13
GOLGA2P3Y golgin A2 pseudogene 3, Y-linked
GPR135 G protein-coupled receptor 135
H3F3C H3 histone, family 3C
HELZ helicase with zinc finger
HIPK3 homeodomain interacting protein kinase 3
KAT6A K(lysine) acetyltransferase 6A
KCNK18 potassium channel, two pore domain subfamily K, member 18
KDM1B lysine (K)-specific demethylase 1B
KIF27 kinesin family member 27
LEPR leptin receptor
LINC00314 long intergenic non-protein coding RNA 314
LINC00469 long intergenic non-protein coding RNA 469
LINC00696 long intergenic non-protein coding RNA 696
LMNTD1 lamin tail domain containing 1
LOC148696 uncharacterized LOC148696
LPP LIM domain containing preferred translocation partner in lipoma
LRTOMT leucine rich transmembrane and O-methyltransferase domain containing
MAP3K19 mitogen-activated protein kinase kinase kinase 19
MAP3K3 mitogen-activated protein kinase kinase kinase 3
MAP6 microtubule-associated protein 6
MED13 mediator complex subunit 13
MEPE matrix extracellular phosphoglycoprotein
METTL12 methyltransferase like 12
MKRN2 makorin ring finger protein 2
MMEL1 membrane metallo-endopeptidase-like 1
MMP16 matrix metallopeptidase 16 (membrane-inserted)
MRGPRD MAS-related GPR, member D
MS4A12 membrane-spanning 4-domains, subfamily A, member 12
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit
NCOA2 nuclear receptor coactivator 2
NEBL nebulette
NEU3 sialidase 3 (membrane sialidase)
NFE2 nuclear factor, erythroid 2
NFRKB nuclear factor related to kappaB binding protein
NLRP12 NLR family, pyrin domain containing 12
NLRP5 NLR family, pyrin domain containing 5
NMT2 N-myristoyltransferase 2
NOP14-AS1 NOP14 antisense RNA 1
NRIP1 nuclear receptor interacting protein 1
OCLN occludin
OOEP oocyte expressed protein
OPN4 opsin 4
OR13C8 olfactory receptor, family 13, subfamily C, member 8
OR1L3 olfactory receptor, family 1, subfamily L, member 3
OR2F2 olfactory receptor, family 2, subfamily F, member 2
OR2T6 olfactory receptor, family 2, subfamily T, member 6
OR4E2 olfactory receptor, family 4, subfamily E, member 2
OR5V1 olfactory receptor, family 5, subfamily V, member 1
OR6C6 olfactory receptor, family 6, subfamily C, member 6
P2RY12 purinergic receptor P2Y, G-protein coupled, 12
P2RY14 purinergic receptor P2Y, G-protein coupled, 14
PACRG PARK2 co-regulated
PARD3B par-3 family cell polarity regulator beta
PCDHA12 protocadherin alpha 12
PCDHB16 protocadherin beta 16
PCDHGA4 protocadherin gamma subfamily A, 4
PCDHGB5 protocadherin gamma subfamily B, 5
PCGF5 polycomb group ring finger 5
PCM1 pericentriolar material 1
PDE4DIP phosphodiesterase 4D interacting protein
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3
PLEC plectin
PLEKHA5 pleckstrin homology domain containing, family A member 5
PLEKHG7 pleckstrin homology domain containing, family G (with RhoGef domain) member 7
PMCHL1 pro-melanin-concentrating hormone-like 1, pseudogene
PPARA peroxisome proliferator-activated receptor alpha
PPP1R12B protein phosphatase 1, regulatory subunit 12B
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PRKCA protein kinase C, alpha
PRKX protein kinase, X-linked
PRTG protogenin
QRFPR pyroglutamylated RFamide peptide receptor
RAB30 RAB30, member RAS oncogene family
RAB4A RAB4A, member RAS oncogene family
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RANBP3L RAN binding protein 3-like
RARB retinoic acid receptor, beta
RGPD5 RANBP2-like and GRIP domain containing 5
RGS5 regulator of G-protein signaling 5
RNF113B ring finger protein 113B
RNF169 ring finger protein 169
RNF32 ring finger protein 32
ROCK1 Rho-associated, coiled-coil containing protein kinase 1
RPS4Y2 ribosomal protein S4, Y-linked 2
RPTOR regulatory associated protein of MTOR, complex 1
S100A12 S100 calcium binding protein A12
SCN7A sodium channel, voltage gated, type VII alpha subunit
SEBOX SEBOX homeobox
SFMBT2 Scm-like with four mbt domains 2
SGPP2 sphingosine-1-phosphate phosphatase 2
SHE Src homology 2 domain containing E
SIK2 salt-inducible kinase 2
SLC19A3 solute carrier family 19 (thiamine transporter), member 3
SLC24A4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
SLC6A12 solute carrier family 6 (neurotransmitter transporter), member 12
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
SPAG11A sperm associated antigen 11A
SPAG9 sperm associated antigen 9
SPESP1 sperm equatorial segment protein 1
STIM1 stromal interaction molecule 1
STON1-GTF2A1L STON1-GTF2A1L readthrough
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4
SUMO4 small ubiquitin-like modifier 4
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TAS2R3 taste receptor, type 2, member 3
TAS2R40 taste receptor, type 2, member 40
TBC1D16 TBC1 domain family, member 16
TDGF1 teratocarcinoma-derived growth factor 1
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TDRD5 tudor domain containing 5
TECRL trans-2,3-enoyl-CoA reductase-like
TEX13B testis expressed 13B
TINCR tissue differentiation-inducing non-protein coding RNA
TMEM107 transmembrane protein 107
TMEM233 transmembrane protein 233
TMEM82 transmembrane protein 82
TMTC1 transmembrane and tetratricopeptide repeat containing 1
TOB1 transducer of ERBB2, 1
TRIM40 tripartite motif containing 40
UHMK1 U2AF homology motif (UHM) kinase 1
USP17L2 ubiquitin specific peptidase 17-like family member 2
USP25 ubiquitin specific peptidase 25
UTRN utrophin
VPS13B vacuolar protein sorting 13 homolog B (yeast)
VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae)
WFDC13 WAP four-disulfide core domain 13
ZBTB10 zinc finger and BTB domain containing 10
ZBTB4 zinc finger and BTB domain containing 4
ZC3H12C zinc finger CCCH-type containing 12C
ZDHHC2 zinc finger, DHHC-type containing 2
ZFHX4 zinc finger homeobox 4
ZMYND11 zinc finger, MYND-type containing 11
ZNF395 zinc finger protein 395
ZNF438 zinc finger protein 438
ZNF487 zinc finger protein 487
ZNF772 zinc finger protein 772

low expression

Symbol Name
COPS7B COP9 signalosome subunit 7B
CTDP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
DIS3L2 DIS3 like 3'-5' exoribonuclease 2
EIF4E2 eukaryotic translation initiation factor 4E family member 2
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
PPIL3 peptidylprolyl isomerase (cyclophilin)-like 3
SDHAF4 succinate dehydrogenase complex assembly factor 4
ZNF630 zinc finger protein 630